New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2511352 =NA (NA)11 (0.140) 7/164 NT NA noncoding (1/88 nt) REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2511384 = NA (NA)noncoding (33/88 nt) REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences

CGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAG  >  NC_000913/2511253‑2511450
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gcgctgggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagg                                                                                                    >  2:2231851‑M1/100‑100 (MQ=255)
cGTGGGTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATg                                                                                                    <  2:592417/100‑1 (MQ=255)
cGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATg                                                                                                    >  2:1465074/1‑100 (MQ=255)
 cgctgggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagg                                                                                                    <  1:2098352‑M1/1‑1 (MQ=255)
  tGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGcc                                                                                                  >  2:1246335/1‑100 (MQ=255)
  gctgggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGcc                                                                                                  >  1:2120664‑M1/98‑100 (MQ=255)
  gctgggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGcc                                                                                                  <  1:421359‑M1/3‑1 (MQ=255)
   ggCTATCGTGAAGGCTGGTGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCt                                                                                                 >  1:1562420/1‑100 (MQ=255)
    tgggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTg                                                                                                >  1:1097516‑M1/96‑100 (MQ=255)
     cTATCGTGAAGGCTGGCGCGATCGTGACGAGCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTg                                                                                                <  1:1489119/99‑1 (MQ=255)
      ggattgtagttgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGAt                                                                                              <  1:266207‑M1/7‑1 (MQ=255)
       aTCGTGAAGGCTGGGGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATg                                                                                             <  2:2093178/100‑1 (MQ=255)
        tCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGc                                                                                            <  1:964498/100‑1 (MQ=255)
        tCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGc                                                                                            >  2:1215112/1‑100 (MQ=255)
        tCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGc                                                                                            <  2:1041097/100‑1 (MQ=255)
          gTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGa                                                                                          >  2:2171816/1‑100 (MQ=255)
           tGAAGGCTGGCGCGATCTTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGAc                                                                                         <  1:621671/100‑1 (MQ=255)
           tGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGAc                                                                                         <  1:53901/100‑1 (MQ=255)
            gAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACg                                                                                        <  1:968092/100‑1 (MQ=255)
                tgaatgagcgtcgcatctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAg                                                                                    <  1:1501924‑M1/17‑1 (MQ=255)
                  tGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTg                                                                                  <  1:2259809/100‑1 (MQ=255)
                   ggCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGc                                                                                 <  1:1583549/100‑1 (MQ=255)
                       cgATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCt                                                                             <  1:1487654/100‑1 (MQ=255)
                       cgATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCt                                                                             <  2:186416/100‑1 (MQ=255)
                       cgATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCt                                                                             <  1:1022486/100‑1 (MQ=255)
                        gATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCtt                                                                            <  1:2294295/100‑1 (MQ=255)
                            gTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCa                                                                        <  1:1817289/100‑1 (MQ=255)
                            gTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCa                                                                        <  1:1817862/100‑1 (MQ=255)
                             tGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAg                                                                       <  1:503302/100‑1 (MQ=255)
                             tGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAg                                                                       >  1:1046337/1‑100 (MQ=255)
                             tGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAg                                                                       <  1:964719/100‑1 (MQ=255)
                              gACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAgg                                                                      <  1:877317/100‑1 (MQ=255)
                              gACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAgg                                                                      <  2:2276957/100‑1 (MQ=255)
                              gACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAgg                                                                      <  2:1907847/100‑1 (MQ=255)
                               tctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGc                                                                     >  1:621291‑M1/69‑100 (MQ=255)
                                ctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGgct                                                                    >  2:1501907‑M1/68‑99 (MQ=255)
                                ctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    >  2:1753959‑M1/68‑100 (MQ=255)
                                ctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    >  1:1250422‑M1/68‑100 (MQ=255)
                                cGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    >  1:2043732/1‑100 (MQ=255)
                                cGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    <  1:934113/100‑1 (MQ=255)
                                cGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    <  1:1106562/100‑1 (MQ=255)
                                cGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                    <  1:1904635/100‑1 (MQ=255)
                                 tggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCt                                                                   >  2:1805413‑M1/67‑100 (MQ=255)
                                 tggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCt                                                                   >  1:2151935‑M1/67‑100 (MQ=255)
                                 tggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCt                                                                   >  2:633253‑M1/67‑100 (MQ=255)
                                  ggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtatGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTa                                                                  >  1:30640‑M1/66‑100 (MQ=255)
                                  atcatcGCGGAAAAGTCCGGGGTCATGAGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTa                                                                  >  2:1982316/1‑100 (MQ=255)
                                   tcatcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTAc                                                                 <  1:1139381/100‑1 (MQ=255)
                                    catcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACa                                                                >  1:1658388/1‑100 (MQ=255)
                                    catcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCGGATGCGACGCTAGTGCGTCTTATCAGGCCTACa                                                                >  1:451331/1‑100 (MQ=255)
                                      tcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACaaa                                                              <  1:433534/100‑1 (MQ=255)
