BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2837464	NA (NA)	5 (0.060)	4/162	NT	NA	intergenic (‑39/+114)	hypF/hydN	carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit
*	?	NC_000913	= 2837491	NA (NA)	5 (0.060)	4/162	NT	NA	noncoding (27/27 nt)	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 111 total aligned reads displayed.

GCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAG  >  NC_000913/2837392‑2837589

gCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGC                                                                                                    >  2:282559‑M2/1‑100 (MQ=255)

  aGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACCGCGTCGCATCCGGCag                                                                                                  <  1:2141085‑M2/100‑3 (MQ=255)

      ggACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcac                                                                                              >  1:1118235/1‑100 (MQ=255)

       gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                                             <  2:1280258/100‑1 (MQ=255)

       gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                                             >  1:517754/1‑100 (MQ=255)

        acacCGCAAGATGTGTTTTTTGCTATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                                             >  2:799819/1‑99 (MQ=255)

        acacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAg                                                                                            >  2:1402157/1‑100 (MQ=255)

        acacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAg                                                                                            >  2:799789/1‑100 (MQ=255)

         cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                           <  2:1923844/100‑1 (MQ=255)

          acCGCAAGATGTGTTTTTTGCCATTGAGTGATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                           <  1:1973053/99‑1 (MQ=255)

           ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                           <  1:2155164/98‑1 (MQ=255)

           ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                                                         >  2:1263529/1‑100 (MQ=255)

            cGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCg                                                                                        >  2:1718335/1‑100 (MQ=255)

             gCAAGATGTGTTTTTTTTTTTTTATTTATTCCCACCATCATGAATTACGTAACACGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGt                                                                                          >  2:483556/1‑97 (MQ=255)

                 gATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGATAGCGTCGCATCCGGCAGTCACAGGTCGGCGAt                                                                                   <  2:842669/100‑1 (MQ=255)

                 gATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGAt                                                                                   <  1:1974991/100‑1 (MQ=255)

                   tgtgTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAc                                                                                 <  2:343729/100‑1 (MQ=255)

                    gtgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAcc                                                                                <  1:1132397/100‑1 (MQ=255)

                     tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccg                                                                               >  1:1197556/1‑100 (MQ=255)

                              ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCg                                                                      >  1:1390877/1‑100 (MQ=255)

                               cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                                                     >  2:1496928/1‑100 (MQ=255)

                                  tGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCCTCCGGCAGTCACAGGTCGGCGATAACGCCCGCTCCGTAt                                                                   >  1:796302/1‑99 (MQ=255)

                                  tGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTAtt                                                                  >  2:873421/1‑100 (MQ=255)

                                    aGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCt                                                                >  2:748026/1‑100 (MQ=255)

                                     gTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATCCCGCCCGCTCCGTATTc                                                                 >  1:1944975/1‑98 (MQ=255)

                                     gTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTa                                                               >  1:1661696/1‑100 (MQ=255)

                                      ttATTCCCGCCATCATTAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACACGTCGGCGATACCGCCCGCTCCGTATTCTAc                                                              <  2:286961/100‑1 (MQ=255)

                                      ttATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTAc                                                              <  1:1754389/100‑1 (MQ=255)

                                       tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                                             >  1:1540480/1‑100 (MQ=255)

                                           cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                                                         <  1:1902634/100‑1 (MQ=255)

                                            ncGCCCTCATGAATTGCGTAACCCACCCTGCCGGACACGACAACGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                                                         >  2:510317/2‑99 (MQ=255)

                                            ccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCCTATTCTACGAata                                                         >  1:250768/1‑99 (MQ=255)

                                                 atcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCg                                                   >  1:1346122/1‑100 (MQ=255)

                                                   catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCggg                                                 <  1:2340041/100‑1 (MQ=255)

                                                   catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCggg                                                 <  1:245568/100‑1 (MQ=255)

                                                     tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGaa                                               >  2:1844551/1‑100 (MQ=255)

                                                     tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                                                >  1:435414/1‑99 (MQ=255)

                                                      gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                                              <  1:894089/100‑1 (MQ=255)

                                                        aTTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTc                                            <  2:2199455/100‑1 (MQ=255)

                                                          tGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCt                                          <  2:1611847/100‑1 (MQ=255)

                                                          tGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCt                                          <  2:1354079/100‑1 (MQ=255)

                                                          tGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCt                                          <  2:257676/100‑1 (MQ=255)

                                                           gCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCtt                                         >  2:1966704/1‑100 (MQ=255)

                                                            cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt                                        <  2:1881473/100‑1 (MQ=255)

                                                            cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt                                        <  2:1967170/100‑1 (MQ=255)

                                                            cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt                                        >  2:932437/1‑100 (MQ=255)

                                                             gTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg                                       <  2:1266073/100‑1 (MQ=255)

