New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2618037NA (NA)7 (0.090) 6/166 NT NA intergenic (+100/+38) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
?NC_000913 = 2618053 NA (NA)intergenic (+116/+22) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation

Only 100 of 113 total aligned reads displayed.

GATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCGACG  >  NC_000913/2617938‑2618136
                                                                                                   |                                                                                                   
  tgtgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                                                                                                    <  1:1520869/99‑1 (MQ=255)
    tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                                                                 >  2:1899284/1‑100 (MQ=255)
    tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                                                                 >  1:1514054/1‑100 (MQ=255)
    tgCTCCAACGCTCGGTGATGCACATTGCCGTATGCGACGCTTGCCACGTCTTATCCGGCCAAAGAATAATATGGATTAACTTCGCGTAGTTCGGATAAgg                                                                                                 <  2:2119987/100‑1 (MQ=255)
     gCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATacggc                                                                                                >  2:1513108‑M1/1‑95 (MQ=255)
     gCTCCATCGCTAGTTGAAGCACATTGCCGAATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                                                                                                >  2:882112/1‑100 (MQ=255)
       tCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                                                                                                >  2:2043899/1‑98 (MQ=255)
        ccATCGCTAGTTGAAACACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGACATACGAATACTATGGATTAACTTCACGTAGTTCGGATAAGGCGtt                                                                                             >  2:377536/1‑100 (MQ=38)
         cATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTc                                                                                            >  2:1148350/1‑100 (MQ=255)
             gCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCgcgc                                                                                        >  1:1510897/1‑100 (MQ=255)
               tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg                                                                                      <  2:909102/100‑1 (MQ=255)
                  ttGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCat                                                                                   <  1:833693‑M2/100‑3 (MQ=255)
                   tggaGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc                                                                                  <  1:249017/97‑1 (MQ=255)
                   tGAAGCACATTGCCGGATTCGACGCTAGCCACGTCTTATCCAGCCTACGAATACTATGGATTACCTTCGCGTAGTACGGATATGCCATTCGggccctat                                                                                   >  2:188139/1‑95 (MQ=21)
                   tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatc                                                                                  >  1:955123‑M2/1‑97 (MQ=255)
                    gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatcc                                                                                 <  1:371122‑M1/100‑21 (MQ=255)
                     aaGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccg                                                                                <  2:1097255‑M1/100‑22 (MQ=255)
                      aGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGACTACTCTGGCTTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatcc                                                                                 <  2:537519‑M2/98‑5 (MQ=255)
                      aGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatccg                                                                                >  2:582190‑M2/1‑94 (MQ=255)
                       gCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                                                              <  1:2398743/100‑1 (MQ=255)
                       gCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                                                              >  2:1780750/1‑100 (MQ=255)
                       gCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                                                              >  1:1195580/1‑100 (MQ=255)
                        ctcattGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaac                                                                             <  1:94874‑M1/98‑25 (MQ=255)
                        cacaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc                                                                              <  2:62885/99‑1 (MQ=255)
                         acaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaact                                                                            <  1:1588857‑M1/100‑26 (MQ=255)
                         acaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaact                                                                            <  1:2310527‑M1/100‑26 (MQ=255)
                          caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt                                                                           >  2:1050230/1‑100 (MQ=255)
                           aTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATa                                                                          <  2:1420182/100‑1 (MQ=255)
                            ttGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTGCGAATACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaactacg                                                                         <  2:1618115‑M1/100‑29 (MQ=255)
                            ttGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATaa                                                                         >  1:1003662/1‑100 (MQ=255)
                              gCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCCCATCCGACAATAAac                                                                       >  1:655030/1‑100 (MQ=255)
                                 ggATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                                                                    >  1:1190013/1‑100 (MQ=255)
                                 ggATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                                                                    <  2:2109485/100‑1 (MQ=255)
                                    tGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTa                                                                 <  1:1899306/100‑1 (MQ=255)
                                     gccgttcTTGCCACGTCTTATCCGGTCTACGAATACTATGTATTAACTTCGCGTAGTTCGGATAAGACGTTCGCGCCGCATCCGACAATAAACACCTTAt                                                                <  2:1384878/94‑1 (MQ=38)
                                        aCGCTTGCCACGTCTTGTCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTa                                                             <  2:1395847/100‑1 (MQ=255)
                                        aCGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTa                                                             <  1:196255/100‑1 (MQ=255)
                                         cGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTAc                                                            <  1:660559/100‑1 (MQ=255)
                                         cGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGACGTTCGCGCCGCATCCGACAATAAACACCTTATCTAc                                                            <  2:1284355/100‑1 (MQ=255)
                                          gCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACa                                                           <  2:1195569/100‑1 (MQ=255)
                                            ttGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAAc                                                         <  2:1850931/100‑1 (MQ=255)
                                            ttGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAAc                                                         <  1:727131/100‑1 (MQ=255)
                                               ccACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtat                                                      <  1:1157852‑M2/100‑32 (MQ=255)
                                               ccACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTc                                                      >  1:2229162/1‑100 (MQ=255)
                                                cACGTCTTATCCGGCCTACGAATACTAGGGATAAACTTCGCATAGTTCGGATAAGGCGTTCGCGCTGCATCCGACAATTAACACCTTATCTCCAACTTCa                                                     <  2:577905/100‑1 (MQ=38)
                                                  cGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGa                                                   >  2:808780/1‑100 (MQ=255)
                                                   gTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGaa                                                  >  2:87662/1‑100 (MQ=255)
                                                    tCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAt                                                 >  2:536370/1‑100 (MQ=255)
                                                     cTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtt                                                >  2:2864/1‑100 (MQ=255)
                                                      ttATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAttt                                               >  2:2181408/1‑100 (MQ=255)
                                                       tATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttc                                              <  1:308027/100‑1 (MQ=255)
                                                        aTCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttct                                             >  1:2125100/1‑100 (MQ=255)
                                                          ccGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt                                           >  1:621971/1‑100 (MQ=255)
                                                          ccGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt                                           >  2:2083354/1‑100 (MQ=255)
                                                          ccGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt                                           >  1:692024/1‑100 (MQ=255)
                                                          ccGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt                                           >  1:1098596/1‑100 (MQ=255)
                                                          acGGCCTACGAATACTATGGAATAACTTCGCGTAGTTCAGATAAGACATTCGCGCCGCATCCGACAATAAACAACTTATCTAAAACTTCAGAAtttcttt                                           >  2:1424446/2‑100 (MQ=255)
                                                           cGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc                                          <  1:805300/100‑1 (MQ=255)
                                                           cGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc                                          <  2:1882605/100‑1 (MQ=255)
                                                           cGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc                                          <  2:1949340/100‑1 (MQ=255)
                                                           cGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTCCAGAAtttctttc                                          <  1:1609961/100‑1 (MQ=255)
                                                               cTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACaa                                      >  2:2240696/1‑100 (MQ=255)
                                                                 aCGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCTCCGCATCCGACAATACACACCTTATCTACAACTTCAGAATTTCTTTCACAAAc                                    <  2:1678492/100‑1 (MQ=255)
                                                                 aCGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCTTCCGACAATAAACACCTTATCTACTACTTTAGAATTTCTTTCACAAAc                                    <  2:755271/100‑1 (MQ=255)
                                                                 aCGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAAc                                    >  1:451215/1‑100 (MQ=255)
                                                                    aaTACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACgg                                  <  2:742181/99‑1 (MQ=255)
                                                                    aaTACTATGGATTAACTTCGCGTACTTCGGATAAGGCGTTCGCGACGCATCCTCCAATAAACACCTTATCTACAACTCAAGCATTtcactcac                                        >  2:2237471/1‑93 (MQ=255)
                                                                     aTACTATGGATTAACTTCGCGTAGTTCGGATgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtgg                                <  1:1157852‑M1/100‑70 (MQ=255)
                                                                       aCTATGGATTAACTTCGCGTAGTTCGGATAAGGAGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATg                              <  2:872237/100‑1 (MQ=255)
                                                                        cTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAAt                               >  1:1652183/1‑98 (MQ=255)
                                                                        cTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATgg                             <  2:429259/100‑1 (MQ=255)
                                                                        cTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATgg                             >  1:1946477/1‑100 (MQ=255)
                                                                        cTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATgg                             >  2:68642/1‑100 (MQ=255)
                                                                           tGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCa                          >  1:1265194/1‑100 (MQ=255)
                                                                            ggATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAg                         >  1:988920/1‑100 (MQ=255)
                                                                            ggATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAAAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAg                         >  2:1329642/1‑100 (MQ=255)
                                                                             gactcaCTTCGCGCAGTTAAGATAAGGCCTTCGCGCCGCATCAGACAATAAACACCTTATCTAAAACTTCAGAATTTACTTCACACACGGAATGGTGAgn                        <  2:2384679/95‑2 (MQ=255)
                                                                              aTTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCt                       >  2:1078616/1‑100 (MQ=255)
                                                                                tAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTa                     <  1:149372/100‑1 (MQ=255)
                                                                                  aCTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACg                   >  2:917465/1‑100 (MQ=255)
                                                                                         gTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGcgcg            <  1:2068015/100‑1 (MQ=255)
                                                                                         gTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGcgcg            <  1:1417923/100‑1 (MQ=255)
                                                                                          tAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCgg           <  1:2243764/100‑1 (MQ=255)
                                                                                           aGTTCGGATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgt          <  1:1588857‑M2/100‑76 (MQ=255)
                                                                                           aGTTCGGATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgt          <  1:2310527‑M2/100‑76 (MQ=255)
                                                                                            gTTCGGATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgag         <  1:94874‑M2/100‑77 (MQ=255)
                                                                                            gTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTa         >  1:882533/1‑100 (MQ=255)
                                                                                            gTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTa         >  1:726038/1‑100 (MQ=255)
                                                                                             ttCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTAGCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTaa        <  1:1078626/100‑1 (MQ=255)
                                                                                               cGGATgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgtgct       >  2:582190‑M1/1‑5 (MQ=255)
                                                                                               cGGATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgtgctt      <  2:1097255‑M2/100‑80 (MQ=255)
                                                                                               cGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTaa        <  2:380779/98‑1 (MQ=255)
                                                                                                ggATgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgtgcttc     <  2:196252‑M1/100‑97 (MQ=255)
                                                                                                ggATgcggcgcgaacgacttatccgaaataagcgaagttaatccatagtattcgtaggccggataagacatgacaagcgtcgcatccggcaatgtgctt      >  2:1049276‑M1/1‑4 (MQ=255)
                                                                                                ggATAAGGCGTTCGCGCCGCatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgtgcttc     <  1:371122‑M2/100‑81 (MQ=255)
                                                                                                ggATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCg     <  2:692016/100‑1 (MQ=255)
                                                                                                ggATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCg     <  2:1098586/100‑1 (MQ=255)
                                                                                                 gATgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaatgtgcttca    >  1:955123‑M1/1‑3 (MQ=255)
                                                                                                   tAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCGAc   >  2:246229/1‑99 (MQ=255)
                                                                                                   tAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCGACg  >  2:246208/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCACAAACGGAATGGTCAGCTTACGTTGCGCGGTAATCGACG  >  NC_000913/2617938‑2618136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.