New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1180448	NA (NA)	4 (0.050)	3/166	NT	NA	noncoding (95/96 nt)	RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 2655037	NA (NA)					noncoding (68/97 nt)	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

ACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAC  >  NC_000913/2654941‑2655135                                                                                                 |                                                                                                   acaATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccg                                                                                                 <  1:343491‑M2/100‑4 (MQ=255) acaATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGcc                                                                                                  <  1:246698‑M2/99‑3 (MQ=255)   aaTTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccgga                                                                                               <  2:1203085‑M2/100‑6 (MQ=255)     ttcattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATa                                                                                             <  1:1758900/100‑1 (MQ=255)       cattcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAg                                                                                           >  2:2077133/1‑100 (MQ=255)        attcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAgg                                                                                          <  2:1707564/100‑1 (MQ=255)          tcaACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCg                                                                                        <  2:1648660/100‑1 (MQ=255)           caACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGt                                                                                       >  2:429557/1‑100 (MQ=255)           caACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGt                                                                                       >  2:1502102/1‑100 (MQ=255)             aCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGttt                                                                                     <  2:1225826/100‑1 (MQ=255)             aCGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGttt                                                                                     <  1:278947/100‑1 (MQ=255)              cGTTTGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTa                                                                                    <  2:1587982/100‑1 (MQ=255)              cGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCg                                                                                        <  1:2064143/96‑1 (MQ=255)              cGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGttt                                                                                     <  2:1951144/99‑1 (MQ=255)               gTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                                   <  1:1469068/100‑1 (MQ=255)                   ggggCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  2:1333899/100‑1 (MQ=255)                   ggggCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  1:2347487/100‑1 (MQ=255)                        gcAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccggatgcggcgtaaacgccttatcc                                                                          >  1:2206263‑M2/1‑74 (MQ=255)                        gcAAATGCCTGATGCGCTACGCTTATCAGGCCTAAAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATca                                                                          >  2:736210/1‑99 (MQ=255)                         cAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                                         >  2:1364170/1‑100 (MQ=255)                         cAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                                         <  1:2332092/100‑1 (MQ=255)                          aaaTGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccggatgcggcgtaaacgccttatccgg                                                                        >  2:1901262‑M2/1‑72 (MQ=255)                          aaaTGCCTGATGCGCTACGCTTACATGGCCTACATGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccggatgcggcgtaaacgccttatccgg                                                                        >  2:1455465‑M2/1‑72 (MQ=255)                           aaTGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                                       <  1:691035/100‑1 (MQ=255)                            aTGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      <  2:2383385/100‑1 (MQ=255)                             tGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCat                                                                     >  2:1847008/1‑100 (MQ=255)                              gCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCata                                                                    >  2:167630/1‑100 (MQ=255)                                cTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAtt                                                                  <  1:1912555/100‑1 (MQ=255)                                cTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGAAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAtt                                                                  >  2:1377777/1‑100 (MQ=255)                                 tGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGccggatgcggcgtaaacgccttatccggcctaca                                                                  >  1:784934‑M2/1‑65 (MQ=255)                                 tGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTa                                                                 <  2:1922172/100‑1 (MQ=255)                                 tGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTa                                                                 >  1:1220493/1‑100 (MQ=255)                                  gATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAg                                                                <  2:2295458/100‑1 (MQ=255)                                        cTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAATGCGTTTACGCCGCATCCGGCATATTAGTTTACg                                                          <  2:1559099/100‑1 (MQ=255)                                        cTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACg                                                          >  1:875480/1‑100 (MQ=255)                                         tACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGc                                                         <  2:2106721/100‑1 (MQ=255)                                              tgagcAGTCCTACAAGGGATTCGCAATTTGTTGAAGTTGCAGAATTTGTAGCACGGATAAGGCGTTTATGCCGCATCCGGCATATTAGTTTACGCCGtga                                                    <  2:815768/96‑3 (MQ=21)                                                aTCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAAc                                                  >  2:932576/1‑100 (MQ=255)                                                aTCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAAc                                                  >  2:642669/1‑100 (MQ=255)                                                 tCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACa                                                 <  1:693093/100‑1 (MQ=255)                                                  cAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAg                                                <  2:1381503/100‑1 (MQ=255)                                                  cAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAg                                                >  2:1792839/1‑100 (MQ=255)                                                  cAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAg                                                >  2:585817/1‑100 (MQ=255)                                                   aGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGa                                               <  1:585820/100‑1 (MQ=255)                                                   aGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGa                                               <  1:1792860/100‑1 (MQ=255)                                                    ggCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAt                                              >  1:1173163/1‑100 (MQ=255)                                                    