| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 407,203 | Δ1 bp | 19.7% | intergenic (+33/‑225) | yaiA → / → aroM | OxyR‑regulated conserved protein/AroM family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 407,203 | 0 | G | . | 19.7% | 330.1 / 88.6 | 122 | intergenic (+33/‑225) | yaiA/aroM | OxyR‑regulated conserved protein/AroM family protein |
| Reads supporting (aligned to +/- strand): ref base G (46/52); new base . (10/14); total (56/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
TGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATC > NC_000913/407104‑407302 | tGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTg < 2:891942/100‑1 (MQ=255) gAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGCGGACCCTGACAACGAGTGACCTCATCAGACTGTTCGGAAGGGATTCTGAGTGc > 1:544612/1‑100 (MQ=255) gAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGc > 2:332513/1‑100 (MQ=255) aaCATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGcc < 2:905925/100‑1 (MQ=255) aaCATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGcc < 1:1268237/100‑1 (MQ=255) cATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCCCATCAGACTGCTCGGAAGGGATTCTGAGTGCCAc > 1:85627/1‑100 (MQ=255) aTCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTa > 2:753137/1‑100 (MQ=255) tCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTa > 1:2244655/1‑100 (MQ=255) cGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACa > 1:1230596/1‑100 (MQ=255) ccGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAgg > 1:783249/1‑100 (MQ=255) ccGCTCAGGAAGCGATGAATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAggg > 2:458612/1‑100 (MQ=255) gCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGa < 1:1286775/100‑1 (MQ=255) gCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGa > 1:1758564/1‑100 (MQ=255) gCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGa > 1:1761092/1‑100 (MQ=255) gCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGa > 2:601524/1‑100 (MQ=255) cTCAGGAAGCGATGGAGGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAg < 2:2180268/96‑1 (MQ=255) tCAGGACGCGATGGATGCCAACAAACGCTAAGAGGACCCTGACAACGCCTGACCGCATCCCTCCGCTCGGAAGGGATTCTGCGTGACACTACa < 2:1072885/93‑1 (MQ=255) tCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATc > 2:387420/1‑100 (MQ=255) cAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTg > 1:1912465/1‑100 (MQ=255) aGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTg > 1:373230/1‑100 (MQ=255) gAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCg < 2:67714/100‑1 (MQ=255) gAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCg > 1:1064421/1‑100 (MQ=255) aaGCGATGGATGCGAAAGAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTc < 1:106245/100‑1 (MQ=255) aaGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGt > 2:544974/1‑100 (MQ=255) aaGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTc < 2:1821147/100‑1 (MQ=255) gCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTca > 1:1897119/1‑100 (MQ=255) atctgatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTcaca < 1:840818/96‑1 (MQ=255) ggatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttt < 2:722784/100‑1 (MQ=255) gatgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTcacaagat > 2:840809/1‑96 (MQ=255) gatgCGAAAAAACGCTATGAGGACACTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCCTCACAtttt > 2:2294075/1‑100 (MQ=255) atgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACAttttt < 1:1397517/100‑1 (MQ=255) tgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTc < 1:159598/100‑1 (MQ=255) tgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTc < 1:544977/100‑1 (MQ=255) tgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTc > 2:843078/1‑100 (MQ=255) tgCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCa < 2:1962732/100‑1 (MQ=255) cGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCAt < 1:523595/100‑1 (MQ=255) gAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATa > 2:899824/1‑100 (MQ=255) aaaCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTc < 2:1775421/100‑1 (MQ=255) aaCGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCa < 2:1857091/100‑1 (MQ=255) gCTATGAGGACCCTGACAAAGAGTGACCGCATCAGAATGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGt > 1:1689047/1‑100 (MQ=255) tATGAGTACCCTGACATAGAGTGACCGCATCAGACTGCTCTGAAGGTATTCTGAGT‑CCACTACAAAGGATCTGCGTCACATTTTTCATAATTCATGtttt < 2:2001078/100‑1 (MQ=255) ggACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaa > 2:1241180/1‑100 (MQ=255) gACACTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTTTTATTGCCACTACAATGTATCTGCGTCTCATTTTTCATAGTTCATGTTTTTc < 2:396231/97‑1 (MQ=255) cccTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaata > 1:2016780/1‑100 (MQ=255) ccTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaataa < 1:2234473/100‑1 (MQ=255) ccTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCtaataa > 1:1371469/1‑100 (MQ=255) gACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTa > 2:1879353/1‑100 (MQ=255) aCAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAAtt > 2:2082737/1‑98 (MQ=255) aCAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAg < 2:1352740/100‑1 (MQ=255) cAAAGAGTGACCTCATCAGACTACCCGGAAGGGCTTCTGAGTGCCACTACAAGAGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGa > 2:1437083/1‑100 (MQ=255) aaGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAat < 2:2199505/100‑1 (MQ=255) agagTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAata < 2:1469127/100‑1 (MQ=255) gagTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATATGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAatat > 1:1178651/1‑100 (MQ=255) tGACCGCATCAGACTGCTCGGAAGGGATTTTGAGTGCCACTACTATGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATAtt < 2:1484763/98‑1 (MQ=255) aCCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaac < 1:875600/100‑1 (MQ=255) aCCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaac < 1:1520800/100‑1 (MQ=255) aCCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaac < 2:1623439/100‑1 (MQ=255) ccGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaaca > 2:1713332/1‑100 (MQ=255) ccGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACCACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaaca > 2:1276985/1‑100 (MQ=255) ccGCATCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaa > 2:436102/1‑100 (MQ=255) gCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaat > 1:449232/1‑100 (MQ=255) gCATCAGACTGCTCGGAAGGATTTCTAAGT‑CCACTACTAGGTATATGCGTCACATTTTTTATAATTCATGTTTTTCTAATAATTAGAATATTAaacaata < 2:811261/100‑1 (MQ=255) cATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaata > 2:1969093/1‑100 (MQ=255) aTCAGACTGCTCGTAATGGATTCTGTGTGACACTACAAGGTATCTTTGTCACATTTTTCATAATTCATGTTTTTCTAATATTTAGAATATTAaacaataa < 2:1124457/100‑1 (MQ=255) tCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataac < 1:905116/100‑1 (MQ=255) tCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataaca < 1:1870384/100‑1 (MQ=255) tCAGACTGCTCGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAaacaataaca < 1:753145/100‑1 (MQ=255) gACTTCTCGGAAGGGATTATGAGT‑CCACTACAAGTGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATc < 2:1014710/100‑1 (MQ=255) aCTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATc < 1:442804/100‑1 (MQ=255) cTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATcc < 2:1985977/100‑1 (MQ=255) tGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATc < 2:1453387/98‑1 (MQ=255) tGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATc < 1:671222/98‑1 (MQ=255) tGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCa < 1:1111703/100‑1 (MQ=255) gCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCAt > 1:37274/1‑100 (MQ=255) gCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATACAt > 2:823977/1‑100 (MQ=255) cTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCAtt > 2:453495/1‑100 (MQ=255) cGGAAGGGATTCTGAGTGCCACTATAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTAc < 2:1032377/100‑1 (MQ=255) cGGAAGGGATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACt > 2:1003035/1‑100 (MQ=255) ggAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACt > 2:559346/1‑100 (MQ=255) ggAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACt > 1:2192297/1‑100 (MQ=255) aGGGATTCTGAGTGCCACTACAAGTGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGa < 2:2207497/100‑1 (MQ=255) gggATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGaa > 2:1231576/1‑100 (MQ=255) ggATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAAt > 2:1649217/1‑100 (MQ=255) ggATTCTGAGT‑CCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATc < 1:1844475/100‑1 (MQ=255) gATTCTGAGTGCCAATACAAGGGAACTGAGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATACATTAATTGAAt > 2:455239/1‑99 (MQ=255) aTTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGaa < 1:1057856/97‑1 (MQ=255) aTTCTGAGTGCCACTACAAGGAATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCa > 2:1921103/1‑100 (MQ=255) cTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCAttt > 1:536397/1‑100 (MQ=255) cTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTAATGGAATCAtt > 2:1651264/1‑99 (MQ=255) tGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTg < 2:1485646/100‑1 (MQ=255) tGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTg < 1:1467626/100‑1 (MQ=255) gAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg < 2:1412947/100‑1 (MQ=255) gAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg < 2:725727/100‑1 (MQ=255) gAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg < 1:1596256/100‑1 (MQ=255) gAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTgg < 1:1565381/100‑1 (MQ=255) gTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGaa > 2:1212157/1‑100 (MQ=255) tGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAAt < 1:103504/100‑1 (MQ=255) gCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATc > 2:156947/1‑100 (MQ=255) gCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATc < 2:544609/100‑1 (MQ=255) gCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTAATGGAATCATTTGGa > 2:2348696/1‑97 (MQ=255) | TGAACATCCGACCGCTCAGGAAGCGATGGATGCGAAAAAACGCTATGAGGACCCTGACAAAGAGTGACCGCATCAGACTGCTCGGAAGGGATTCTGAGTGCCACTACAAGGGATCTGCGTCACATTTTTCATAATTCATGTTTTTCTAATAATTAGAATATTAAACAATAACAATCCATTACTGGAATCATTTGGAATC > NC_000913/407104‑407302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |