New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620220NA (NA)8 (0.100) 4/166 NT 100% coding (1029/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620255 0 (0.000)coding (1064/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTA  >  NC_000913/3620151‑3620319
                                                                     |                                                                                                   
cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGGTGGTGGCGCACCGTCACACGGGC                                                                       <  1:2307318‑M2/100‑1 (MQ=255)
cGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGC                                                                       <  2:1199765‑M2/100‑1 (MQ=255)
 gAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCC                                                                      <  2:1623075‑M2/100‑1 (MQ=255)
 gAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCAGGATGGTGGCGCACCGTCACACGGGCC                                                                      <  2:2127204‑M2/100‑1 (MQ=255)
  aaCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCG                                                                     <  1:1880644‑M2/100‑1 (MQ=255)
   aCTGGCGGTGGTGTATGACCGTAGTGGCAAACATGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG                                                                    <  2:1432995‑M2/100‑1 (MQ=255)
   aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG                                                                    <  1:1513022‑M2/100‑1 (MQ=255)
   aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG                                                                    >  1:601260‑M2/1‑100 (MQ=255)
   aCTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGG                                                                    >  2:364428‑M2/1‑100 (MQ=255)
   aCTGGCGGTGGTGTATGACCGAAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCG                                                                     <  2:414778‑M2/99‑1 (MQ=255)
     tGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGAGGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCC                                                                  >  1:992189‑M2/1‑100 (MQ=255)
       gCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCC                                                                  >  1:138899‑M2/1‑98 (MQ=255)
                                                            ttaataCCGGTGCCGGATGTTGGCGCACCGTCACACGGGCCGGCCccggtattgatcgtcgtaagtaaagctgcgcacctgtttgccactacggtcatac           <  2:108323‑M2/98‑56 (MQ=255)
                                                                 aCCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccac      <  1:1538927‑M2/100‑61 (MQ=255)
                                                                  ccGGGGCCGGATGGTGGCGCACCGTCACGCGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc     <  1:1676372‑M2/100‑62 (MQ=255)
                                                                  ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc     <  2:452782‑M2/100‑62 (MQ=255)
                                                                    ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgc   <  1:1439473‑M2/100‑64 (MQ=255)
                                                                    ggggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcataaaccaccg    <  2:1715566‑M2/99‑63 (MQ=255)
                                                                     gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtacagctgcggacctgtttgccactacggtcatacaccaccgc   <  2:1565863‑M2/99‑64 (MQ=255)
                                                                     gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcc  <  1:389140‑M2/100‑65 (MQ=255)
                                                                     |                                                                                                   
CGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTA  >  NC_000913/3620151‑3620319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.