New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 346864	NA (NA)	3 (0.040)	3/164	NT	NA	coding (1580/1587 nt)	prpR	propionate catabolism operon regulatory protein
	?	NC_000913	= 346894	NA (NA)					coding (1550/1587 nt)	prpR	propionate catabolism operon regulatory protein

CTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTtcagccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/346769‑346864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTTACG  <  NC_000913/346894‑346789                                                                                                                                                                                                            CTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAG                                                                                                        <  1:2270688/100‑1    TGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCG                                                                                                     >  1:2072912/1‑100     GTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCC                                                                                                      >  2:54964/1‑98                               TCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAG                                                                          <  1:753488/100‑1                                CGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGC                                                                         <  1:1403680/100‑1                                 GGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTTCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCT                                                                        <  1:1458029/100‑1                                                                                                   AGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACT      <  1:1784314/100‑1                                                                                                   AGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACT      >  1:245646/1‑100                                                                                                   AGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACT      >  1:987909/1‑100                                                                                                   AGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACT      <  2:1993274/100‑1                                                                                                   AGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACT      <  2:654890/100‑1                                                                                                    GCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTT     >  1:1224433/1‑100                                                                                                    GCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTT     >  2:1609528/1‑100                                                                                                    GCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTT     >  2:1759163/1‑100                                                                                                      CGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTTAC   <  2:1496071/100‑1                                                                                                       GGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGACCACCGATAAACTTACG  >  2:2183135/1‑100                                                                                                                                                                                                            CTATGTAAACATCTCCGATGCGTAAGTTTATCGGTGATCATCTATTGAAATTTATGCCGGATAAAGCGTTCGCGCTGCATTCGGCAGTTCAGCTTTtcagccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/346769‑346864 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGAACTGCCGAATGCAGCGCGAACGCTTTATCCGGCATAAATTTCAATAGATGATCACCGATAAACTTACG  <  NC_000913/346894‑346789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.