New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4634944 =80 (0.920)7 (0.080) 3/170 NT 7.9% coding (367/870 nt) rob right oriC‑binding transcriptional activator, AraC family
?NC_000913 4634972 = 86 (1.040)coding (339/870 nt) rob right oriC‑binding transcriptional activator, AraC family
Rejected: Frequency below cutoff threshold.

Only 100 of 117 total aligned reads displayed.

GGAGTAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGG  >  NC_000913/4634873‑4635071
                                                                                                   |                                                                                                   
ggAGTAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATa                                                                                                     >  2:1714495/1‑100 (MQ=255)
ggAGTAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATa                                                                                                     >  2:1511478/1‑100 (MQ=255)
ggAGTAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATa                                                                                                     >  1:569232/1‑100 (MQ=255)
 cgcattcaagaagcagtttgcccagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATAc                                                                                                    >  1:1428358‑M1/71‑100 (MQ=255)
 cgcattcaagaagcagtttgcccagactcctgcactttaccgccgtgctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATAc                                                                                                    >  2:128788‑M1/71‑100 (MQ=255)
  gcattcaagaagcagtttgctcagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATAc                                                                                                    >  1:626011‑M1/70‑99 (MQ=255)
  gcattcaagaagcagtttgcccagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATAcc                                                                                                   >  1:410407‑M1/70‑100 (MQ=255)
  gcattcaagaagcagtttgcccagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATAcc                                                                                                   >  2:326435‑M1/70‑100 (MQ=255)
    tAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGTGCGAATACCaa                                                                                                 <  2:1254881/100‑1 (MQ=255)
     ttcaagaagcagtttgcccagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATACCaaa                                                                                                >  1:1456190‑M1/67‑100 (MQ=255)
      gCTCTGGGTAACACCAATCAGCGTCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAg                                                                                               <  2:881700/100‑1 (MQ=255)
       caagaagcagtttgcccagactcctgcactttaccgccgttctcctgaatggagcgcctttggtATTCACCCAGGCGTAGCGGCGGGCGAATACCaaa                                                                                                >  1:372820‑M1/65‑98 (MQ=255)
         ctGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGgcg                                                                                            >  1:1404446/1‑100 (MQ=255)
          tGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGgc                                                                                             <  2:44324/98‑1 (MQ=255)
             gTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTcc                                                                                        >  2:180121/1‑100 (MQ=255)
              tAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCa                                                                                       >  2:2319696/1‑100 (MQ=255)
                 cacCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATCGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGTCGCTCCAtt                                                                                     >  1:72019/1‑99 (MQ=255)
                 cacCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTc                                                                                    >  1:390309/1‑100 (MQ=255)
                 cacCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTc                                                                                    >  2:1201073/1‑100 (MQ=255)
                  acCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTc                                                                                    >  2:1461100/1‑99 (MQ=255)
                  acCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCa                                                                                   <  2:2385543/100‑1 (MQ=255)
                   ccAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAg                                                                                  <  1:989774/100‑1 (MQ=255)
                     aagcAGCGGGGGATCTTCCAGGGTGATGAATTTGTGCTCCGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAgg                                                                                 <  2:869403/96‑1 (MQ=255)
                     aaTCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAgg                                                                                 >  1:1747043/1‑99 (MQ=255)
                     aaTCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGga                                                                                >  1:683773/1‑100 (MQ=255)
                        cAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGaa                                                                             >  2:2126718/1‑100 (MQ=255)
                              cgTATCTTCCAGGGTGACAAATTTGTGCTCTTGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAAcggcgg                                                                       <  2:2281778/100‑1 (MQ=255)
                              cgTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAAcggcgg                                                                       <  1:1584325/100‑1 (MQ=255)
                              cgTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAAcggcgg                                                                       <  2:1819342/100‑1 (MQ=255)
                              cgTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAAcggcgg                                                                       <  1:546301/100‑1 (MQ=255)
                                tATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTa                                                                     >  1:1690466/1‑100 (MQ=255)
                                tATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTa                                                                     <  1:825542/100‑1 (MQ=255)
                                tATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTa                                                                     <  1:537681/100‑1 (MQ=255)
                                tATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTa                                                                     >  2:973092/1‑100 (MQ=255)
                                 aTCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTaa                                                                    >  1:953937/1‑100 (MQ=255)
                                   cTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAg                                                                  >  1:1486899/1‑100 (MQ=255)
                                   cTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAg                                                                  >  1:1486670/1‑100 (MQ=255)
                                   cTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAg                                                                  >  2:30557/1‑100 (MQ=255)
                                    ttCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGt                                                                 >  2:1647975/1‑100 (MQ=255)
                                     tCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTg                                                                >  1:1409830/1‑100 (MQ=255)
                                     tCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTg                                                                >  1:1494660/1‑100 (MQ=255)
                                       cAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCa                                                              <  2:683765/100‑1 (MQ=255)
                                       cAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCa                                                              >  1:1309735/1‑100 (MQ=255)
                                        aGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGc                                                               >  2:2221261/1‑98 (MQ=255)
                                         gggTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAgg                                                            <  2:1066059/100‑1 (MQ=255)
                                         gggTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAgg                                                            <  1:973103/100‑1 (MQ=255)
                                         gggTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAgg                                                            >  2:1733929/1‑100 (MQ=255)
                                         gggTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAgg                                                            <  1:1138405/100‑1 (MQ=255)
                                         gggTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAACGCGCTCCATTTAGGAGAACGGCGGTAAAGTGCAgg                                                            >  2:881642/1‑100 (MQ=255)
