New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3621314 | NA (NA) | 8 (0.100) | 5/168 | NT | 100% | coding (2123/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | = 3621344 | 0 (0.000) | coding (2153/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCA > NC_000913/3621244‑3621413 | cTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGT < 1:1639071‑M2/100‑1 (MQ=255) cTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGT > 2:28052‑M2/1‑100 (MQ=255) cTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGT < 2:403266‑M2/100‑1 (MQ=255) cTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCG < 1:1317398‑M2/98‑1 (MQ=255) ttATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTG > 1:60694‑M2/1‑100 (MQ=255) cACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgc < 1:740091‑M2/100‑62 (MQ=255) gcaccgcaccGTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgct < 1:823323‑M2/98‑63 (MQ=255) caccgcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcg < 1:281072‑M2/100‑66 (MQ=255) caccgcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcg < 2:320846‑M2/100‑66 (MQ=255) caccgcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcg < 2:950366‑M2/100‑66 (MQ=255) caccgcaccgTGAAGGGTGAAAACGCAGAGCGGTGcggtgcgtgaggcggtctgcttcggcatagtgcccgtgggtgacaagaccctcatcctcgctgcg < 2:562313‑M2/100‑66 (MQ=255) ccgcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcgctctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcgga < 2:933080‑M2/100‑68 (MQ=255) gcaccgTGAAGGGTGAAACCGCAGAGCGGTGcggtgcgtgaggcggtctgcttcgtcatagtgccagtgggtgaccagaccctcatcctcgctgcggata < 1:1037806‑M2/100‑70 (MQ=255) | CTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCA > NC_000913/3621244‑3621413 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |