New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4622972 =104 (1.200)3 (0.040) 3/166 NT 3.1% coding (1204/1332 nt) yjjJ putative protein kinase
?NC_000913 4623004 = 93 (1.150)coding (1236/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 135 total aligned reads displayed.

TGATGCTGCCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTA  >  NC_000913/4622905‑4623103
                                                                                                   |                                                                                                   
tGATGCTGCCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCaga                                                                                                     >  2:1774363/1‑100 (MQ=255)
    gctgcCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATc                                                                                                 >  2:612294/1‑100 (MQ=255)
      tgcCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGAtaag                                                                                               >  1:793356/1‑97 (MQ=255)
      tgcCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCcg                                                                                               >  2:349783/1‑100 (MQ=255)
      tgcCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCcg                                                                                               >  2:1348400/1‑100 (MQ=255)
      agcCATTTAGGTAAAGTTTGATCATAACGTCAGTAAAAGCGCTTGGTTAACGCCGATCCCGCTCGCGCAACAGTTTTGTCAAACGGTCGCCAGAGATCcg                                                                                               >  2:395722/2‑100 (MQ=255)
       gcCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCcgc                                                                                              >  2:189687/1‑100 (MQ=255)
        ccATTGAGGTGAAGTTTGAACTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCcgcg                                                                                             >  2:2013894/1‑100 (MQ=255)
           ttttttccggcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCcg                                                                                               >  1:48347‑M1/57‑95 (MQ=255)
            tGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATc                                                                                         >  1:2084223/1‑100 (MQ=255)
             gAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCa                                                                                        >  1:1249568/1‑100 (MQ=255)
              aGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAg                                                                                       >  1:819846/1‑100 (MQ=255)
               ggTGAACTTTGCTTTTAAAGTCAGAAAAAGCGCTGGGTTAACGGCGATTGCGCTAGCGCAACAGGACTGGTAAACGGTCGCCAGAGATCCGCGTATCa                                                                                        >  2:937042/1‑98 (MQ=255)
                gTGAAGTTTGATCGTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCg                                                                                     <  1:1390221/100‑1 (MQ=255)
                 tGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGa                                                                                    >  2:2341356/1‑100 (MQ=255)
                  gAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAg                                                                                   <  2:1923436/100‑1 (MQ=255)
                  gAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAg                                                                                   >  2:1746684/1‑100 (MQ=255)
                    gcatttcttgcgcaatgtggcgaaacgcctcgctgatacgcggatctCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGc                                                                                 >  1:1036119‑M1/48‑100 (MQ=255)
                    aGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGc                                                                                 >  1:1114970/1‑100 (MQ=255)
                    aGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCAGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGc                                                                                 >  1:549596/1‑100 (MQ=255)
                      tttGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGt                                                                               <  2:113586/100‑1 (MQ=255)
                       ttGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGtt                                                                              <  1:731504/100‑1 (MQ=255)
                       ttGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGtt                                                                              >  2:209324/1‑100 (MQ=255)
                          aTCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCg                                                                           >  1:2290314/1‑100 (MQ=255)
                            cTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGcc                                                                         >  1:453134/1‑100 (MQ=255)
                            cTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGcc                                                                         <  2:934813/100‑1 (MQ=255)
                             ttAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCca                                                                        <  2:81073/100‑1 (MQ=255)
                                aCGTCAGTAAAAGCGCTTGGTTAAGGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACAt                                                                     <  2:1052708/100‑1 (MQ=255)
                                aCGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACAt                                                                     <  1:133637/100‑1 (MQ=255)
                                 cGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCTCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTATCGCCACAtt                                                                    >  2:1569305/1‑100 (MQ=255)
                                  gTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTg                                                                   <  2:2084201/100‑1 (MQ=255)
                                    ccgatctaGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTgcg                                                                 <  2:1672902/93‑1 (MQ=255)
                                    cAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTgcg                                                                 >  2:221515/1‑100 (MQ=255)
                                      gTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCa                                                               >  1:1445009/1‑100 (MQ=255)
                                       tAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCaa                                                              <  2:1363563/100‑1 (MQ=255)
                                        aaaaGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACCTTGCGCAAg                                                             >  1:935079/1‑100 (MQ=255)
                                        aaaaGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAg                                                             <  2:2380131/100‑1 (MQ=255)
                                         aaaGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGa                                                            >  1:371994/1‑100 (MQ=255)
                                           aGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGaaa                                                          >  1:2163802/1‑100 (MQ=255)
                                            gcgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAAt                                                         <  2:536117/100‑1 (MQ=255)
                                            gcgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAAGCGTTTCGCCACATTGCGCAAGAAAt                                                         >  1:753352/1‑100 (MQ=255)
                                             cgcTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATg                                                        <  2:2211238/100‑1 (MQ=255)
                                              gcctcgctgatacgcggatctctggcgaccgtttgccagaactgctgcgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGc                                                       >  1:1036119‑M2/54‑100 (MQ=255)
                                                ttGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCg                                                     <  1:1397314/100‑1 (MQ=255)
                                                ttGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCg                                                     <  1:577468/100‑1 (MQ=255)
                                                ttGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCg                                                     <  2:1114960/100‑1 (MQ=255)
                                                 tGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCgg                                                    <  1:261149/100‑1 (MQ=255)
                                                  ggTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGa                                                   <  1:1751198/100‑1 (MQ=255)
                                                  gcttAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCATTTTGCGCAAGAAATGCCGGa                                                   <  2:1448474/98‑1 (MQ=255)
