New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3674441NA (NA)9 (0.110) 5/164 NT NA noncoding (61/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3674473 NA (NA)noncoding (93/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 167 total aligned reads displayed.

AAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATA  >  NC_000913/3674374‑3674571
                                                                                                   |                                                                                                  
    tAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCtata                                                                                                <  1:329906/100‑1 (MQ=255)
      ngCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATAGCATCCGGCTATAAt                                                                                              >  1:2362135/2‑100 (MQ=255)
      ggCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAAt                                                                                              >  2:1738489/1‑100 (MQ=255)
       gCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg                                                                                             <  1:672410/100‑1 (MQ=255)
        ccGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgc                                                                                            >  1:1883503/1‑100 (MQ=255)
        ccGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgc                                                                                            <  1:1126581/100‑1 (MQ=255)
         cGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgcg                                                                                           <  1:470515/100‑1 (MQ=255)
          ggATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATgcgc                                                                                          <  1:1379754/100‑1 (MQ=255)
            aTGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGcac                                                                                        <  2:1299434/100‑1 (MQ=255)
              gcggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGcaca                                                                                       >  2:1270635/1‑99 (MQ=255)
                ggcgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATaa                                                                                    <  1:1179309/100‑1 (MQ=255)
                  cgTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAAcc                                                                                  >  2:2131533/1‑100 (MQ=255)
                   gTAAACGCCTTATCCGGCATACAAATTTATTCGGCCTGCCTCCCCGTAGGCCGGATAAGATGCGCCAGAACCGCATCCGGCTATAATGCGCACATAACct                                                                                 >  2:1436139/1‑100 (MQ=38)
                    tttacgccgcaTCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctc                                                                                >  1:1280992/11‑100 (MQ=255)
                    tttacgccgcaTCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctc                                                                                >  1:1270773/11‑100 (MQ=255)
                    tAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctc                                                                                >  1:97644/1‑100 (MQ=255)
                     aaaCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACctct                                                                               <  1:2322589/100‑1 (MQ=255)
                      aaCGACTTATCCGGCATAAGATTTTATACGGCATTTCTCTCAGTAGGCCGGTTAAGATGCACAAACATCGCATTCGCCTATAATGCGCACATAAACTCtt                                                                              >  2:756714/1‑100 (MQ=255)
                       aCGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTg                                                                             >  2:1216229/1‑100 (MQ=255)
                        cGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGa                                                                            <  2:298618/100‑1 (MQ=255)
                        cGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGa                                                                            >  2:731863/1‑100 (MQ=255)
                          ccTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGaaa                                                                          >  2:509531/1‑100 (MQ=255)
                          ccTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGCCTATAATGCGCACATAACCTCTTaaaa                                                                          >  1:905460/1‑100 (MQ=255)
                            ttATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACt                                                                        <  2:832021/100‑1 (MQ=255)
                            ttATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACt                                                                        <  1:1903116/100‑1 (MQ=255)
                              aTCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCg                                                                      <  1:1466060/100‑1 (MQ=255)
                               tCCGGCATACCATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGAGCGAGCATCGCATCCGGCTATCAGGCGAAAGTAAGCTCTTGCAAcac                                                                       >  2:2358925/1‑96 (MQ=21)
                                 ctgCATACGATTTTATTGGGTCTGGCTCCCCGTAGGCCGGATAAGATGTGCCAGCATCGCATCCGGCTATTATGCGTACATAACTTCTTGAAACTCGTcc                                                                   <  2:645415/98‑1 (MQ=25)
                                 cGGTATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTcc                                                                   <  1:704900/100‑1 (MQ=255)
                                 cGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCGCTTGAAACt                                                                        <  2:2027806/95‑1 (MQ=255)
                                   gCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCAGGATAAGATGCGCAAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTcccc                                                                 <  2:174269/100‑1 (MQ=255)
                                     aTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCag                                                               <  2:2266172/100‑1 (MQ=255)
                                     aTACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCag                                                               <  2:1604520/100‑1 (MQ=255)
                                        cGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGc                                                            <  1:1791285/100‑1 (MQ=255)
                                        cGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGc                                                            >  1:1806435/1‑100 (MQ=255)
                                           ttttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCctc                                                         <  1:1583940/100‑1 (MQ=255)
                                             ttATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCtt                                                       <  2:2333272/100‑1 (MQ=255)
                                              tATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCttt                                                      <  2:1539965/100‑2 (MQ=255)
                                              tATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTc                                                      <  2:244612/100‑1 (MQ=255)
                                              tATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTc                                                      >  1:1298759/1‑100 (MQ=255)
                                                ttCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                                                    <  2:1364573/100‑1 (MQ=255)
                                                ttCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAg                                                    <  1:83374/100‑1 (MQ=255)
                                                 tCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGc                                                   <  1:42106/100‑1 (MQ=255)
                                                   ggCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCa                                                 >  1:2258698/1‑100 (MQ=255)
                                                    gCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCAt                                                >  1:1151102/1‑100 (MQ=255)
                                                         gCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATc                                               <  1:1946903/96‑1 (MQ=255)
                                                            ccccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccgg                                        <  1:101022‑M2/100‑61 (MQ=255)
                                                            ccccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTgg                                        <  2:2058211/100‑1 (MQ=255)
                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg                                       <  2:858448/100‑1 (MQ=255)
                                                             cccGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTggg                                       <  1:570582/100‑1 (MQ=255)
                                                               gccaGGCCGAATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAg                                     >  1:1465449/4‑100 (MQ=255)
                                                               cGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAg                                     <  1:1216240/100‑1 (MQ=255)
                                                               cGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAg                                     <  2:1264444/100‑1 (MQ=255)
                                                               cGTAGGCCAGTTAAGATGCGCCAGCATCGCGTCCGGCTATAATGCGCACATAACCGCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAg                                     <  2:446498/100‑1 (MQ=39)
                                                                gTAGGCCGGATATGATGCGCCAGCATTGCATTCTGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCATAGCCTCTTCAGCCATCTATTTGGGAg                                     <  2:2132869/99‑1 (MQ=255)
                                                                gTAGGCCGGATAATATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAg                                     <  1:2034031/99‑1 (MQ=255)
                                                                gTAGGCCGGATAAGATGCTCCAGCATCTAATCCGGCTATAATGCGCACATAACCTCTCGAAACTCATCCCCATAGCCTCTTCAGCCATCTATTTGGGAg                                     <  2:2181459/99‑1 (MQ=38)
                                                                 tatgctgtaTAAGATGCGTCAGCATCGTATCTGTTTATAATGCGCACATAATCTCTTGAATCTCGTCCCCTGAGCCTCTTCAGCCATCTATTTGGGAGCa                                   <  2:381651/92‑1 (MQ=255)
                                                                  aGGCCGGATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatacggccaa                                    <  1:613594‑M2/98‑65 (MQ=255)
                                                                  aGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTAGAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCaa                                  >  1:1691797/1‑100 (MQ=255)
                                                                   ggCCGGATAAGATGCGCCAGCATCGCATCCGGTctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattt                                 <  1:119530‑M2/100‑68 (MQ=255)
                                                                   ggCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCaaa                                 >  1:2087630/1‑100 (MQ=255)
                                                                   ggCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCaaa                                 >  1:2108053/1‑100 (MQ=255)
                                                                    gCCGGATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctatttt                                <  1:371725‑M2/100‑69 (MQ=255)
                                                                    gCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAAc                                >  1:922946/1‑100 (MQ=255)
                                                                    gCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAAc                                <  2:1579351/100‑1 (MQ=255)
                                                                      cGGATAAGATGCGCCAGCATCGCATCAGGCTATAATGCGCACAAAAACTCTTGAAACTCGTCCACAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACa                               <  2:303397/99‑1 (MQ=38)
                                                                       ggATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaag                             <  1:2269481‑M2/100‑72 (MQ=255)
                                                                       ggATAAGATGCGCCAGCATCGCATCCGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaag                             <  1:278556‑M2/100‑72 (MQ=255)
                                                                       ggATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAAt                             >  1:1564790/1‑100 (MQ=255)
                                                                       ggATAAGATGCGCCAGCAACGAATCCGGCctacggggagccaggccgaataaaatcgtatgacggataaggcgattacgccgcatccggcctatttta                               <  2:1045224‑M2/98‑70 (MQ=255)
                                                                       ggATAAGATGCGCCAGCAACACATCAAGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaa                              <  2:355821‑M2/99‑71 (MQ=255)
                                                                        gATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAAtt                            >  1:2056672/1‑100 (MQ=255)
                                                                          tAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAAttt                           >  2:2087360/1‑99 (MQ=255)
                                                                            aGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCAt                        <  2:53479/100‑1 (MQ=255)
                                                                            aGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCAt                        >  1:1148032/1‑100 (MQ=255)
                                                                              aTGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTc                      >  1:877032/1‑100 (MQ=255)
                                                                               tGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTcc                     <  2:1883481/100‑1 (MQ=255)
                                                                               tGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTcc                     >  1:882222/1‑100 (MQ=255)
                                                                               tGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTcc                     >  2:1404181/1‑100 (MQ=255)
                                                                                gcgcCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCa                    <  2:27342/100‑1 (MQ=255)
                                                                                 cgcCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCaa                   >  2:106440/1‑100 (MQ=255)
                                                                                  gcCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAAc                  <  1:1006675/100‑1 (MQ=255)
                                                                                   ccAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACt                 <  1:1884350/100‑1 (MQ=255)
                                                                                    cAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTc                <  1:835328/100‑1 (MQ=255)
                                                                                     aGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCa               <  2:163890/100‑1 (MQ=255)
                                                                                      gcatcgcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCAt              <  2:1608593/100‑1 (MQ=255)
                                                                                         tcgcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAAc           >  1:1430424/1‑100 (MQ=255)
                                                                                           gcatcCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAAccc         >  1:1334348/1‑100 (MQ=255)
                                                                                               ccGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaaggctgcgttttccccggcattcgcg     >  1:1840708‑M2/1‑5 (MQ=255)
                                                                                               ccGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGc     <  2:2259501/100‑1 (MQ=255)
                                                                                                cGGCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaaggctgcgttttccccggcattcgcg     <  2:1499149‑M2/99‑96 (MQ=255)
                                                                                                 gggctacggggagcgaggccgaataaaatcgtatgccggataaggcgtttacggcgcatccggcctattttaaggctgcgttttccccggcattcgcggg   >  2:1808006‑M2/1‑3 (MQ=255)
                                                                                                 ggCctacggggagccaggccgaataaaatcgtatgccggataaggcgtttacgccgcatccggcctattttaaggctgtgttttccccggcattcgcggg   >  1:1013071‑M2/1‑3 (MQ=255)
                                                                                                 ggCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCat   <  2:1878558/100‑1 (MQ=255)
                                                                                                 ggCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCat   >  1:1602742/1‑100 (MQ=255)
                                                                                                 ggCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCat   <  2:1879511/100‑1 (MQ=255)
                                                                                                  gCctacggggagccaggccgaataaaatcgtatgccggataattcgtttacgccgcatccggcctattttaagtctgcgttttccccggcattcgcggg   >  2:322175‑M2/1‑2 (MQ=255)
                                                                                                  gCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCata  >  2:1089302/1‑100 (MQ=255)
                                                                                                  gCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAAAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCat   <  2:1184094/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
AAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATGCGCACATAACCTCTTGAAACTCGTCCCCAGAGCCTCTTCAGCCATCTATTTGGGAGCAAACAATTTCATTCCAACTCATAACCCCAGCATA  >  NC_000913/3674374‑3674571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.