New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2593024NA (NA)5 (0.060) 5/164 NT NA noncoding (47/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2593056 NA (NA)noncoding (79/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 109 total aligned reads displayed.

ACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGC  >  NC_000913/2592925‑2593122
                                                                                                   |                                                                                                  
acgtcgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGAt                                                                                                    <  1:464540/100‑1 (MQ=255)
   acgatTTGCTGAAAAAGTATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgc                                                                                                  <  1:1222602‑M1/99‑3 (MQ=255)
   acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcc                                                                                                 >  2:1534068‑M1/1‑97 (MQ=255)
    cgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcct                                                                                                <  2:1403970‑M1/100‑5 (MQ=255)
     gacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctg                                                                                               <  2:1907370‑M1/100‑6 (MQ=255)
         ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCCTCCGGCAATGGTGAACGATGCCTGATGc                                                                                           >  1:1395163/1‑100 (MQ=255)
         ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataa                                                                                           >  2:1959622‑M1/1‑91 (MQ=255)
         ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                                                                                           >  2:962350/1‑100 (MQ=255)
          gCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCg                                                                                          <  1:2388160/100‑1 (MQ=255)
          gCCGAAAAAGGATCAACCGAAGAAGTAAGCAGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgacgc                                                                                           >  2:848177‑M1/1‑90 (MQ=255)
           ccGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                                                                                         <  2:2121748/100‑1 (MQ=255)
            cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                                                                                        <  1:2002673/100‑1 (MQ=255)
            cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                                                                                        >  1:951329/1‑100 (MQ=255)
             gAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGCTAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATACCTGATGCgcc                                                                                        >  2:194243/1‑97 (MQ=255)
             gAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                                                                                            <  2:875809/95‑1 (MQ=255)
                 agggATCAACCGAAGAAGTAGGCTGAGTGCTCAACCGTAGGGCGGATAAGGCGTTAGCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                                                                                   <  2:1280951/98‑1 (MQ=25)
                   ggATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                                                                                 >  1:170340/1‑100 (MQ=255)
                     aTCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg                                                                               >  1:1331743/1‑100 (MQ=255)
                     aTCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg                                                                               >  1:1185855/1‑100 (MQ=255)
                     aTCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGATGAACGATGCCTGATGCGACGCTCAcgcg                                                                               >  1:809425/1‑100 (MQ=255)
                       cAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                             <  1:501829/100‑1 (MQ=255)
                       cAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                             <  2:1333255/100‑1 (MQ=255)
                       cAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                             <  1:1410732/100‑1 (MQ=255)
                        aaCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAATGCCGCATTCGGCAATGGTGAACGATTCCTGATGCGACGCTCACGCGtt                                                                             <  2:823547/99‑2 (MQ=255)
                        aaCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt                                                                            >  1:100983/1‑100 (MQ=255)
                         aCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCtt                                                                           >  2:249633/1‑100 (MQ=255)
                          ccGAAGAAGTAAGCTGAGTGCTCAACCGTCGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGAAACCTAATGCGACGCTCACGCGTCTTA                                                                          <  1:104761‑M2/100‑1 (MQ=255)
                          ccGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTA                                                                          >  2:482578‑M2/1‑100 (MQ=255)
                          ccGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTA                                                                          <  2:746335‑M2/100‑1 (MQ=255)
                          ccGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTA                                                                          <  2:1692901‑M2/100‑1 (MQ=255)
                           cGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAT                                                                         >  1:717780‑M2/1‑100 (MQ=255)
                           cGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAT                                                                         >  1:717757‑M2/1‑100 (MQ=255)
                           cGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAT                                                                         <  1:732418‑M2/100‑1 (MQ=255)
                            gaagaaGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATC                                                                        >  1:120491‑M2/1‑100 (MQ=255)
                              agaagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAG                                                                      >  1:1797290‑M2/1‑100 (MQ=255)
                               gaagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcagg                                                                     <  2:506072‑M1/100‑32 (MQ=255)
                               gaagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGG                                                                     >  1:1401231‑M2/1‑100 (MQ=255)
                                 agTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                   >  1:726568/1‑100 (MQ=255)
                                  gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcat                                                                  <  1:1959644‑M1/100‑35 (MQ=255)
                                   tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcatc                                                                 <  2:1630001‑M1/100‑36 (MQ=255)
                                   tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAg                                                                 <  1:1559141/100‑1 (MQ=255)
                                     aGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGt                                                               <  1:247603/100‑1 (MQ=255)
                                       cTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTaa                                                             >  2:1164045/1‑100 (MQ=255)
                                        tGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcatcgttca                                                            <  1:138839‑M1/100‑41 (MQ=255)
                                        tGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAAt                                                            >  1:1007339/1‑100 (MQ=255)
                                         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATTCGTCGCTCACGCGTCTTATCAGGCCAGGTAATc                                                           <  2:1572178/100‑1 (MQ=255)
                                         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                           >  2:1766754/1‑100 (MQ=255)
                                         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                           >  2:650459/1‑100 (MQ=255)
                                         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                           <  1:934020/100‑1 (MQ=255)
                                             gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                       >  1:953077/1‑100 (MQ=255)
                                             gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                       >  1:1507920/1‑100 (MQ=255)
                                              cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                      >  2:702025/1‑100 (MQ=255)
                                               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtt                                                     >  2:1556921/1‑100 (MQ=255)
                                               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtt                                                     <  1:962361/100‑1 (MQ=255)
                                                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGtgtgc                                                    >  1:2186189/1‑96 (MQ=255)
                                                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                    >  1:2187542/1‑100 (MQ=255)
                                                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                    <  2:2065712/100‑1 (MQ=255)
                                                 aaCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtttt                                                   <  2:1222857/100‑1 (MQ=255)
                                                 aaCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtttt                                                   <  1:1541201/100‑1 (MQ=255)
                                                  aCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGTGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTa                                                  >  1:1896660/1‑100 (MQ=255)
                                                  aCCGTAGGCCGGATAAGGCGTTAACGCCGCAGCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTa                                                  <  1:1180213/100‑1 (MQ=255)
                                                    cGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAca                                                <  2:1588248/100‑1 (MQ=255)
                                                     gTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcat                                               <  2:1417426/100‑1 (MQ=255)
                                                      tAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                              >  2:754543/1‑100 (MQ=255)
                                                      tAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                              <  1:894273/100‑1 (MQ=255)
                                                      attgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                              >  1:2228410/4‑100 (MQ=25)
                                                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                           >  1:433560/1‑100 (MQ=37)
                                                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                           >  1:296389/1‑100 (MQ=25)
                                                         gCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                           >  2:985522/1‑100 (MQ=255)
                                                           cGGATAAGGCGTTAACGCCGCATCCGGCAATAGTGATCGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttcc                                         <  2:108705/100‑3 (MQ=255)
                                                             gATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCaa                                       >  1:1531819/1‑100 (MQ=255)
                                                              aTAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGTTGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                      <  2:1531801/100‑1 (MQ=255)
                                                               tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                     <  1:754552/100‑1 (MQ=255)
                                                                aaGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATca                                    <  2:263970/100‑1 (MQ=255)
                                                                aaGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATca                                    <  1:1692921/100‑1 (MQ=255)
                                                                 aGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcac                                   >  1:555618/1‑100 (MQ=255)
                                                                 aGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcac                                   >  1:1353573/1‑100 (MQ=255)
                                                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                  >  1:1938854/1‑100 (MQ=255)
                                                                   gctttAACGCCGCATCCGGCAATGATGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcac                                   <  1:194246/95‑1 (MQ=255)
                                                                   gCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcat                                 <  2:2319434/100‑1 (MQ=255)
                                                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                               <  1:771406/100‑1 (MQ=255)
                                                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                               <  2:1713161/100‑1 (MQ=255)
                                                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                               <  2:1076756/100‑1 (MQ=255)
                                                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAAGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                               <  1:937033/100‑1 (MQ=255)
                                                                       tAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatc                             >  1:2211739/1‑100 (MQ=255)
                                                                        aaCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatca                            >  2:1169170/1‑100 (MQ=255)
                                                                         aCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatcat                           >  1:1277687/1‑100 (MQ=255)
                                                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCg                         >  2:1994253/1‑100 (MQ=255)
                                                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCg                         <  1:2369025/100‑1 (MQ=255)
                                                                            ccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGc                        >  2:1373812/1‑100 (MQ=255)
                                                                              gcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCa                      <  2:100981/100‑1 (MQ=255)
                                                                                 tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                   <  2:1731810/100‑1 (MQ=255)
                                                                                       aaTGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCg             <  1:157176/100‑1 (MQ=255)
                                                                                          ggTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATTATTTCAATCACATCATCATCGCCAGGCTTACCGCCa          >  1:1684318/1‑100 (MQ=255)
                                                                                           gTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCAc         >  2:270533/1‑100 (MQ=255)
                                                                                             gtaCGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGCTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACtt       <  2:1456292/98‑1 (MQ=255)
                                                                                               aCGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCCTTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAg     <  2:1395149/100‑1 (MQ=255)
                                                                                                cGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc    >  1:1109712/1‑100 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagctta   <  2:1630001‑M2/100‑66 (MQ=255)
                                                                                                  aTGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttac  <  1:1959644‑M2/100‑67 (MQ=255)
                                                                                                   |                                                                                                  
ACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGC  >  NC_000913/2592925‑2593122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.