                                                     tAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGaaaa                                                >  2:1438249/1‑100 (MQ=255)
                                                     tAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGaaaa                                                <  1:267811/100‑1 (MQ=255)
                                                      aaCGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGaaaaa                                               >  1:1871262/1‑100 (MQ=255)
                                                        cGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAAt                                             >  1:436678/1‑100 (MQ=255)
                                                        cGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAAt                                             >  1:1697630/1‑100 (MQ=255)
                                                        cGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAAt                                             >  2:1803420/1‑100 (MQ=255)
                                                        cGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAAt                                             >  1:2127553/1‑100 (MQ=255)
                                                          gCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATcc                                           <  1:166650/100‑1 (MQ=255)
                                                          gCGATCCCGCAGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGTAAGAAATAACAGAAAAAAt                                             <  2:1991994/98‑1 (MQ=255)
                                                           cGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCg                                          <  2:673103/100‑1 (MQ=255)
                                                            gATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTGGCCACATTGCGCAAGAAATGCCGGAAAAAATCCgg                                         <  2:144074/100‑1 (MQ=255)
                                                            gATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCgg                                         <  2:1224839/100‑1 (MQ=255)
                                                             aTCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGc                                        >  2:84275/1‑100 (MQ=255)
                                                              tctcGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCa                                       <  1:2032119/97‑1 (MQ=255)
                                                              gatctctggcgaccgtttgccagaactgctgcgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCa                                       >  1:424018‑M2/38‑100 (MQ=255)
                                                                ccGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCaaa                                     >  1:2097469/1‑100 (MQ=255)
                                                                ccGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCaaa                                     >  2:379918/1‑100 (MQ=255)
                                                                   CTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATTCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCg                                  >  1:643206‑M1/1‑100 (MQ=255)
                                                                    TGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATc                                   >  1:310763‑M1/1‑98 (MQ=255)
                                                                    TGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGa                                 >  1:1025281‑M1/1‑100 (MQ=255)
                                                                      GCGCGGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAag                               >  1:1359969‑M1/1‑100 (MQ=255)
                                                                      GCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAag                               >  1:1511049‑M1/1‑100 (MQ=255)
                                                                      GCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAag                               >  2:2163777‑M1/1‑100 (MQ=255)
                                                                       CGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCACGAAATGCCGGAAAAAATCCGGCAAATCGAaga                              <  2:315926‑M1/100‑1 (MQ=255)
                                                                       CGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAaga                              >  1:1998399‑M1/1‑100 (MQ=255)
                                                                        GCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAagag                             <  1:245806‑M1/100‑1 (MQ=255)
                                                                        GCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGACGGAAAAAATCAGACAAATagaaga                              <  2:1263871‑M1/99‑1 (MQ=255)
                                                                          agcagTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGaa                           >  1:701111/1‑100 (MQ=255)
                                                                          agcagTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGaa                           <  2:1170584/100‑1 (MQ=255)
                                                                             agTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGt                        >  1:1474119/1‑100 (MQ=255)
                                                                                tCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGc                     >  1:886885/1‑100 (MQ=255)
                                                                                 cTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGcc                    <  1:1529964/100‑1 (MQ=255)
                                                                                   ggCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCg                  <  1:1886664/100‑1 (MQ=255)
                                                                                     cAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCa                >  2:862031/1‑100 (MQ=255)
                                                                                      aaaCGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCa                <  2:1314580/99‑1 (MQ=255)
                                                                                      aaaCGGTCCCCAGAGATCCGTGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCa                <  2:1083724/99‑1 (MQ=255)
                                                                                             cgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCggg        <  1:940947‑M2/94‑1 (MQ=255)
                                                                                             cgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCggg        <  2:2127529‑M2/94‑1 (MQ=255)
                                                                                             cgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCggg        <  1:567782‑M2/94‑1 (MQ=255)
                                                                                             cgccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCggg        >  1:2292912‑M2/7‑100 (MQ=255)
                                                                                              gccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGTCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGt       >  1:1664527‑M2/6‑100 (MQ=255)
                                                                                              gccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGt       >  2:1561985‑M2/6‑100 (MQ=255)
                                                                                              gccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGt       <  1:395430‑M2/95‑1 (MQ=255)
                                                                                               ccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTa      >  1:196269‑M2/5‑100 (MQ=255)
                                                                                               ccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTa      <  2:161082‑M2/96‑1 (MQ=255)
                                                                                               ccagAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTa      <  1:1174787‑M2/96‑1 (MQ=255)
                                                                                               ccagAGAGCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGt       <  2:1050894‑M2/95‑1 (MQ=255)
                                                                                                 agAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAAc    >  1:1915977‑M2/3‑100 (MQ=255)
                                                                                                 agAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAAc    <  1:1314252‑M2/98‑1 (MQ=255)
                                                                                                  gAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATTGGCGGGTaa     >  1:151849‑M2/2‑98 (MQ=255)
                                                                                                   agaTCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTa  <  1:475447/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGATGCTGCCATTGAGGTGAAGTTTGATCTTAACGTCAGTAAAAGCGCTTGGTTAACGGCGATCCCGCTGGCGCAGCAGTTCTGGCAAACGGTCGCCAGAGATCCGCGTATCAGCGAGGCGTTTCGCCACATTGCGCAAGAAATGCCGGAAAAAATCCGGCAAATCGAAGAGAAAGTTGCCCGCATGGGCGGGTAACTA  >  NC_000913/4622905‑4623103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.