New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4634391 =97 (1.120)9 (0.110) 6/164 NT 9.6% coding (595/648 nt) ytjC phosphatase
?NC_000913 4634423 = 81 (1.020)coding (627/648 nt) ytjC phosphatase
Rejected: Frequency below cutoff threshold.

Only 100 of 133 total aligned reads displayed.

CTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTAT  >  NC_000913/4634324‑4634522
                                                                                                   |                                                                                                   
cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                                                     <  1:204912/100‑1 (MQ=255)
cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                                                     <  1:4224/100‑1 (MQ=255)
 tGTTCTATTTCGCGCGTGGATTATGAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAt                                                                                                    <  1:395292/100‑1 (MQ=255)
  gcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                                                   >  1:1404517‑M1/66‑100 (MQ=255)
  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                                                   >  1:795331/1‑100 (MQ=255)
   ttCTATTTCGCGCTTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGTGACATCTCGCATCTGGACGCCCGTGCAtt                                                                                                   <  2:60966/99‑1 (MQ=255)
   ttCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                  <  2:215168/100‑1 (MQ=255)
   ttCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                  <  1:364873/100‑1 (MQ=255)
   ttCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                  <  1:2112496/100‑1 (MQ=255)
   cccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                  >  1:561595‑M1/65‑100 (MQ=255)
    tCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                  >  1:1419183/1‑99 (MQ=255)
      tATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                                                               <  2:57495/100‑1 (MQ=255)
      tATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                                                               >  1:404735/1‑100 (MQ=255)
      aattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                                                               >  2:1923400‑M1/62‑100 (MQ=255)
       aTTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATg                                                                                              >  1:398261/1‑100 (MQ=255)
         taatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAg                                                                                            >  1:1680792‑M1/59‑100 (MQ=255)
             ctcgTGGATTATCAGGAAAGCCTGTTGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGc                                                                                        <  2:1834389/98‑1 (MQ=255)
             cgcgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGc                                                                                        >  1:1958571/1‑100 (MQ=255)
               cgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg                                                                                      <  1:1362628/100‑1 (MQ=255)
                gTGGATTATCAGTAAATCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg                                                                                      <  1:202636/99‑1 (MQ=255)
                 tGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCg                                                                                    <  2:1844935/100‑1 (MQ=255)
                 tGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCg                                                                                    >  1:347468/1‑100 (MQ=255)
                   gATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGtt                                                                                  >  2:967073/1‑100 (MQ=255)
                   gATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGtt                                                                                  >  1:1469473/1‑100 (MQ=255)
                    aTTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTa                                                                                 <  2:933859/100‑1 (MQ=255)
                     ttATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCGTGCATTAGATGAGCTGCAGCGTTaa                                                                                >  1:1423063/1‑100 (MQ=255)
                     ttATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTaa                                                                                >  1:1585155/1‑100 (MQ=255)
                      tATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAac                                                                               >  2:1535621/1‑100 (MQ=255)
                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                                                              <  2:10571/100‑1 (MQ=255)
                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                                                              <  1:2078497/100‑1 (MQ=255)
                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                                                              >  2:127641/1‑100 (MQ=255)
                          agtaaaGCCAGTCGCTGGCGTCTTGCTGGGTCTTTGAAACCGCATGAGACATCTCGCAACTGCACGCCCTTGGATTATTTGTGCTGCAGCGTTAacgacg                                                                           <  2:289328/97‑1 (MQ=255)
                           ggAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACgg                                                                          <  1:410885/100‑1 (MQ=255)
                               aGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCg                                                                      <  1:1503573/100‑1 (MQ=255)
                               aGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCg                                                                      <  2:1585135/100‑1 (MQ=255)
                                gCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCgg                                                                     <  1:934428/100‑1 (MQ=255)
                                     tggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATca                                                                <  1:1355292/100‑1 (MQ=255)
                                      ggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcag                                                               >  1:984497/1‑100 (MQ=255)
                                      ggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcag                                                               <  2:1749498/100‑1 (MQ=255)
                                       gctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcagc                                                              <  1:1104649/100‑1 (MQ=255)
                                          ggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGt                                                           <  1:1965966/100‑1 (MQ=255)
                                              tCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTcac                                                       <  1:918384/100‑1 (MQ=255)
                                                tggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAg                                                     >  1:1787738/1‑100 (MQ=255)
                                                tggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAg                                                     <  2:594110/100‑1 (MQ=255)
                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGc                                                    >  2:223592/1‑100 (MQ=255)
                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGc                                                    >  1:1503067/1‑100 (MQ=255)
                                                       gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAt                                              >  1:1375671/1‑100 (MQ=255)
                                                       gTCGTTGAAACCGCAGAGGACATCTCGCATCTGGACGCCACTGCATTAGATGAGCTGCAGCGTTACCGACGGATCGGAATCAGCAGTTCACAGCGTAGAt                                              >  2:361098/1‑100 (MQ=255)
                                                        tCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAtt                                             <  1:1537953/100‑1 (MQ=255)
                                                         ctcatctaatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTa                                            >  1:1680792‑M2/43‑100 (MQ=255)
                                                          gTTGCAACCGCAGGGGACATATAGCATATGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTaa                                           >  2:1326715/1‑100 (MQ=255)
                                                          gTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTaa                                           >  1:866481/1‑100 (MQ=255)
                                                          gTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTaa                                           >  1:343413/1‑100 (MQ=255)
                                                            atctaatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAAtt                                         >  2:1923400‑M2/40‑100 (MQ=255)
                                                             tctaatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAAtt                                         >  1:2024746‑M2/39‑99 (MQ=255)
                                                               taatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg                                      >  1:900863‑M2/37‑100 (MQ=255)
                                                               taatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg                                      >  1:561595‑M2/37‑100 (MQ=255)
                                                                aatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGc                                     >  1:1724313‑M2/36‑100 (MQ=255)
                                                                aCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGc                                     <  1:840003/100‑1 (MQ=255)
                                                                aCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGc                                     >  2:2228807/1‑100 (MQ=255)
                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg                                    <  1:724976/100‑1 (MQ=255)
                                                                    caggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAtc                                 >  2:2328442‑M2/32‑100 (MQ=255)
                                                                    caggggcgtccagatgcgaaatgtccactgcATTAGATGAGCTGCAGCGTTAACGACGGATCAGAATCAGCAGTTAACAGCGTAGATTAATTGGACGAtc                                 >  2:1829898‑M2/32‑100 (MQ=255)
                                                                    CAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAtc                                 <  1:1111394‑M1/100‑1 (MQ=255)
                                                                      GGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGAGCGAtctc                               <  2:860427‑M1/100‑1 (MQ=255)
                                                                           cATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCt                          >  1:815065/1‑100 (MQ=255)
                                                                             tctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCttt                        >  2:949745/1‑100 (MQ=255)
                                                                              ctcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTg                       >  2:1340718/1‑100 (MQ=255)
                                                                                cGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGc                     <  1:276091/100‑1 (MQ=255)
                                                                                cGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGc                     <  1:26473/100‑1 (MQ=255)
                                                                                cGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGc                     >  1:1383965/1‑100 (MQ=255)
                                                                                  cATCTGGACACCCCTCCAATAAATGAGCTAAAACGTGAACGACGAAACGGAATAAACAGTTCACAGCGTAGATTAATTAAGCGATCTCACGc                           >  2:825533/1‑92 (MQ=255)
                                                                                   aTCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtc                  <  1:1708980/100‑1 (MQ=255)
                                                                                   aTCTGGACGCCCCTGCATGAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTg                       >  2:1590492/1‑95 (MQ=255)
                                                                                    tgtgtaCGCCCCTGCATTAGATGAGGTGCAGCGTTATCGACGCAGCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATTTCCCGCTTTGGCAtct                 <  2:2111990/95‑1 (MQ=255)
                                                                                    tCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtct                 >  1:244805/1‑100 (MQ=255)
                                                                                    tCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtct                 >  1:604779/1‑100 (MQ=255)
                                                                                      tGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc               >  1:1578204/1‑100 (MQ=255)
                                                                                      tGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc               >  1:2134303/1‑100 (MQ=255)
                                                                                      tGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttc               <  2:1444280/100‑1 (MQ=255)
                                                                                       ggACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct              >  1:1249249/1‑100 (MQ=255)
                                                                                       ggACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct              >  1:2102157/1‑100 (MQ=255)
                                                                                        gACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTg             <  1:2090740/100‑1 (MQ=255)
                                                                                            cccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCAGCTTTGGCATCTTCTGc            >  2:1432124‑M2/8‑97 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg        <  1:1126924‑M2/94‑1 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg        <  1:1780100‑M2/94‑1 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg        >  1:209166‑M2/7‑100 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg        >  2:1072231‑M2/7‑100 (MQ=255)
                                                                                              cctgcATTAGATGAGCAACAGCATTAACGACGGATCGCAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGc            >  2:510000‑M2/6‑95 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTACCGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgta      <  2:1419724‑M2/96‑1 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgta      >  2:508192‑M2/5‑100 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgta      <  2:848318‑M2/96‑1 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgt       <  1:1204746‑M2/95‑1 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgt       <  1:827869‑M2/95‑1 (MQ=255)
                                                                                                 gtaTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagt    >  1:398383/3‑100 (MQ=255)
                                                                                                 gcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagt    <  1:2011490‑M2/98‑1 (MQ=255)
                                                                                                 gcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtag     <  2:281167‑M2/97‑1 (MQ=255)
                                                                                                  cATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagta   >  2:2287282‑M2/2‑100 (MQ=255)
                                                                                                   aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagta   <  1:1441792/99‑1 (MQ=255)
                                                                                                   aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTAt  >  2:672982/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTAT  >  NC_000913/4634324‑4634522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.