New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3650712 =NA (NA)4 (0.050) 3/164 NT NA noncoding (1/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3650744 = NA (NA)noncoding (33/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 143 total aligned reads displayed.

GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843
                                                                                                   |                                                                                                   
 gTAAGTGTCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    <  1:703597/100‑1 (MQ=255)
 gTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    <  2:539074/100‑1 (MQ=255)
  tgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    >  1:1449785‑M1/66‑99 (MQ=255)
  tAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  1:2148132/1‑100 (MQ=255)
     gcgcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACaa                                                                                                <  1:36435/100‑1 (MQ=255)
     gcgcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACaa                                                                                                <  1:1473837/100‑1 (MQ=255)
      cgcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTAATTTATGTCGGATGCGACGCTAGCGCGTCCTATCCAAACTACaa                                                                                                >  1:985273/1‑99 (MQ=38)
       gcCTGAAATAAAGCGGCTATAT‑TCCCCCACAGGTTGTTAGAAAAATGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTTTTATCCGACCTACAAAGt                                                                                             >  1:2039440/1‑100 (MQ=37)
        ccTGAAATAAAGCAGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAg                                                                                              <  1:1033626/99‑1 (MQ=255)
         cTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGtt                                                                                            >  2:344072/1‑100 (MQ=255)
          tGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTCGCGCGTCTTATCCGACCTACAAAGTTa                                                                                           >  1:898160/1‑100 (MQ=255)
           gAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          >  2:1180441/1‑100 (MQ=255)
            aaaTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          <  1:634414/99‑1 (MQ=255)
            aaaTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATg                                                                                         <  1:2381276/100‑1 (MQ=255)
             aaTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGa                                                                                        >  1:1940052/1‑100 (MQ=255)
                    cggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                                                 <  2:1323248/100‑1 (MQ=255)
                     ggcgATATCCCCCCCACAGTATGTTAAAAAAGTGCGCTTTATTTATGTCGGATCCGACGCTGGCACGTCTTATCCGACCTAAAAAGTTATGaaaa                                                                                     >  2:315540/1‑95 (MQ=37)
                     ggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                                                 <  2:1894542/99‑1 (MQ=255)
                     ggcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGa                                                                                >  1:1885754/1‑100 (MQ=255)
                      gcgTTATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTTGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                                                 <  2:2135125/98‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGATCTACAAAGTTATGAAAATTCGAt                                                                               <  2:300704/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGa                                                                                <  2:2025198/99‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  2:1172807/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  1:545226/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  2:184355/100‑1 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              <  1:1337403/100‑1 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              <  1:1922240/100‑1 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              <  2:2381831/100‑1 (MQ=255)
                        gATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGa                                                                             >  2:814012/1‑100 (MQ=255)
                           atCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATa                                                                          >  1:1892277/1‑100 (MQ=255)
                              ccccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTa                                                                       <  2:1301582/100‑1 (MQ=255)
                              ccccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTa                                                                       >  1:2269984/1‑100 (MQ=255)
                               cccccACAGGTTGTTTGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTAt                                                                      >  2:1844758/1‑100 (MQ=255)
                               cccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTAt                                                                      <  1:2283633/100‑1 (MQ=255)
                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                                                     <  1:1587990/100‑1 (MQ=255)
                                  ccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGtt                                                                   <  1:692341/100‑1 (MQ=255)
                                   cacaGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTa                                                                  >  2:1629733/1‑100 (MQ=255)
                                   cacaGGTTGTTAGAAAAGTGCGCTATATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTa                                                                  <  2:1516860/100‑1 (MQ=255)
                                     caGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTAtt                                                                <  1:306539/100‑1 (MQ=255)
                                           gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAACGTTATGAAAATTCGATGAATAGTATGTTATTTGTAgg                                                          <  2:1277343/100‑1 (MQ=255)
                                           gttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTACCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAgg                                                          >  2:225637/1‑100 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        <  2:601178/100‑1 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        >  1:1162639/1‑100 (MQ=255)
                                              aGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCt                                                       >  1:799512/1‑100 (MQ=255)
                                               gAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTg                                                      >  1:1310561/1‑100 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    >  1:2376654/1‑100 (MQ=255)
                                                    gTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAgg                                                 <  2:1996835/100‑1 (MQ=255)
                                                    gTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAgg                                                 <  2:1797095/100‑1 (MQ=255)
