New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 271191	NA (NA)	7 (0.090)	4/166	NT	NA	noncoding (651/1221 nt)	IS30	repeat region
	?	NC_000913	= 271214	NA (NA)					noncoding (674/1221 nt)	IS30	repeat region

AGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGA  >  NC_000913/271197‑271312                  |                                                                                                   aGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTg                   <  1:505217/99‑1 (MQ=11)  ggCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTggg                 <  2:865060/100‑1 (MQ=32)  ggCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTggg                 <  2:1223015/100‑1 (MQ=32)   gCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTgggg                >  1:1338735/1‑100 (MQ=32)   gCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTgggg                <  2:1159602/100‑1 (MQ=32)    cGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGc               >  2:2283633/1‑100 (MQ=32)     gTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGCACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCa              >  1:1159633/1‑100 (MQ=17)       cATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCAtt            >  1:1555066/1‑100 (MQ=33)        aTACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTg           <  2:2105766/100‑1 (MQ=33)        aTACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTg           <  2:1492438/100‑1 (MQ=33)         tACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTgg          <  2:398252/100‑1 (MQ=33)         tACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTgg          >  2:386498/1‑100 (MQ=33)         tACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTgg          >  2:1208216/1‑100 (MQ=32)         tACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTgg          >  1:2149751/1‑100 (MQ=32)          aCCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTggg         >  2:880301/1‑100 (MQ=32)          aCCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTgg          >  1:828533/1‑99 (MQ=32)           cccGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCAAGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTggg         >  2:1158904/1‑99 (MQ=17)            ccGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGa        >  2:923603/1‑99 (MQ=32)             cGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAgg      <  1:2327965/100‑1 (MQ=33)             cGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAgg      >  2:882787/1‑100 (MQ=33)             cGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAgg      <  2:901028/100‑1 (MQ=33)             cGCAAAGGCGAAAGAGGTACGATAAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAgg      >  2:2046200/1‑100 (MQ=17)             cGCAAAGGCGAAAGAGGTACGAATAAAATAGTGAACGGAACACCAATTAACGAAAAATCCCGAAATATCGATAACAAACGATCTCTGGGGCATTgaga        >  2:1995601/1‑98 (MQ=11)              gCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAggg     <  1:542133/100‑1 (MQ=33)               cAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTAACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGc    >  2:352670/1‑100 (MQ=18)                 aaGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGa  <  1:531005/100‑1 (MQ=33)                 aaGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGa  >  1:2195128/1‑100 (MQ=33)                  |                                                                                                   AGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGA  >  NC_000913/271197‑271312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.