| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,028 | 0 | T | C | 26.7% | 499.0 / 218.9 | 324 | intergenic (‑238/+70) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (122/100); new base C (79/2); total (222/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.58e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
Only 100 of 331 total aligned reads displayed.
TATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATG > NC_000913/3705929‑3706127 | taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACGTTGCAGA‑Att‑tt < 1:2545522/100‑1 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑Att‑tt < 2:922424/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCg < 1:2506486/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCg < 1:2157822/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCg < 1:1017674/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGACGGATGCGGCGTTAACGCCTTATCCGGACTAC‑AAAGTCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCg < 2:3840933/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGt > 2:3597139/1‑100 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAgg < 2:2897720/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTACAAATTCAATACATTGCAGA‑ATT‑TTCGTAgg > 2:2446772/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGcc > 1:2056876/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGAt < 2:2758982/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATa < 1:1209518/100‑1 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAg > 1:2354125/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGc < 1:3653156/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGc > 2:1945300/1‑100 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCg < 2:663491/99‑1 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGa < 1:1854034/100‑1 (MQ=255) tccgatctggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCAGG‑ACC‑AT‑GTAGGCCTGATAAGCGTAgcgc < 2:3005078/91‑1 (MQ=18) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCa < 2:1095845/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCa < 1:843644/100‑1 (MQ=255) ctttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCAGT‑TTA‑TTGGTAGGCCTGATAAgcgcagcgca > 1:2447897/9‑100 (MQ=21) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATc > 1:1990653/1‑100 (MQ=255) tgtATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCa > 2:3547255/3‑100 (MQ=255) cgtaggCCGGATAAGGCGGTCACGCCGCATCCGGCCTAC‑GAAACCGCAAGAATTCAATATATTGCAGG‑AGC‑GGTGTAGGCCTGATAAGCGTAGCGCATCa > 1:471476/6‑100 (MQ=18) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:3531786/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:1381135/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCAGA‑AAC‑CTTGTAGGCCTGATAAGCGTAGCGCATCAg > 1:927981/5‑100 (MQ=17) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCAGA‑AAC‑CTTGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:3441225/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAG‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑CGTGTAGGCCTGATAAGCGTAGCGCATCAgg > 1:2739510/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AGT‑TATGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1724317/4‑100 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAgg < 2:2006929/100‑1 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGCAGA‑AAT‑CATGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:957809/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCAAT‑CTT‑CTGGTAGGCCTGATAAGCATCGCGCATCAGGc > 2:3266462/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTGGG‑CTC‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1506232/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCAGT‑TTA‑TTGGTAGGCCTGATAAGCGCAGCGCATCAGGc > 1:3761027/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAg > 1:3628550/3‑98 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1351576/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2201857/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCATAGATC‑AT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2413389/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCAGG‑AAA‑CACGTAGGCCTGATAAGCGAAGCGCATCAGGc > 1:685846/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCAGA‑GAT‑TATGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1300363/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AGT‑TATGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3414957/3‑100 (MQ=21) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:2714300/1‑100 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:1572347/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGCAGA‑AAT‑CATGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1903404/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCAGA‑GTT‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2227626/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCAGT‑TTA‑TTGGTAGGCCTGATAAGCGCAGCGCATCAGGCa > 2:452755/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:643599/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑A‑TAT‑GACGTAGGCCTGATAAGCGTAGCGCATCAGGcga > 2:860427/2‑98 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:3505543/1‑100 (MQ=255) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:3370183/1‑100 (MQ=255) ccggataaggcgTTCACGCCGCATCCGGCCGAC‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑CGTGTAGGCCTGATAAGCGTAGCGAATCAGGCaat > 2:2550037/9‑98 (MQ=17) ccGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAttt > 2:1614247/1‑100 (MQ=18) cggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCAGA‑GTT‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGCagtt > 2:3734067/8‑97 (MQ=17) cggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCAAT‑CTT‑CTGGTAGGCCTGATAAGCATCGCGCATCAGGCaagc > 1:2079948/8‑97 (MQ=21) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCAGAGATT‑AT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 1:3005037/8‑97 (MQ=17) cggataaggcgTTCACGCCACATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCAGG‑ATA‑CGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 1:1471993/8‑97 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCAGA‑AAC‑CTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:51071/7‑100 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCAGA‑AAC‑CTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2240005/7‑100 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCAGA‑GTT‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:769351/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCGTAC‑GAAATCGTGCTAATTCAATATATTGTGGG‑CTC‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:1411618/7‑100 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCAGT‑TTA‑TTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 2:2403686/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCAGG‑AAA‑CACGTAGGCCTGATAAGCGAAGCGCATCAGGCAgttt > 2:2127903/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCAGAGATT‑AT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:60819/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AGT‑TATGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 1:486544/7‑98 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCAGG‑AGT‑TATGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 1:1554189/7‑98 (MQ=25) ggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCACA‑GCT‑AGCGTAGGCCTGATAAGCGTAGCGCATCAGGCagatt > 2:333001/7‑96 (MQ=37) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAACGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttg > 2:2337833/6‑99 (MQ=18) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGATCG‑ATC‑CACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt > 1:428618/6‑100 (MQ=21) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttg > 2:164637/6‑99 (MQ=18) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCAGG‑AGC‑TGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttg > 2:1181113/6‑99 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATTGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGTATTtttg < 2:2044357/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3269229/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1150871/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1053600/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2468697/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:2023455/1‑100 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:1261191/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:2321858/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:282471/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:2862474/1‑100 (MQ=255) aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt > 2:760196/1‑100 (MQ=255) aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt > 1:3037878/1‑100 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:2710231/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:1864006/100‑1 (MQ=255) ccTTATCCGACCTAC‑AAAATCGTGCAAATTCAATACATTGCAGC‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:317812/1‑100 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:3139111/1‑100 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1784345/1‑100 (MQ=255) aTCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatt < 1:998050/100‑1 (MQ=255) tCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta < 2:3676762/100‑1 (MQ=255) tGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:2800608/100‑1 (MQ=255) gCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 1:3561384/1‑100 (MQ=255) aaTTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 2:3019877/100‑1 (MQ=255) aTTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag > 1:664913/1‑100 (MQ=255) aTTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 2:1990638/100‑1 (MQ=255) aTTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 2:2630628/100‑1 (MQ=255) ttGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTCTTAATTATTCGATAGAGACGGTTTc > 2:219426/1‑100 (MQ=255) gCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa > 1:1403765/1‑100 (MQ=255) aTT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 2:580635/1‑100 (MQ=255) tt‑ttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt > 1:509503/1‑100 (MQ=255) | TATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCAGA‑ATT‑TTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATG > NC_000913/3705929‑3706127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |