BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3546222 =	NA (NA)	6 (0.070)	4/166	NT	NA	noncoding (1/36 nt)	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3546254 =	NA (NA)	6 (0.070)	4/166	NT	NA	noncoding (33/36 nt)	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 126 total aligned reads displayed.

CGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAATT  >  NC_000913/3546155‑3546352

gcggggaaacgaaccgaggatttgacaaagcaatgctgcgccaacgtctggcacatgttcaacgtagGCCCGATGCGACGCTAAAGCGTCATTTCGGGcc                                                                                                    >  1:1404663‑M1/68‑100 (MQ=255)

 gcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCt                                                                                                   >  1:235900/1‑100 (MQ=255)

    aTCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCACGATGCGACGCTAAAGCGTCATTTCGGGCCTAc                                                                                                 >  2:1949182/1‑99 (MQ=255)

       tcACCGAACACCGTCGCGGCGAACTCTCCTACTACTAAGTTATCCCCTCTTTTTTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTg                                                                                             <  2:2194008/100‑1 (MQ=255)

       tcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTg                                                                                             >  2:1261149/1‑100 (MQ=255)

       tcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTg                                                                                             <  2:183640/100‑1 (MQ=255)

        ctccGAACACCAGAGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                                                            >  1:1627366/3‑100 (MQ=255)

        cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                                                            >  2:2021391/1‑100 (MQ=255)

          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                                                          <  1:2205765/100‑1 (MQ=255)

          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                                                          <  2:797546/100‑1 (MQ=255)

          ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                                                          >  2:46846/1‑100 (MQ=255)

            gAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAt                                                                                        >  2:2011303/1‑100 (MQ=255)

            gAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAt                                                                                        >  1:2031588/1‑100 (MQ=255)

               gaggatttgacaaagcaatgctgcgccaacgtctggcatatgttcaacgtagGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                                                     >  2:92374‑M1/53‑100 (MQ=255)

               cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                                                     <  2:1811054/100‑1 (MQ=255)

               cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                                                     <  1:652966/100‑1 (MQ=255)

                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                                                   <  1:2021413/100‑1 (MQ=255)

                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                                                   >  1:1835668/1‑100 (MQ=255)

                 ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                                                   <  1:1300968/100‑1 (MQ=255)

                   aGCGCGGCGAACACTGCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                                                 <  2:1868409/100‑1 (MQ=255)

                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                                                 >  1:2271236/1‑100 (MQ=255)

                   aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTCTAGATTGCCCGATGCGACGATAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                                                 >  2:1305814/1‑100 (MQ=255)

                        ggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACg                                                                              <  2:971072/98‑1 (MQ=255)

                        ggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGt                                                                             >  2:809195/1‑99 (MQ=255)

                         gcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGa                                                                                >  1:601110/1‑95 (MQ=255)

                          cgAACACTCCTACTACTAAATTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCATCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTgg                                                                          >  2:2043556/1‑100 (MQ=255)

                           gAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgc                                                                         >  2:1376039/1‑100 (MQ=255)

                           gAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgc                                                                         >  1:2060424/1‑100 (MQ=255)

                             acacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcgc                                                                       >  2:635498/1‑100 (MQ=255)

                               acTCCTACTACTAAGTTATCCACTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCTTCATTTCGGGCCTACGTTGAAAATGTGCCAGACGTTGTCgcag                                                                     >  2:886473/1‑100 (MQ=255)

                                ccccTTCTACTCAGTTATCCCATCTTTTGTAGATTGCCAGATGCGACGCAAAAGCGCCCTTTAGGGCCTAGTTTGAAGATGTGCCAGACGTTGGCgcagc                                                                    >  2:1482515/3‑100 (MQ=255)

                                cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCTAGACGTTGGCgcagc                                                                    >  2:1058404/1‑100 (MQ=255)

                                cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcaac                                                                    >  1:760604/1‑98 (MQ=255)

                                 tCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcagc                                                                    <  2:1520978/99‑1 (MQ=255)

                                   ctactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAtt                                                                 <  1:1376053/100‑1 (MQ=255)

                                   ctactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAtt                                                                 <  2:970173/100‑1 (MQ=255)

                                   ctactactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCAt                                                                  <  2:5172/99‑1 (MQ=255)

                                     actactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGc                                                               >  2:2131710/1‑100 (MQ=255)

                                      ctactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCt                                                              >  2:1518609/1‑100 (MQ=255)

                                       tactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCtt                                                             <  2:232983/100‑1 (MQ=255)

                                        actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                                                            >  1:1554397/1‑100 (MQ=255)

                                         ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                                                           <  2:1857037/100‑1 (MQ=255)

                                         ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                                                           >  2:1557493/1‑100 (MQ=255)

                                         ctaAGTTATCCCCTCTTTTATAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGAGCAGCATTGCtt                                                             >  2:1424437/1‑98 (MQ=255)

                                          taAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGt                                                          >  1:1213763/1‑100 (MQ=255)

                                           aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                                                         <  1:1364719/100‑1 (MQ=255)

                                             gTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaa                                                       >  1:2354687/1‑100 (MQ=255)

                                             gTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaa                                                       >  2:276375/1‑100 (MQ=255)

                                              ttATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaaa                                                      >  2:1718052/1‑100 (MQ=255)

