New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3620220 | NA (NA) | 8 (0.100) | 4/166 | NT | 100% | coding (1029/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | = 3620255 | 0 (0.000) | coding (1064/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTA > NC_000913/3620151‑3620319 | cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGGTGGTGGCGCACCGTCACACGGGC < 1:2307318‑M2/100‑1 (MQ=255) cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGC < 2:1199765‑M2/100‑1 (MQ=255) gAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC < 2:1623075‑M2/100‑1 (MQ=255) gAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCAGGATGGTGGCGCACCGTCACACGGGCC < 2:2127204‑M2/100‑1 (MQ=255) aaCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCG < 1:1880644‑M2/100‑1 (MQ=255) aCTGGCGGTGGTGTATGACCGTAGTGGCAAACATGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG < 2:1432995‑M2/100‑1 (MQ=255) aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG < 1:1513022‑M2/100‑1 (MQ=255) aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG > 1:601260‑M2/1‑100 (MQ=255) aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG > 2:364428‑M2/1‑100 (MQ=255) aCTGGCGGTGGTGTATGACCGAAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCG < 2:414778‑M2/99‑1 (MQ=255) tGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGAGGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCC > 1:992189‑M2/1‑100 (MQ=255) gCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCC > 1:138899‑M2/1‑98 (MQ=255) ttaataCCGGTGCCGGATGTTGGCGCACCGTCACACGGGCCGGCCccggtattgatcgtcgtaagtaaagctgcgcacctgtttgccactacggtcatac < 2:108323‑M2/98‑56 (MQ=255) aCCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccac < 1:1538927‑M2/100‑61 (MQ=255) ccGGGGCCGGATGGTGGCGCACCGTCACGCGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc < 1:1676372‑M2/100‑62 (MQ=255) ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc < 2:452782‑M2/100‑62 (MQ=255) ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgc < 1:1439473‑M2/100‑64 (MQ=255) ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcataaaccaccg < 2:1715566‑M2/99‑63 (MQ=255) gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtacagctgcggacctgtttgccactacggtcatacaccaccgc < 2:1565863‑M2/99‑64 (MQ=255) gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcc < 1:389140‑M2/100‑65 (MQ=255) | CGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTA > NC_000913/3620151‑3620319 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |