New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 228224	NA (NA)	20 (0.250)	9/166	NT	NA	noncoding (2466/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon
	?	NC_000913	= 228241	NA (NA)					noncoding (2483/2904 nt)	rrlH	23S ribosomal RNA of rrnH operon

CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228120‑228224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  <  NC_000913/228241‑228143                                                                                                                                                                                                              tcttccgatcTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATA                                                                                                          <  1:1142967/90‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTTAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATA                                                                                                          <  2:1278202/100‑1 CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATA                                                                                                          >  1:1082855/1‑100  GCGTGCAGGTGCGAAAGCAGGTCATAGGGATCCGGGGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  1:1236551/100‑1  GCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         >  2:379652/1‑100  GCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  1:1645232/100‑1  GCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  1:2287556/100‑1  GCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  2:1709845/100‑1  GCGAGAAGGTGCAAAAGCAGGTCATAGTAATCCGGTGGTTCTGAATGGAAGGGACATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  2:90278/100‑1   CGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  1:103144/99‑1    GAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCG                                                                                                       <  1:1156869/100‑1    GAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCG                                                                                                       >  1:1053474/1‑100    GAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCG                                                                                                       <  2:1418516/100‑1     agccgaTGCGAAAGCCGGTCATAGTGATCCGGTTGTTCTGAATGGAAGGGCTATCGCTCAACGGCTAAAAGGTACTCCGGGGATAACAGGCTGATA                                                                                                          <  2:598252/90‑1     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCTATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATAC                                                                                                         <  2:992130/97‑1     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      >  1:40725/1‑100     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      <  2:1762305/100‑1     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      >  1:1720224/1‑100     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      <  2:791148/100‑1     AGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGACCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      <  1:1002815/100‑1     AGCAGGTGCGAAAGCAGGTCAGAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGC                                                                                                      <  2:211183/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTTTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCn                                                                                                     <  1:2308336/100‑2      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  1:1890754/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  2:1336207/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  1:866380/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  2:843439/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     >  1:2044438/1‑100      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  2:40603/100‑1      GCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCCCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  2:1094613/100‑1        AGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC                                                                                                     <  1:1942263/98‑1         GGTGCGAAAGCAGGTCATAGTGATACGGTGGTTCTGAAAGGAAGGGCCATCGCTCAACGGATAAAAGGTAATGGGAGGATAACAGGCTGATACC                                                                                                        >  2:2298582/1‑94             ctAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGTTCGACGGATAAAAGGTATTCCGGTGTTAATAGGCTGATACCGCt                                                                                                     <  2:155746/91‑2             CGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATA                                                                                              >  1:398612/1‑100              GAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGac                                                                                                     >  2:2258361/1‑90                             TGATCGGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGT                                                                              <  1:1969514/100‑1                             TGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGT                                                                              <  2:1123026/100‑1                               ATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTAT                                                                            <  2:398609/100‑1                                TCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGTTGATACCGACGTCGATATGAACTCTTGGGCGGTATt                                                                           <  2:1940027/100‑2                                TCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATg                                                                           <  1:236796/100‑2                                TCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATC                                                                           <  2:2307165/100‑1                                TCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATC                                                                           <  2:2176537/100‑1                                TCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATC                                                                           <  2:1451599/100‑1                                TCCGGTGGTTCTGAATGCAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATC                                                                           <  2:942750/100‑1                                 CCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCA                                                                          <  2:997161/100‑1                                  CGGTGGTTCTGGATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCA                                                                          <  2:248248/99‑1                                  CGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAG                                                                         <  1:1572157/100‑1                                  CGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAG                                                                         <  2:1748916/100‑1                                   GGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGC                                                                        <  1:747259/100‑1                                   GGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGC                                                                        <  1:1771977/100‑1                                    GTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCC                                                                       <  2:1406773/100‑1                                    GTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCC                                                                       <  1:1585261/100‑1                                    GTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCC                                                                       <  1:516209/100‑1                                                                     ATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGC                                      <  1:1335595/100‑1                                                                                            tgtccaaccCCGCCGTCGATATGAAATCTTGGGCGGTATCAGCCTGTTATACCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCCGCACCA               >  2:1073693/10‑100                                                                                                   ctCCGCCGTTGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC        <  1:1958836/98‑1                                                                                                    ACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCA       <  2:1939701/100‑1                                                                                                    ACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCA       <  1:1390584/100‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCTATTCAGAACCACCGGATCA       <  2:241230/99‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  1:1971370/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  1:2042820/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  1:2211105/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      <  2:2376474/100‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  2:2348326/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  1:1187817/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  2:2297195/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  1:1011312/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      <  2:1880617/100‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCAC      >  2:1080502/1‑100                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCA       <  2:543704/99‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCA       <  2:855139/99‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATC        <  2:1680193/98‑1                                                                                                     CCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTAACTTTTATCCGTTGAGCGATGTGCCTTCCATTCAGAACCACCGGATCAC      >  2:586360/1‑100                                                                                                      CGCCGTCGATATGATCTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTACATTCAGAACCACCGGATCACT     <  2:1386716/100‑1                                                                                                      CGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCTTGGAGTACCTTTTATCCGTTGAGCTATGTCCCTGCCATTTAGAACCACCGGATCAC      >  2:473579/1‑99                                                                                                      CGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACT     >  2:601752/1‑100                                                                                                       GCCGTTGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGGGTACCTTTTATCCGTTGAGCGATGGCCCTTGCATTCAGAACCACCGGATC        <  2:2078919/96‑1                                                                                                       GCCGTCGATATGAATTATTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGCACCACCGGATCACTA    <  1:474565/100‑1                                                                                                       GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  1:505283/100‑1                                                                                                       GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  2:763463/100‑1                                                                                                       GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  2:798667/100‑1                                                                                                       GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  1:1450928/100‑1                                                                                                        CCGTCGATATGAACTCTTGGGCGGTATCTGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  2:1818320/99‑1                                                                                                        CCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTAT   <  2:1942731/100‑1                                                                                                        CCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTA    <  2:362259/99‑1                                                                                                         CGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  >  2:431616/1‑100                                                                                                         CGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  <  1:1562615/100‑1                                                                                                         CGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  <  2:1978903/100‑1                                                                                                         CGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  <  2:1203035/100‑1                                                                                                                                                                                                              CGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATAACAGGCTGATACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/228120‑228224 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATG  <  NC_000913/228241‑228143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.