ggCCTACAAGGGAGTCGCAATCTATTGGATTTTCGCAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAt                                              >  1:1278954/1‑100 (MQ=21)                                                     gCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAtt                                             <  2:162859/100‑1 (MQ=255)                                                     gCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAtt                                             <  2:343488/100‑1 (MQ=255)                                                     gCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGAtt                                             <  1:1364184/100‑1 (MQ=255)                                                      ccTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTa                                            <  2:1769580/100‑1 (MQ=255)                                                       cTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGGCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                                           <  2:2347952/100‑1 (MQ=255)                                                       cTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                                           >  2:1444783/1‑100 (MQ=255)                                                        tACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                                           <  1:1193545/99‑1 (MQ=255)                                                        tACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGc                                          <  1:429560/100‑1 (MQ=255)                                                         aCAAGTGAGTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAg                                           <  2:2282969/98‑1 (MQ=255)                                                            aGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATc                                      >  1:1148895/1‑100 (MQ=255)                                                             gggATTCGCAAATTGTTGAATTTGCAGAAATTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATAAGCTTACGCCGTTAACAGATTAGCTAACg                                     >  2:1426498/1‑100 (MQ=25)                                                              ggATTCGCAATTTGTTGAATTTGCAGAATTTTTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTAt                                       <  2:1083523/97‑1 (MQ=255)                                                               gATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTg                                   <  2:1149619/100‑1 (MQ=255)                                                                  tCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgcgc                                >  2:1008273/1‑100 (MQ=255)                                                                  tCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTgcgc                                <  1:2185517/100‑1 (MQ=255)                                                                   cGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGca                               >  1:1005881/1‑100 (MQ=255)                                                                   cGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGca                               >  1:2006097/1‑100 (MQ=255)                                                                   cGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGca                               >  2:551168/1‑100 (MQ=255)                                                                    gCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGcac                              >  1:1443103/1‑100 (MQ=255)                                                                    gCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTACGcac                              >  1:5610/1‑100 (MQ=255)                                                                        tttGTTGAATTTGGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCa                          <  1:558860/100‑1 (MQ=255)                                                                          tgttgAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCaa                         >  2:1770163/1‑99 (MQ=255)                                                                          tgttgAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAg                        >  2:97572/1‑100 (MQ=255)                                                                              gAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTccc                    >  1:1983582/1‑100 (MQ=255)                                                                                 tttGCAGAATTTGTTTGTCGGATAAGGCTTTTACTCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTATCTATCGTGCGCACACCAAGTCCCGTa                 <  2:304716/100‑1 (MQ=38)                                                                                  ttGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAg                <  1:436748/100‑1 (MQ=255)                                                                                  ttGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAg                <  1:2036583/100‑1 (MQ=255)                                                                                   tGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgc               >  2:358542/1‑100 (MQ=255)                                                                                    gCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgcg              >  1:1283017/1‑100 (MQ=255)                                                                                    gCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgcg              <  1:1914777/100‑1 (MQ=255)                                                                                     cAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgcgc             >  1:2262689/1‑100 (MQ=255)                                                                                     cAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgcg              <  1:1203096/99‑1 (MQ=255)                                                                                     cAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAgcac             >  1:2177979/1‑98 (MQ=255)                                                                                      aGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGcc            >  2:1338433/1‑100 (MQ=255)                                                                                      aGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGcc            <  1:2204305/100‑1 (MQ=255)                                                                                      aGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGcc            >  1:340220/1‑100 (MQ=255)                                                                                       gAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGccc           <  1:2177265/100‑1 (MQ=255)                                                                                         aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTTGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGc         <  2:1534374/100‑1 (MQ=255)                                                                                         aTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGc         <  1:1435083/100‑1 (MQ=255)                                                                                            tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGccc           >  2:2261614/1‑95 (MQ=255)                                                                                               aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCa   >  1:2201731/1‑100 (MQ=255)                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAc  >  2:984618/1‑100 (MQ=255)                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAc  <  2:904397/100‑1 (MQ=255)                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAc  >  2:1086413/1‑100 (MQ=255)                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAc  <  1:2335324/100‑1 (MQ=255)                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGCTAACAGATTAGCTATCGTGTGCACACCAAGTCCCGTAGCGCCCGCAGACCAc  <  1:2281403/100‑1 (MQ=255)                                                                                                 |                                                                                                   ACAATTCATTCAACGTTCGGGGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATATTAGTTTACGCCGTTAACAGATTAGCTATCGTGCGCACACCAAGTCCCGTAGCGCCCGCAGACCAC  >  NC_000913/2654941‑2655135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.