                                           gTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAgg                                                            <  1:1197470/98‑1 (MQ=255)
                                             gACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTc                                                        >  1:338733/1‑100 (MQ=255)
                                              aCAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCt                                                       >  1:1342414/1‑100 (MQ=255)
                                               cAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTg                                                      >  1:1951720/1‑100 (MQ=255)
                                                  aTTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGc                                                   <  1:1704878/100‑1 (MQ=255)
                                                      gtgCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAAc                                               <  1:1214397/100‑1 (MQ=255)
                                                         ctctGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGc                                            >  1:2378190/1‑100 (MQ=255)
                                                         ctctGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGc                                            >  2:657034/1‑100 (MQ=255)
                                                          tctGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGct                                           >  1:1124865/1‑100 (MQ=255)
                                                           ctGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGctt                                          >  2:62931/1‑100 (MQ=255)
                                                            tGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGcttc                                         <  2:280191/100‑1 (MQ=255)
                                                             ggCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGcttct                                        <  1:2188655/100‑1 (MQ=255)
                                                                aTAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGa                                     >  2:2071993/1‑100 (MQ=255)
                                                                aTAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGa                                     >  1:2329526/1‑100 (MQ=255)
                                                                 tttggtattcgcccgccgctacgcctgggtgaatACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTg                                      >  1:372820‑M2/35‑98 (MQ=255)
                                                                 tttggtattcgcccgccgctacgcctgggtgaatACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGaa                                    >  1:1456190‑M2/35‑100 (MQ=255)
                                                                 tAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGaa                                    <  2:353880/100‑1 (MQ=255)
                                                                  aGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGaa                                    >  1:592280/1‑99 (MQ=255)
                                                                  aGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAAt                                   <  2:1580343/100‑1 (MQ=255)
                                                                   gTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATg                                  >  1:604684/1‑100 (MQ=255)
                                                                    ggtattcgcccgccgctacgcctgggtgaatACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATgc                                 >  1:410407‑M2/32‑100 (MQ=255)
                                                                     gtattcgcccgccgctacgcctgggtgaatACCAAAGGCGCTCCATTCAGGAGCACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATgcg                                >  2:128788‑M2/31‑100 (MQ=255)
                                                                     gtattcgcccgccgctacgcctgggtgaatACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATgcg                                >  1:1428358‑M2/31‑100 (MQ=255)
                                                                       ATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGcgcg                              >  2:2111635‑M1/1‑100 (MQ=255)
                                                                       ATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGcgcg                              <  1:1583223‑M1/100‑1 (MQ=255)
                                                                         TCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCggg                            >  1:1040382‑M1/1‑100 (MQ=255)
                                                                          CACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGt                           >  2:1671984‑M1/1‑100 (MQ=255)
                                                                           aCCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCggg                            <  1:148865/98‑1 (MQ=255)
                                                                           aCCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTa                          <  1:157940/100‑1 (MQ=255)
                                                                            cccAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTaa                         >  1:1584269/1‑100 (MQ=255)
                                                                              cAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAAt                       >  1:1733400/1‑100 (MQ=255)
                                                                              cAGGCGTAGCGGCCGGCGAATACCAAAGGCGGTCCATTCAGGGGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAAt                       >  1:1620265/1‑100 (MQ=255)
                                                                                 gCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTc                    <  2:1733379/100‑1 (MQ=255)
                                                                                 gCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTc                    <  2:1487781/100‑1 (MQ=255)
                                                                                 gCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTc                    <  1:750669/100‑1 (MQ=255)
                                                                                     aGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGtt                <  1:964865/100‑1 (MQ=255)
                                                                                      gcggcgGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGtt                >  1:1022736/1‑99 (MQ=255)
                                                                                      gcggcgGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTg               <  1:737823/100‑1 (MQ=255)
                                                                                      gcggcgGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTg               <  2:1315916/100‑1 (MQ=255)
                                                                                      gcggcgGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTg               <  2:953926/100‑1 (MQ=255)
                                                                                        ggcgggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTgag             <  1:2319724/100‑1 (MQ=255)
                                                                                        ggcgggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTgag             <  2:1409815/100‑1 (MQ=255)
                                                                                        ggcgggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTgag             <  1:1569852/100‑1 (MQ=255)
                                                                                        ggcgggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTgag             >  2:1756532/1‑100 (MQ=255)
                                                                                          cggtcgAATACCAAAGGCGCTCCATGCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGagag           <  2:475352/100‑1 (MQ=255)
                                                                                          cgggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGagag           <  2:1371968/100‑1 (MQ=255)
                                                                                            ggcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGt          >  1:239082/1‑99 (MQ=255)
                                                                                             gcgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCg        >  2:2022381/1‑100 (MQ=255)
                                                                                              cgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGa       >  1:1704445/1‑100 (MQ=255)
                                                                                              cgAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGa       <  2:2257249/100‑1 (MQ=255)
                                                                                                   aCCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCgg  <  1:2126742/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGAGTAGCTCTGGGTAACACCAATCAGCGGCGTATCTTCCAGGGTGACAAATTTGTGCTCTGGCATAGTGAATTCACCCAGGCGTAGCGGCGGGCGAATACCAAAGGCGCTCCATTCAGGAGAACGGCGGTAAAGTGCAGGAGTCTGGGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGG  >  NC_000913/4634873‑4635071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.