BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 409055	NA (NA)	9 (0.110)	5/164	NT	NA	noncoding (4/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	= 409088	NA (NA)	9 (0.110)	5/164	NT	NA	noncoding (37/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 114 total aligned reads displayed.

CGTCCATGGAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTA  >  NC_000913/408956‑409154

    cATGGAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccg                                                                                                 >  2:163076‑M1/1‑96 (MQ=255)

    cATGGAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccg                                                                                                 <  1:1785964‑M1/100‑5 (MQ=255)

     aTGGAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccgg                                                                                                <  2:2100619‑M1/100‑6 (MQ=255)

       ggAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTGTATGCCTGGTGTGGCTTCGTACgccggat                                                                                              <  2:1646641‑M1/100‑8 (MQ=255)

       ggAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggat                                                                                              >  2:1954605‑M1/1‑93 (MQ=255)

          gctaGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATa                                                                                             <  1:821721/95‑1 (MQ=255)

            aaGTTACAGCGTAAAACGCATTATATGGCTGCGCTAAAAATTATTGCTCGCCGTAGGGAATAATTATATGCCTGGTGTGGCTTCGTACGGCGGATAAGa                                                                                          <  2:56761/99‑1 (MQ=255)

              gTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGAcgc                                                                                       <  2:1703479/100‑1 (MQ=255)

              gTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGAcgc                                                                                       >  2:2084558/1‑100 (MQ=255)

              gTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGAcgc                                                                                       >  1:122085/1‑100 (MQ=255)

                tACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCgg                                                                                     >  2:1904108/1‑100 (MQ=255)

                tACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCgg                                                                                     >  2:2182522/1‑100 (MQ=255)

                 aCAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCgg                                                                                     >  2:2367028/1‑99 (MQ=255)

                 aCAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGc                                                                                    >  2:2388370/1‑100 (MQ=255)

                   aGCGTAACACGCATAATATTAATGCGCTAAAAATTATTACTCGCCGTAGCGAAAAATTATATGCCTGGTGTGGCTTCGTACGCAGGATACGACGCGGCAg                                                                                  >  2:2197445/1‑100 (MQ=255)

                   aGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAg                                                                                  <  2:532621/100‑1 (MQ=255)

                   aGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAg                                                                                  <  1:1826409/100‑1 (MQ=255)

                    gCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAgg                                                                                 >  2:1128687/1‑100 (MQ=255)

                      gTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCg                                                                               >  1:1983459/1‑100 (MQ=255)

                      gTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCg                                                                               >  1:2303933/1‑100 (MQ=255)

                        aaaaCGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTc                                                                             <  1:768376/100‑1 (MQ=255)

                        aaaaCGCATAATATTGCTGAGCTAAAAATTATTGCACGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTc                                                                             >  2:600676/1‑100 (MQ=255)

                         aaaCGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCg                                                                            <  1:2359670/100‑1 (MQ=255)

                            cGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCA                                                                          >  1:1224440‑M2/1‑99 (MQ=255)

                              cATAATATTGTTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatcc                                                                       <  1:657490‑M1/100‑31 (MQ=255)

                              cATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggataagacgcctgccgcgtcttatcc                                                                       <  1:2068652‑M1/100‑31 (MQ=255)

                              cATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCC                                                                       >  1:1256704‑M2/1‑100 (MQ=255)

                               ttaatatTGCTGTGCTAAAAATTATTGCTTGCCGTGGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatcc                                                                       <  2:794303‑M1/98‑31 (MQ=255)

                               ataataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTATgccggatgcgacgcctgccgcgtcttatccg                                                                      <  1:28968‑M1/100‑32 (MQ=255)

                               ataataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCG                                                                      >  1:644864‑M2/1‑100 (MQ=255)

                                taataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatccgg                                                                     <  1:109676‑M1/100‑33 (MQ=255)

                                taataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatccgg                                                                     <  2:1995284‑M1/100‑33 (MQ=255)

                                taataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatccgg                                                                     <  1:587807‑M1/100‑33 (MQ=255)

                                taataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGG                                                                     >  2:1241753‑M2/1‑100 (MQ=255)

                                 aataTTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGC                                                                    >  1:1239534‑M2/1‑100 (MQ=255)

                                  atatTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACgccggatgcgacgcctgccgcgtcttatccggcg                                                                   <  1:1190694‑M1/100‑35 (MQ=255)

                                      tgctgcGCTAAAAATTATTGCTCCCCGTAGCGAATAATTATATGTCTGGTGTGGCTTCGTACGCCGGATAAGACGTGGCAGGCGTCGCATCCGGCATTa                                                                <  2:1045317/99‑1 (MQ=38)

                                        ctgcGCTAAAAATTATTGCTCACCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                             >  1:1272554/1‑100 (MQ=255)

                                         tgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAg                                                             <  2:368790/99‑1 (MQ=255)

                                          gcgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGa                                                           <  1:1255512/100‑1 (MQ=255)

                                           cgatAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaa                                                          <  2:1761928/97‑1 (MQ=255)

                                             cTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaaaa                                                        >  2:1373016/1‑100 (MQ=255)

                                               aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTTGCTTCGTACGCCGGATAAGACTCGGCAGGCGTCTCATCCGGCATTAAAGGAAAATc                                                      <  2:922283/100‑1 (MQ=255)

