New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)10 (0.090) 8/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 162 total aligned reads displayed.

ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990
                                                                                                   |                                                                                                   
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                     >  2:2941822/1‑100 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  2:1966463‑M2/1‑99 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  2:2103909‑M2/1‑99 (MQ=255)
  cgtacaCGGAGTAGGGGTTTCTTCACGTTTGTTGGAGGTGCCGAAGCTGGAGATGGGCTATTTTGAGTGAAATATCAGTCCGGATGCGGCTGCGCCTTAt                                                                                                   >  1:1259131/6‑100 (MQ=255)
  cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                   <  1:141936‑M2/100‑3 (MQ=255)
  cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                   <  2:2200563‑M2/100‑3 (MQ=255)
   gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:3259889‑M2/100‑4 (MQ=255)
       aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                              >  1:2794113‑M2/1‑93 (MQ=255)
       aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                              >  2:3206493‑M2/1‑93 (MQ=255)
       aCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggc                                                                                              >  1:771754‑M2/1‑93 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                             <  1:1953929‑M2/100‑9 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                             >  1:2061420‑M2/1‑92 (MQ=255)
         acattAGTGGTTTCTTCACGTTTTTTTAAGGTGCTGAAACTGGATATGGACTATTTTGAGTTAAATATTTGTACGGATGCGGCTGCGCCTTAtt                                                                                                  <  1:1267200/90‑2 (MQ=255)
          aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                           >  1:1114597/1‑100 (MQ=255)
             tAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATaa                                                                                        >  2:1699137/1‑100 (MQ=255)
              aGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAc                                                                                       >  2:1176203/1‑100 (MQ=255)
                gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                                     <  1:312138/100‑1 (MQ=255)
                gggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAccc                                                                                     <  1:312026/100‑1 (MQ=255)
                     tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATAGCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                                <  1:1164159/100‑1 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                               >  1:2473411/1‑100 (MQ=255)
                      cttcACGTTTGTTGAAGGTGCCGAAACTCGATATTGACTATTTTGAGTGAAATATCAGGCCCGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACt                                                                               <  1:485756/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                              >  1:1095340/1‑100 (MQ=255)
                        tcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTTAGTGAAATATCATGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTc                                                                             <  1:864991/100‑1 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            <  2:2513245/100‑1 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            >  1:1658687/1‑100 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            >  1:3042202/1‑100 (MQ=255)
                          aCGTTTGTGGAAGGTGCCGAAACTGGATAGTGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            <  1:1036044/99‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCTGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                          <  1:1896628/100‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                          >  1:3452275/1‑100 (MQ=255)
                              ttgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAc                                                                       <  1:3513777/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAGTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     >  1:1943833/1‑100 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     <  2:416134/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     <  1:3291881/100‑1 (MQ=255)
                                  tgAAGGTGGCGAAACTGGATATGGACTATTTTGAGGGGAATATCAGGGCGGATGGGGCTGCGCCTTATCCGGTCCATAACCCCTTACTTCCTCAAcccc                                                                    >  1:1467014/1‑99 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                   >  1:1734589/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGc                                                                  >  2:2580306/1‑100 (MQ=255)
                                    aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                                 <  1:2203223/100‑1 (MQ=255)
                                    aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                                 <  1:2205599/100‑1 (MQ=255)
                                    aaGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCa                                                                 >  1:1363667/1‑100 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                            >  2:2990502/1‑100 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                            >  2:1405758/1‑100 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                           >  2:1310220/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                          <  2:3458031/100‑1 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                          >  2:1840935/1‑100 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                         >  2:2375862/1‑100 (MQ=255)
                                            gAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGc                                                         >  2:2549009/1‑100 (MQ=255)
                                              aaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGccc                                                       <  1:1876463/100‑1 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  <  1:3251660/100‑1 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  <  2:2721414/100‑1 (MQ=255)
                                                    atatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtct                                                 >  2:329750/1‑100 (MQ=255)
                                                     tctGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                                >  2:2412388/3‑100 (MQ=255)
                                                      atGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                               >  2:3538558/1‑100 (MQ=255)
                                                      atGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATctct                                               >  1:3177252/1‑100 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                              <  2:224493/100‑1 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                              >  1:385853/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                              <  1:1603221/99‑1 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                             >  1:3307711/1‑100 (MQ=255)
                                                         gACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcc                                            >  1:2579790/1‑100 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCACACGCAGCCCGAATCTCTtcct                                           >  1:3304005/1‑100 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                           >  2:2855252/1‑100 (MQ=255)
                                                          aCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcct                                           >  1:2479305/1‑100 (MQ=255)
                                                            tATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtcctcc                                         <  1:3359772/100‑1 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        >  2:1178906/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        <  1:3418221/100‑1 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        <  2:1591019/100‑1 (MQ=255)
                                                              ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                                       <  2:1112704/100‑1 (MQ=255)
                                                              ttttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCgg                                       >  2:742172/1‑100 (MQ=255)
                                                                ttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCa                                     <  1:893429/100‑1 (MQ=255)
                                                                   aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaa                                  <  2:3055426‑M2/100‑68 (MQ=255)
                                                                   aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCt                                  >  2:2119051/1‑100 (MQ=255)
                                                                    gTGAAATGTCACGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 >  1:1856855/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 >  1:690577/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 <  2:2222086/100‑1 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 <  2:681404/100‑1 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                               <  2:2771905/100‑1 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                               <  2:1347326/100‑1 (MQ=255)
                                                                        aaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATc                             <  1:221679/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctactt                        <  1:852128‑M2/100‑78 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttacacaaacgtgaagaaaccccaact                         <  1:1224968‑M2/99‑77 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCCGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                        >  1:807649/1‑100 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                       >  2:2560114/1‑100 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATa                       >  1:2248780/1‑100 (MQ=255)
                                                                                  cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                   <  2:1658694/100‑1 (MQ=255)
                                                                                        cGGCTTCGCCTTATCCGGCCCATAACCGCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAGACACCATCg             <  1:1236446/100‑1 (MQ=255)
                                                                                         ggCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGt            <  2:1217711/100‑1 (MQ=255)
                                                                                          gCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTg           <  2:1459551/100‑1 (MQ=255)
                                                                                           cTGCGCATTATCCGGCCCATAACCCCTTGCTTCCGCAACCCCGCAAACGCTGCCCGAATCTCTTCCCCCCGCAGCTGGGCCCCGGTAAACACCCTCGTg           >  1:1018046/1‑99 (MQ=255)
                                                                                            tGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCt         >  2:3497060/1‑100 (MQ=255)
                                                                                            tGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCt         <  2:3086491/100‑1 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       >  2:1817758/1‑100 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       <  2:3140400/100‑1 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       >  2:1518652/1‑100 (MQ=255)
                                                                                               gcCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgttttcgatcattaagt      >  2:3110848‑M2/1‑5 (MQ=255)
                                                                                               gcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg      >  2:741204/1‑100 (MQ=255)
                                                                                               gcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg      >  2:861975/1‑100 (MQ=255)
                                                                                                ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTaaga     >  1:2221673/1‑97 (MQ=255)
                                                                                                 cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCg    >  2:258798/1‑100 (MQ=255)
                                                                                                 cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCg    >  2:1032192/1‑100 (MQ=255)
                                                                                                   tATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGt  >  2:1494915/1‑100 (MQ=255)
                                                                                                   tATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGt  <  2:1410564/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.