BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4229413 =	NA (NA)	4 (0.050)	4/164	NT	NA	noncoding (38/70 nt)	REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 4614640	NA (NA)	4 (0.050)	4/164	NT	NA	noncoding (384/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 132 total aligned reads displayed.

CAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGT  >  NC_000913/4229314‑4229512

 aGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                                                     <  1:830864/100‑1 (MQ=255)

  gtgtGCTGGAACAGCCGNATGNAGATGAAGGACGGGACGAGTATTAATATTGTTAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                                                    <  2:1327704/100‑1 (MQ=255)

  gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                                                    <  2:1317696/100‑1 (MQ=255)

  gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                                                    >  2:1112672/1‑100 (MQ=255)

     tgCTGGAACCGCCGGATGAAGATGAAGGTGGGGACGAGTATTAATATTGTGCATCCTGTAGGCTTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                 <  2:1381744/100‑1 (MQ=37)

     tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                 <  1:992362/100‑1 (MQ=255)

      gCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                                                                >  1:725203/1‑100 (MQ=255)

      gCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                                                                <  1:188628/100‑1 (MQ=255)

      gCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                                                                >  2:228996/1‑100 (MQ=255)

      gCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                                                                <  1:961141/100‑1 (MQ=255)

           aaCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAg                                                                                           <  2:1597361/100‑1 (MQ=255)

           aaCAGCCGGATAAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACa                                                                                             <  1:978517/98‑1 (MQ=255)

            aCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGa                                                                                          >  1:460097/1‑100 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGAt                                                                                         >  1:1381871/1‑98 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                       >  1:2301798/1‑100 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                       >  2:736733/1‑100 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                       >  2:2363766/1‑100 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                       >  1:837009/1‑100 (MQ=255)

               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                       >  1:2061042/1‑100 (MQ=255)

                  ggATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCgg                                                                                    <  1:1035969/100‑1 (MQ=255)

                      gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑Ca                                                                               <  2:84793/100‑1 (MQ=255)

                      gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑Ca                                                                               >  2:82327/1‑100 (MQ=255)

                      gaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑Ca                                                                               <  2:931919/100‑1 (MQ=255)

                       aagattaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                              <  1:151080/100‑1 (MQ=255)

                       aagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                              <  1:1638546/100‑1 (MQ=255)

                        agatgaagGCCGGGACGAGTATTAATATTGTGCATCCTGTAGGCGTGATACGCCGCGCTAAGAGTCGCGTCCGGCACGATCAACAAGATGcgg                                                                                     >  2:2354488/1‑91 (MQ=255)

                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                             <  2:1042034/100‑1 (MQ=255)

                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                             >  1:1452539/1‑100 (MQ=255)

                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                             <  2:1042002/100‑1 (MQ=255)

                              agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCg                                                                       >  1:1297133/1‑100 (MQ=255)

                               ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCgg                                                                      >  2:2284528/1‑100 (MQ=255)

                               ggacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCgg                                                                      >  1:1834462/1‑100 (MQ=255)

                                gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAATACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCTGAT‑CATGCATCCGGc                                                                     <  2:1671704/100‑1 (MQ=255)

                                   gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAAt                                                                  <  1:1323317/100‑1 (MQ=255)

                                    ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAAtt                                                                 >  1:1602364/1‑100 (MQ=255)

                                       cgAGTATTAATATTGTGAATACTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCAc                                                              >  2:336789/1‑100 (MQ=255)

                                        gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCATGCGTCGCATCAGGCACTATGAACAAGATGCCGTTT‑CATGCATCCGGAAATTCACt                                                             <  2:227555/100‑1 (MQ=37)

                                          gTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAATCTTCGCATCAGGCACTATGAACAAGATGCCCTAT‑CATGCATCCGCCAAGGCACTTa                                                           >  1:1304456/1‑100 (MQ=25)

                                           tATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATAAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                 <  1:1075993/93‑4 (MQ=21)

                                            aTTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGATCAAGATGCCGGAT‑CATGCATCCAGCAATTCACTTaaa                                                         <  2:1284356/100‑1 (MQ=255)

                                              tAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaaaaa                                                       >  2:2000878/1‑100 (MQ=255)

                                              tAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaaaaa                                                       >  1:2208894/1‑100 (MQ=255)

                                               aaTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAAc                                                      >  2:784750/1‑100 (MQ=255)

                                                atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACg                                                     >  2:186566/1‑100 (MQ=255)

                                                 tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACgg                                                    >  1:1089307/1‑100 (MQ=255)

                                                 tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACgg                                                    <  1:1179198/100‑1 (MQ=255)

                                                  atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGt                                                   >  2:1590958/1‑100 (MQ=255)

                                                    tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGa                                                 >  2:1784295/1‑100 (MQ=255)

                                                    tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGa                                                 <  2:891158/100‑1 (MQ=255)

                                                     gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGAc                                                >  1:1592891/1‑100 (MQ=255)

                                                     gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGAc                                                >  2:1138131/1‑100 (MQ=255)

                                                      ttaaTCCTTTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGAcc                                               <  1:2209798/98‑1 (MQ=255)

                                                       gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                              <  1:1928402/100‑1 (MQ=255)

                                                         aTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGc                                            >  2:1507788/1‑100 (MQ=255)

                                                             tGTAGGCCTTATCAGACGCGTCAAGCGTCGCATCAGGCACTATCAATAAGATTCCGGAT‑CATGCATCCGGCAATACACTTAAAAACTCTGACCAGCTTcc                                        <  1:2395212/100‑1 (MQ=25)

                                                             tGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTcc                                        >  2:817897/1‑100 (MQ=255)

                                                               tAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                         >  2:2028710/1‑97 (MQ=255)

                                                                aGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                     >  1:2309403/1‑100 (MQ=255)

                                                                aGGCCAGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                     <  1:439672/100‑1 (MQ=255)

                                                                 tgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                    <  1:812167‑M1/66‑1 (MQ=255)

                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                     <  1:288962/99‑1 (MQ=255)

                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                    <  2:303291/100‑1 (MQ=255)

                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                    >  1:357140/1‑100 (MQ=255)

                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                    <  1:2203029/100‑1 (MQ=255)

                                                                  gcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAg                                      <  1:713648‑M1/64‑1 (MQ=255)

                                                                  gCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCgg                                   <  2:66837/100‑1 (MQ=255)

                                                                   cctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGa                                  <  1:1805478‑M1/68‑1 (MQ=255)

                                                                    cTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGaa                                 >  1:2156956/1‑100 (MQ=255)

                                                                     tGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                                <  1:785668/100‑1 (MQ=255)

                                                                       aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCg                              >  1:43262/1‑100 (MQ=255)

                                                                       aTAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCg                              >  1:931073/1‑100 (MQ=255)

                                                                        tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                             >  2:372577/1‑100 (MQ=255)

                                                                        tAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                             >  1:784147/1‑100 (MQ=255)

                                                                         aaGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGct                            <  1:228999/100‑1 (MQ=255)

                                                                           gACGCGTCAAGCGTCGCATCCGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                          >  2:1458188/1‑100 (MQ=255)

                                                                              gcgTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCttcttc                       <  2:305227/100‑1 (MQ=255)

                                                                               cgTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCa                      <  1:1942711/100‑1 (MQ=255)

                                                                                ttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                     <  1:1987527‑M1/81‑1 (MQ=255)

                                                                                gTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                     >  1:808544/1‑100 (MQ=255)

                                                                                gTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                     <  1:111158/100‑1 (MQ=255)

                                                                                 tCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAcc                    >  2:617714/1‑100 (MQ=255)

                                                                                 tCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCACTTCTTCAcc                    <  2:2343366/100‑1 (MQ=255)

                                                                                  cAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCa                   >  2:1017122/1‑100 (MQ=255)

                                                                                     gCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc                <  1:82329/100‑1 (MQ=255)

                                                                                        tCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTa             <  1:1526956/100‑1 (MQ=255)

                                                                                         cGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaa            >  2:2255222/1‑100 (MQ=255)

                                                                                         cGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaa            >  1:481000/1‑100 (MQ=255)

                                                                                          gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCATTTAAAAACAGTGACTCGCTTACAGCGGAACCTCCTCTCAACCAGCCt               >  2:1478882/1‑96 (MQ=255)

                                                                                          gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa           <  1:496167/100‑1 (MQ=255)

                                                                                          gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa           >  1:1803074/1‑100 (MQ=255)

                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac          >  2:1073467/1‑100 (MQ=255)

                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac          <  1:1371523/100‑1 (MQ=255)

                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac          >  1:1781212/1‑100 (MQ=255)

                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac          <  1:494739/100‑1 (MQ=255)

                                                                                              caggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAAcaca       >  2:45848‑M1/6‑100 (MQ=255)

                                                                                               aggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACAt      >  2:407075‑M1/5‑100 (MQ=255)

                                                                                                ggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATa     >  2:2017941‑M1/4‑100 (MQ=255)

                                                                                                  cACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAg   >  2:1874942‑M1/2‑100 (MQ=255)

                                                                                                   aCTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgt  >  2:1198586/1‑100 (MQ=255)

                                                                                                   aCTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAgt  >  2:1267915/1‑100 (MQ=255)

CAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAGT  >  NC_000913/4229314‑4229512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.