                                                               aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt                                     >  2:1134027/1‑100 (MQ=255)

                                                               aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt                                     >  2:1134105/1‑100 (MQ=255)

                                                               aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt                                     >  2:1893342/1‑100 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTCTTCTACGAATATTTCCGTGAATACCTTTAAt                                     >  1:1884434/1‑99 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    >  2:1777478/1‑100 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    >  2:1100751/1‑100 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    <  1:1218976/100‑1 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    >  1:1943651/1‑100 (MQ=255)

                                                                aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    <  2:252629/100‑1 (MQ=255)

                                                                 cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgt                                   <  1:894695‑M2/100‑66 (MQ=255)

                                                                  ccGCCCTGCCGGAGACGACATCGTCGCATCGGGCAGTCACAGGTCGGCGATACCGCCTGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                    <  2:2364165/98‑1 (MQ=255)

                                                                    gCCCTGCCGGACACGACAGCGTCGCAGCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggaaaaaaacacatcttgcggtatcca                                <  1:1456103‑M2/100‑69 (MQ=255)

                                                                      ccTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaac                              <  1:610154‑M2/100‑71 (MQ=255)

                                                                      ccTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaac                              <  1:1114954‑M2/100‑71 (MQ=255)

                                                                      ccTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGaa                              >  1:1675910/1‑100 (MQ=255)

                                                                      ccTGACGGACACGGCAGCGTCGCATCCGGCAGTCACATGTCGGCGATAGCGCCCGCTCGGTATTCTTCGATTATTTCCGGGAATTCATTTGATGCCAg                                <  2:781416/98‑1 (MQ=255)

                                                                      catgtcGGACCCGACAACGTCACCTCCGAGAGACACAGATCGGCGTTACAGCCTTCTGCGTATTCTATGAATATTTCTGGGAATTCCTTTGATGCCAg                                <  2:2139024/93‑1 (MQ=255)

                                                                       cTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact                             <  1:1710584‑M2/100‑72 (MQ=255)

                                                                         gCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACTAATATTTCCGGGAATTCCTTTGATGCCAGAACAg                           <  2:487267/100‑1 (MQ=255)

                                                                          ccGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGt                          >  2:702320/1‑100 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGttt                        <  1:2392823/100‑2 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  1:1595614/100‑1 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  1:2399054/100‑1 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  2:1346108/100‑1 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  1:1966726/100‑1 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  2:22890/100‑1 (MQ=255)

                                                                            ggACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                        <  2:1165849/100‑1 (MQ=255)

                                                                              acacGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTg                      >  1:562345/1‑100 (MQ=255)

                                                                               cacGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGt                     >  1:1224449/1‑100 (MQ=255)

                                                                                acGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTa                    <  2:1057804/100‑1 (MQ=255)

                                                                                 cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                   <  2:1185711/100‑1 (MQ=255)

                                                                                 cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                   >  2:120721/1‑100 (MQ=255)

                                                                                    cAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAt                >  2:1027043/1‑100 (MQ=255)

                                                                                       cGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATACCAGAACAGTTCTGTAAGAtttt             >  1:26476/1‑100 (MQ=255)

                                                                                       cGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATACCTTTGATGCCAGAACAGTTCTGTAAGAtttt             >  1:463608/1‑100 (MQ=255)

                                                                                         tCGCATCCGGCAGTCACAGGTCGGCGATACCGCGCGCTCCTTATTCTACGAATATTTCCGGGAATTACTTTGATGCCAGAACAGTTCTGTAAGAttttt            <  2:2141061/99‑1 (MQ=255)

                                                                                         tCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAATAGTTCTGTAAGATTTTTa           >  1:2206977/1‑100 (MQ=255)

                                                                                         tCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTa           <  2:87970/100‑1 (MQ=255)

                                                                                          cGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAg          <  1:2334070/100‑1 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGACTTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  2:1188624/1‑100 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         <  1:1718355/100‑1 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         <  1:1407344/100‑1 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  1:780708/1‑100 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  2:2270102/1‑100 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  2:1772977/1‑100 (MQ=255)

                                                                                           gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATGCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  1:1686513/1‑100 (MQ=255)

                                                                                            cATCCGGCAGTCACAGGTCGGCGATAACGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa         >  2:487299/1‑99 (MQ=255)

                                                                                             aTCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAAc       >  1:1606060/1‑100 (MQ=255)

                                                                                              tCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACa      >  2:1482455/1‑100 (MQ=255)

                                                                                              tCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACa      >  1:2357107/1‑100 (MQ=255)

                                                                                                cGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATc    >  2:918369/1‑100 (MQ=255)

                                                                                                 ggCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCa   >  2:422021/1‑100 (MQ=255)

                                                                                                  gCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAg  <  2:2371748/100‑1 (MQ=255)

GCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAG  >  NC_000913/2837392‑2837589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.