                                               aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                      >  1:1690794/1‑100 (MQ=255)

                                               aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                      <  1:639230/100‑1 (MQ=255)

                                               aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                      >  1:1693219/1‑100 (MQ=255)

                                                aaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCa                                                     >  1:1523026/1‑100 (MQ=255)

                                                 aaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                    <  2:863692/100‑1 (MQ=255)

                                                   attattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCa                                                  <  1:903211/100‑1 (MQ=255)

                                                     tattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAAt                                                <  1:2145141/100‑1 (MQ=255)

                                                       ttGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAAttn                                              <  1:594866/100‑2 (MQ=255)

                                                         gCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAc                                            >  1:2023595/1‑100 (MQ=255)

                                                         gCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAc                                            <  1:1343949/100‑1 (MQ=255)

                                                           tCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGt                                          >  2:2244779/1‑100 (MQ=255)

                                                            cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                         >  2:1252384/1‑100 (MQ=255)

                                                            cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                         >  2:1345024/1‑100 (MQ=255)

                                                            cGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                         >  2:2069271/1‑100 (MQ=255)

                                                             gCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGtt                                         <  2:2227342/99‑1 (MQ=255)

                                                                 tAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCt                                    >  2:2233824/1‑100 (MQ=255)

                                                                    cGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCg                                 >  2:282416/1‑100 (MQ=255)

                                                                     gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                >  1:1550428/1‑100 (MQ=255)

                                                                     gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                >  2:271941/1‑100 (MQ=255)

                                                                      aataatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGcc                               <  2:85331/100‑1 (MQ=255)

                                                                       ataaaTATATGACTGGTGTGGCTTCGTACGATGAATAAGACGCGGCAAGAGTCGGATCCGGTATTAAAGGAATATCAGCAATTAACGTTGTGCTTCg                                 <  2:412606/97‑1 (MQ=255)

                                                                        taatTATATTCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCATTCGTCGCATCCTGCATTAAATGAAAATCAGCTATTAACGTGGTGCTTCGCCAc                             <  2:623454/100‑1 (MQ=255)

                                                                         aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                            <  1:2310946/100‑1 (MQ=255)

                                                                         aatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAcc                            <  1:1878546/100‑1 (MQ=255)

                                                                          atTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCt                           <  1:260796/100‑1 (MQ=255)

                                                                           ttATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTa                          <  2:1100957/100‑1 (MQ=255)

                                                                            tataTGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTaa                         >  1:1045066/1‑100 (MQ=255)

                                                                               atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                      <  1:1580468/100‑1 (MQ=255)

                                                                               atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                      <  1:987863/100‑1 (MQ=255)

                                                                                tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                      <  2:1422300/99‑1 (MQ=255)

                                                                                tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCt                     <  1:2240344/100‑1 (MQ=255)

                                                                                tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCt                     <  1:1119054/100‑1 (MQ=255)

                                                                                 gCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCtt                    >  2:1847460/1‑100 (MQ=255)

                                                                                  ccTGGTGGGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                   <  2:71008/100‑1 (MQ=255)

                                                                                    tGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCaa                 <  1:657030/100‑1 (MQ=255)

                                                                                    tGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCaa                 <  2:1883069/100‑1 (MQ=255)

                                                                                     ggTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAAt                >  2:128537/1‑100 (MQ=255)

                                                                                      gtgtGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATc               <  2:801188/100‑1 (MQ=255)

                                                                                        gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg             >  1:1041119/1‑100 (MQ=255)

                                                                                        gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg             >  1:1187439/1‑100 (MQ=255)

                                                                                          ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt           >  2:1196848/1‑100 (MQ=255)

                                                                                          ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt           >  2:314286/1‑100 (MQ=255)

                                                                                           gCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtt          >  2:1619735/1‑100 (MQ=255)

                                                                                              tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg       <  2:1550410/100‑1 (MQ=255)

                                                                                              tCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTg       <  2:2027226/100‑1 (MQ=255)

                                                                                                gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa     <  2:115497/100‑1 (MQ=255)

                                                                                                gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa     <  1:1201698/100‑1 (MQ=255)

                                                                                                 tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt    <  2:950996/100‑1 (MQ=255)

                                                                                                 tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt    >  1:1699191/1‑100 (MQ=255)

                                                                                                 tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt    <  1:2272812/100‑1 (MQ=255)

                                                                                                 tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt    <  1:602873/100‑1 (MQ=255)

                                                                                                 tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt    <  2:159025/100‑1 (MQ=255)

                                                                                                  aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt   >  1:12312/1‑100 (MQ=255)

                                                                                                   cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCgtacgaagccacaccaggcatataattattcgctacggcgagcaataatttttagcgcagcaatat  <  1:1190694‑M2/100‑67 (MQ=255)

                                                                                                   cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa  >  2:1015242/1‑100 (MQ=255)

                                                                                                   cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa  >  2:1797366/1‑100 (MQ=255)

                                                                                                   cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGCGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa  <  2:1280704/100‑1 (MQ=255)

CGTCCATGGAGCAAGTTACAGCGTAAAACGCATAATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTA  >  NC_000913/408956‑409154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.