                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGc                                                >  2:711315/1‑99 (MQ=255)
                                                      gcgcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCg                                               <  2:2380606/100‑1 (MQ=255)
                                                        gcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTa                                             <  1:1023608/100‑1 (MQ=255)
                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTa                                             >  1:1072124/1‑99 (MQ=255)
                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg                                            >  1:1818651/1‑100 (MQ=255)
                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAg                                            >  1:1944660/1‑100 (MQ=255)
                                                         cTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTACGTTATTTGTAGGCCTGa                                                     >  2:2199275/1‑91 (MQ=255)
                                                          tttatttaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc                                           <  2:530792/100‑1 (MQ=255)
                                                          cgatcttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc                                           <  1:729528/95‑1 (MQ=255)
                                                           ttatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcg                                          <  1:2192793/100‑1 (MQ=255)
                                                              tttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCAt                                       >  1:1197979/1‑100 (MQ=255)
                                                                tatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcagatcg                                     >  2:729520/1‑94 (MQ=255)
                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  <  1:1358352‑M1/100‑1 (MQ=255)
                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  >  1:1722991‑M1/1‑100 (MQ=255)
                                                                   GTCGGATGCGACACTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  <  1:1577314‑M1/100‑1 (MQ=255)
                                                                      GGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               <  1:575423‑M1/100‑1 (MQ=255)
                                                                       gataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtt                              >  1:1143638‑M2/29‑100 (MQ=255)
                                                                        ATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAttt                             >  2:1733971‑M1/1‑100 (MQ=255)
                                                                         TGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGTATCAGGCGAtttt                            <  1:1431854‑M1/100‑1 (MQ=255)
                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTg                           <  2:1444570/100‑1 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          >  2:2299807/1‑100 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          <  2:1096645/100‑1 (MQ=255)
                                                                            gACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCt                         >  1:1419895/1‑100 (MQ=255)
                                                                              cGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAt                       >  2:1024038/1‑100 (MQ=255)
                                                                               gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAtt                      <  2:2200928/100‑1 (MQ=255)
                                                                                 tGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCCATTTTGCTATTTa                    <  1:1614462/100‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTaca                  <  2:600376/98‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAAGAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCATGCGATTTTGCTATTTAcaca                <  2:479778/100‑1 (MQ=255)
                                                                                       ttCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGt              <  2:1193954/99‑1 (MQ=255)
                                                                                       gTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGt              <  2:1730635/100‑1 (MQ=255)
                                                                                       gTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGt              <  2:2293949/100‑1 (MQ=255)
                                                                                        tCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTa             >  1:1193965/1‑100 (MQ=255)
                                                                                        tCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTa             >  1:1478848/1‑100 (MQ=255)
                                                                                         cTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTAc            <  1:2229490/100‑1 (MQ=255)
                                                                                          ttATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACt           >  2:1751070/1‑100 (MQ=255)
                                                                                           tttccgacCTACAAAGCTATGAAAATTAGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGCCGATTTTGATATTTACACAGTACTc          >  2:950096‑M2/9‑100 (MQ=255)
                                                                                           tATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTc          <  2:1859115/100‑1 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         <  2:2335910‑M2/93‑1 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         >  2:1932786‑M2/8‑100 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         <  2:1279098‑M2/93‑1 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTc          >  1:1261557‑M2/8‑99 (MQ=255)
                                                                                             tccgacTTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc        <  1:1406985‑M2/94‑1 (MQ=255)
                                                                                             tccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAGTTACACAGTACTccc        >  1:2369240‑M2/7‑100 (MQ=255)
                                                                                              ccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCt       >  2:2268411‑M2/6‑100 (MQ=255)
                                                                                              ccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCt       >  1:76031‑M2/6‑100 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc        <  1:1583010‑M2/94‑1 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCt       <  1:1260691‑M2/95‑1 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  1:1667231‑M2/5‑100 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGACTGACAGGAGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  2:360404‑M2/5‑100 (MQ=255)
                                                                                                gacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGc     >  1:617480‑M2/4‑100 (MQ=255)
                                                                                                 acCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCg    <  1:1301721‑M2/98‑1 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  <  1:579427/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.