                                                aTCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATc                                                    >  2:1002155/1‑100 (MQ=255)

                                                 tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                                                   >  1:1283266/1‑100 (MQ=255)

                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                                                 >  2:2399911/1‑100 (MQ=255)

                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                                                 >  1:1611493/1‑100 (MQ=255)

                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                                                 >  1:2076061/1‑100 (MQ=255)

                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                                                 >  2:230887/1‑100 (MQ=255)

                                                   cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                                                 <  1:943692/100‑1 (MQ=255)

                                                    ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCg                                                >  1:1307982/1‑100 (MQ=255)

                                                      tctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGt                                              <  2:1464800/100‑1 (MQ=255)

                                                       ctTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGtt                                             >  1:240143/1‑100 (MQ=255)

                                                        ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc                                            <  1:448930/100‑1 (MQ=255)

                                                        ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc                                            >  1:200766/1‑100 (MQ=255)

                                                         tttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCg                                           <  2:1940700/100‑1 (MQ=255)

                                                          ttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCg                                           <  2:302563/99‑1 (MQ=255)

                                                             tAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACTTTGAACATGTGCCAGACGTTGGCGAAGCATTGCTTTGTCAAATCCTCGGTTCGTTTc                                       <  2:646798/100‑1 (MQ=255)

                                                             tAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTc                                       >  1:17697/1‑100 (MQ=255)

                                                             tAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTc                                       <  1:121701/100‑1 (MQ=255)

                                                                  ggcccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgc                                  >  1:1404663‑M2/34‑100 (MQ=255)

                                                                   gcccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgcg                                 >  1:2400945‑M2/33‑100 (MQ=255)

                                                                   gcccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgcg                                 >  1:902686‑M2/33‑100 (MQ=255)

                                                                   gcccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCATCGGTTCGTTTCCCcgcg                                 >  2:2101555‑M2/33‑100 (MQ=255)

                                                                   GCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgcg                                 <  1:166903‑M1/100‑1 (MQ=255)

                                                                   GCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgcg                                 >  2:963280‑M1/1‑100 (MQ=255)

                                                                   GCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgcg                                 <  1:616929‑M1/100‑1 (MQ=255)

                                                                    cccgaaatgacgctttagcgtcgcatcgggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGa                                >  1:1326710‑M2/32‑100 (MQ=255)

                                                                    CCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGa                                <  1:1938885‑M1/100‑1 (MQ=255)

                                                                    CCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGa                                <  1:1969383‑M1/100‑1 (MQ=255)

                                                                    CCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGAAGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGa                                <  2:1472735‑M1/100‑1 (MQ=255)

                                                                     CCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGat                               <  1:366803‑M1/100‑1 (MQ=255)

                                                                          gCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAatat                          >  2:2253776/1‑100 (MQ=255)

                                                                           cGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATg                         <  2:1213752/100‑1 (MQ=255)

                                                                           cGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATg                         >  1:882656/1‑100 (MQ=255)

                                                                              cGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGAcc                      >  2:1101139/1‑100 (MQ=255)

                                                                               gCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCa                     <  2:1675206/100‑1 (MQ=255)

                                                                               gCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCa                     <  1:1873739/100‑1 (MQ=255)

                                                                                 tAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAAc                   >  2:2341314/1‑100 (MQ=255)

                                                                                  aaaGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAAcc                  <  1:2005787/100‑1 (MQ=255)

                                                                                     gCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACctct               >  1:1170896/1‑100 (MQ=255)

                                                                                     gCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACctct               >  2:1443761/1‑100 (MQ=255)

                                                                                       gTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCa             >  2:2366017/1‑100 (MQ=255)

                                                                                       gTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCa             >  2:1410720/1‑100 (MQ=255)

                                                                                        tCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCAt            <  1:1745971/100‑1 (MQ=255)

                                                                                         cATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATa           >  1:1051507/1‑100 (MQ=255)

                                                                                          aTTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATaa          >  2:1195211/1‑100 (MQ=255)

                                                                                           tttCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATaat         <  2:1314296/100‑1 (MQ=255)

                                                                                            ttCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATaatt        <  1:2011325/100‑1 (MQ=255)

                                                                                                ggcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTaaa    <  1:1714225‑M2/97‑1 (MQ=255)

                                                                                                 gcCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTCCGTTTCCCCGAGATAATATGACCAACCTTTCATAATttaatt   <  1:1617229‑M2/98‑3 (MQ=255)

                                                                                                  cCTACGTTTAACATGTGCCAGACGTTTGCGCAGCATTGATTTGTCAAATCCTCGGTTCGTTGCCCCGCGATAATATGACCAACCTCTCATAATTTAAAtt  <  2:1473543‑M2/99‑1 (MQ=255)

                                                                                                  cCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGTTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAAtt  <  1:553887‑M2/99‑1 (MQ=255)

                                                                                                  cCTACGTTGAACATGTGCCAGACGTTGACGCAGCATTGCTTTGTAAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAAtt  >  2:2309126‑M2/2‑100 (MQ=255)

CGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGCGATAATATGACCAACCTCTCATAATTTAAATT  >  NC_000913/3546155‑3546352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.