                                       tattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAAc                                                             >  1:868907‑M1/61‑100 (MQ=255)
                                       cgcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACaa                                                               <  2:2337156/98‑1 (MQ=255)
                                        gcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAAcc                                                            >  1:862952/1‑100 (MQ=255)
                                        gcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAAcc                                                            >  1:1381625/1‑100 (MQ=255)
                                          ggAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCgg                                                          >  1:788609/1‑100 (MQ=255)
                                          ggAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCgg                                                          >  1:1273184/1‑100 (MQ=255)
                                           gAAAAGGCCGGGGTCATGGGCACCGCCATTAAGCGCGTCCGGCAATGGAGCACAATGCCTGATGCGACTCTAGTGCTTTTTATCAGGCCTACAAACCGGc                                                         <  2:960043/100‑1 (MQ=38)
                                           gAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGc                                                         <  1:1832910/100‑1 (MQ=255)
                                               aGGCCGGGGTCATGGGAACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATTAGGCCTACAAACCGGCTCtt                                                     <  1:2261003/100‑1 (MQ=255)
                                                ggCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCACTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCttt                                                    >  2:696845/1‑100 (MQ=255)
                                                ggCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCttt                                                    <  2:121256/100‑1 (MQ=255)
                                                  ccGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTaa                                                  >  1:1318353/1‑100 (MQ=255)
                                                   cGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAc                                                 >  1:2398667/1‑100 (MQ=255)
                                                    ggggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcg                                                <  1:606595/100‑1 (MQ=255)
                                                    ggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcg                                                >  2:214672‑M1/48‑100 (MQ=255)
                                                      ggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcgcg                                              >  1:1679131/1‑100 (MQ=255)
                                                       gTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGt                                             >  2:509032/1‑100 (MQ=255)
                                                         cATGGGCTCCTCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAg                                           <  1:808515/100‑1 (MQ=255)
                                                           tGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAggg                                         >  2:2336481/1‑100 (MQ=255)
                                                             ggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCg                                       <  1:806723/100‑1 (MQ=255)
                                                             ggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCg                                       <  1:2171841/100‑1 (MQ=255)
                                                              gCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCACGCCTACAAACCGGCTCTTTAACGCGTAGGGCgg                                      <  2:1578308/100‑1 (MQ=255)
                                                                 ccGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATa                                   >  1:394316/1‑100 (MQ=255)
                                                                      aTTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCg                              >  1:1130138/1‑100 (MQ=255)
                                                                      aTTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCg                              >  1:1130159/1‑100 (MQ=255)
                                                                      aTTAAACGCGTCCGCCAATGGAACACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGAGCGGATAAGGCg                              >  2:797046/1‑100 (MQ=255)
                                                                         aaaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                           <  1:1434118/100‑1 (MQ=255)
                                                                         aaaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                           <  2:1881955/100‑1 (MQ=255)
                                                                          aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTa                          >  2:1031722/1‑100 (MQ=255)
                                                                          aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTa                          <  1:1431533/100‑1 (MQ=255)
                                                                           aCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAc                         <  2:218984/100‑1 (MQ=255)
                                                                            cgcgTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAACGCGTTTAcg                        >  2:1233760/1‑100 (MQ=255)
                                                                               gTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgccg                     >  2:1589921/1‑100 (MQ=255)
                                                                                tCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgccgc                    <  2:1149954/100‑1 (MQ=255)
                                                                                 ccGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCa                   <  1:1460615/100‑1 (MQ=255)
                                                                                   gCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATc                 <  1:309545/100‑1 (MQ=255)
                                                                                    ccAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATcc                >  1:2007196/1‑100 (MQ=255)
                                                                                     cAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCg               <  1:1089523/100‑1 (MQ=255)
                                                                                     cAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCg               <  1:1798589/100‑1 (MQ=255)
                                                                                           aGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATa         >  1:145358/1‑100 (MQ=255)
                                                                                           aGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGACGCATCCACCAATa         >  1:760507/1‑100 (MQ=255)
                                                                                            gCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAg        >  2:442747/1‑100 (MQ=255)
                                                                                             cacaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATGCGGCGTAAACGCCTTATCCGccctacgc       <  1:232054/100‑7 (MQ=25)
                                                                                              acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTg      <  2:1271937/100‑1 (MQ=255)
                                                                                              acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACAGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATACGCCAATa         >  2:1745011/1‑97 (MQ=255)
                                                                                               caATGCCTGCTGCTACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTATTTAACGCGTAGGGCGGATAAGGCGTTTACGCCCCATCCGCCAATCGttc     >  2:1137822/1‑98 (MQ=25)
                                                                                                aaTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGcc    >  1:60697/1‑100 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAg  >  1:1927923/1‑100 (MQ=255)
                                                                                                   GCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAGGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGcc    >  2:2083465‑M1/1‑97 (MQ=255)
                                                                                                   |                                                                                                  
CGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAG  >  NC_000913/2511253‑2511450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.