New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1468681NA (NA)35 (0.810)
+ACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGG
11/90 NT NA noncoding (560/1331 nt) IS2 repeat region
?NC_000913 1650843 = NA (NA)noncoding (1/706 nt) IS2 repeat region

Only 100 of 309 total aligned reads displayed.

AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG  >  NC_000913/1650745‑1650941
                                                                                                  |                                                                                                  
aGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTa                                                                                                   >  2:1301828/1‑100 (MQ=255)
 gTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTAt                                                                                                  >  1:2224637/1‑100 (MQ=255)
    cacacaaaaTTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                               <  1:2042982/95‑1 (MQ=255)
    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                               <  2:2397540/100‑1 (MQ=255)
        gAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgct                                                                                           <  2:482952/100‑1 (MQ=255)
         aaaaTTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgctg                                                                                          >  1:1966351/1‑100 (MQ=255)
             ttCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATAGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCGATGGgcgc                                                                                            >  2:1510995/1‑94 (MQ=255)
              tCAACAGGAAAAATCAGGCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCg                                                                                     <  1:850542/100‑1 (MQ=255)
                 aCAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACGAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAg                                                                                  <  2:124552/100‑1 (MQ=255)
                    ggAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACa                                                                               >  2:555922/1‑100 (MQ=255)
                        catggtgtatacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgacgggTATGGAAGCAGCTTCGCAGACAGGCa                                                                           >  1:66760‑M2/75‑100 (MQ=255)
                         atggtgtatacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAg                                                                          >  1:1480648‑M2/74‑100 (MQ=255)
                          tggtgtatacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGa                                                                         >  2:2298205‑M2/73‑100 (MQ=255)
                              gtatacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACtt                                                                     >  1:1389819‑M2/69‑100 (MQ=255)
                                 tacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGa                                                                   >  2:1605038‑M2/66‑99 (MQ=255)
                                 cGGTCATTGCTGCCATTCATGGCGAATACAAGGAGGCATGGAAAACACTGGATGATTAACTGGCCTATGGGCTCTTTTTCGCAGACAGGGAGAACTTg                                                                    <  2:226147/98‑1 (MQ=255)
                                   gTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATgg                                                                >  1:2324198/1‑100 (MQ=255)
                                   gTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATgg                                                                <  2:2067940/100‑1 (MQ=255)
                                     cATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTa                                                              <  2:754046/100‑1 (MQ=255)
                                               tccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGAt                                                    >  1:1701551‑M2/52‑100 (MQ=255)
                                               aTTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGAt                                                    <  2:1739508/100‑1 (MQ=255)
                                                ttCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   <  1:2276220/100‑1 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   >  2:288462‑M2/51‑100 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   >  1:1001877‑M2/51‑100 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   >  1:347011‑M2/51‑100 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   <  1:432062‑M2/50‑1 (MQ=255)
                                                ccgtatacaccatgttataggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCCGAACTTGATGGTATGCATGCGAt                                                    >  2:796840‑M2/51‑99 (MQ=255)
                                                 cgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCa                                                  >  2:274851‑M2/50‑100 (MQ=255)
                                                  gtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCaa                                                 <  2:1845635‑M2/52‑1 (MQ=255)
                                                   tatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAAt                                                >  1:1198176‑M2/48‑100 (MQ=255)
                                                   tatacaccatgttatcggagagctgccaacgtatgggtatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAATTTGATGGTATGCCTGCGATCAAt                                                >  2:1147752‑M2/48‑100 (MQ=255)
                                                    atacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                               >  2:1445899‑M2/47‑100 (MQ=255)
                                                    atacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                               <  1:1990140‑M2/54‑1 (MQ=255)
                                                    atacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                               <  2:1712883‑M2/54‑1 (MQ=255)
                                                      gcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCATCACAGACACGCAGAACTTGATAGCATGCCTGCGATAAATccc                                             >  2:1461665/1‑100 (MQ=255)
                                                      acaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             <  2:1885342‑M2/56‑1 (MQ=255)
                                                       gaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCa                                            >  2:910575‑M2/44‑100 (MQ=255)
                                                       caccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGCCAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCa                                            >  2:640511‑M2/44‑100 (MQ=255)
                                                       caccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTGCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCa                                            <  1:280354‑M2/57‑1 (MQ=255)
                                                         ccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCaaa                                          >  1:37562‑M2/42‑100 (MQ=255)
                                                          catgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAAc                                         >  1:314796‑M2/41‑100 (MQ=255)
                                                           atgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACg                                        >  1:636067‑M2/40‑100 (MQ=255)
                                                           atgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACg                                        <  2:1095300‑M2/61‑1 (MQ=255)
                                                             gttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtg                                      <  1:576499‑M2/63‑1 (MQ=255)
                                                             gttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtg                                      >  1:1535275‑M2/38‑100 (MQ=255)
                                                             cAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCaaaag                                        >  1:122180/1‑96 (MQ=255)
                                                              ttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtgt                                     >  1:769314‑M2/37‑100 (MQ=255)
                                                              ttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtgt                                     >  1:140967‑M2/37‑100 (MQ=255)
                                                              ttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtgt                                     <  1:1948540‑M2/64‑1 (MQ=255)
                                                               tatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                    >  1:1305491‑M2/36‑100 (MQ=255)
                                                                ntcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGttt                                   >  2:2178569‑M2/35‑100 (MQ=255)
                                                                atcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGttt                                   >  2:934831‑M2/35‑100 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAc                                 >  2:1652675‑M2/32‑99 (MQ=255)
                                                                    gagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCGTGCGATCAATGCCAAACGTATTTACCg                               >  2:2046236‑M2/31‑100 (MQ=255)
                                                                     cATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTTCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGCGTTTACCgg                              <  2:2234711/100‑1 (MQ=255)
                                                                     agagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                              >  1:711801‑M2/30‑100 (MQ=255)
                                                                     agagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                              <  2:1989961‑M2/71‑1 (MQ=255)
                                                                        gctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATc                           >  2:328659‑M2/27‑100 (MQ=255)
                                                                        gctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATc                           <  1:993135‑M2/74‑1 (MQ=255)
                                                                        gctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATc                           >  1:1748024‑M2/27‑100 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:802652‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          >  2:127209‑M2/26‑100 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:2203024‑M2/75‑1 (MQ=255)
                                                                          tgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          >  2:11755‑M2/25‑99 (MQ=255)
                                                                           gccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATg                        >  2:415654‑M2/24‑100 (MQ=255)
                                                                           gccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATg                        >  1:1475599‑M2/24‑100 (MQ=255)
                                                                            ccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgc                       <  2:2100094‑M2/78‑1 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcg                      >  1:2170219‑M2/22‑100 (MQ=255)
                                                                              agcgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGCTCAATGCCAAACGTGTTTACCGGATCATgcgc                     >  1:1625032‑M2/21‑100 (MQ=255)
                                                                              aacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcgc                     <  1:2020825‑M2/80‑1 (MQ=255)
                                                                              aacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcgc                     <  2:362864‑M2/80‑1 (MQ=255)
                                                                               acgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGcc                    <  2:1398419‑M2/81‑1 (MQ=255)
                                                                                cgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCa                   >  1:1645229‑M2/19‑100 (MQ=255)
                                                                                 tGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAg                  <  1:1788325/100‑1 (MQ=255)
                                                                                 tGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAg                  <  1:1353944/100‑1 (MQ=255)
                                                                                 gtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAg                  <  2:734545‑M2/83‑1 (MQ=255)
                                                                                 gtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAg                  <  1:918353‑M2/83‑1 (MQ=255)
                                                                                  tatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                 <  1:1583336‑M2/84‑1 (MQ=255)
                                                                                  ggATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                 >  2:1348102/1‑100 (MQ=255)
                                                                                  ggATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                 <  1:32178/100‑1 (MQ=255)
                                                                                   atggttatcgtcgggTATTGGCGCTGCTTCGCAGACAGGGAGAACTTGCTGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGaa                <  2:1069191‑M2/85‑1 (MQ=255)
                                                                                   atggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGaa                <  2:606105‑M2/85‑1 (MQ=255)
                                                                                    tggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAt               >  2:1931543‑M2/15‑100 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAt               >  1:547173‑M2/14‑99 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATg              >  2:83675‑M2/14‑100 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATg              <  1:1673240‑M2/87‑1 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGAAAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAt               <  2:1205606‑M2/86‑1 (MQ=255)
                                                                                       aCGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgcg            <  2:445422/100‑1 (MQ=255)
                                                                                         atcgtcgggTTTGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCACACGTGTTTACCGGATCATGCGCCAGAATGCGCt          <  2:1573702‑M2/91‑1 (MQ=255)
                                                                                          tcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTg         <  1:877024‑M2/92‑1 (MQ=255)
                                                                                           cgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGt        >  1:1159812‑M2/8‑100 (MQ=255)
                                                                                            gtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGtt       <  2:891870‑M2/94‑1 (MQ=255)
                                                                                            gtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGtt       <  1:473737‑M2/94‑1 (MQ=255)
                                                                                            gtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGtt       >  2:675581‑M2/7‑100 (MQ=255)
                                                                                             tcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTg      <  1:1561710‑M2/95‑1 (MQ=255)
                                                                                              cgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGc     <  1:1891573‑M2/96‑1 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGCCAGGCAGAACTTGATGGTATGCCTGCGACCAATGCCAAACGTGTTTCCCGGATCATGCGCCAGAATGCGCTGTTGCt    <  1:1802003‑M2/97‑1 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    <  1:2099093‑M2/97‑1 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    <  1:1035640‑M2/97‑1 (MQ=255)
                                                                                               gCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    <  1:1175655/100‑1 (MQ=32)
                                                                                                  |                                                                                                  
AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG  >  NC_000913/1650745‑1650941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.