BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3336923 =	NA (NA)	4 (0.050)	3/166	NT	NA	noncoding (5/34 nt)	REP244 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP244 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3336953 =	NA (NA)	4 (0.050)	3/166	NT	NA	intergenic (‑150/+10)	ibaG/mlaB	acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component

Only 100 of 149 total aligned reads displayed.

TTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCC  >  NC_000913/3336854‑3337052

ttGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                                                                                                     <  2:1963269/100‑1 (MQ=255)

ttGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                                                                                                     <  2:1098424/100‑1 (MQ=255)

ttGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                                                                                                     <  1:1643360/100‑1 (MQ=255)

 tGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCt                                                                                                    >  2:926335/1‑100 (MQ=255)

 tGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCt                                                                                                    <  1:926346/100‑1 (MQ=255)

  cggcaaacctgcctgcaagtcgagccttgtctgatttatcagcgaggct‑‑TTTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCGTGaa                                                                                                 >  2:1393557‑M2/50‑100 (MQ=255)

   cgcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGATCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCGGa                                                                                                  >  2:541762/1‑100 (MQ=255)

   cgcTGGCATAAATAAGCAAAAAGCATCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCCGCCTGa                                                                                                  >  2:344727/1‑100 (MQ=255)

   cgcTGACATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGAAGGCAGGTTTGCCGGACAGTCGGTTAACGCCATATCCGGCCTg                                                                                                   >  2:271078/1‑99 (MQ=255)

    gcTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaa                                                                                                 <  2:1943156/100‑1 (MQ=255)

       ggCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaa                                                                                              >  2:523300/1‑100 (MQ=255)

        gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                                                                                             >  2:1418454/1‑100 (MQ=255)

        gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                                                                                             <  1:1399510/100‑1 (MQ=255)

        gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaaa                                                                                             >  1:955169/1‑100 (MQ=255)

         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                                                                            <  2:957811/100‑1 (MQ=255)

         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                                                                            >  2:119603/1‑100 (MQ=255)

         cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt                                                                                            <  1:1663918/100‑1 (MQ=255)

             cctgcaagtcgagccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTaa                                                                                        >  1:1589388‑M2/39‑100 (MQ=255)

             aataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTaa                                                                                        <  2:2334072/100‑1 (MQ=255)

             aataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTaa                                                                                        >  1:2208297/1‑100 (MQ=255)

             aataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTaa                                                                                        >  1:2093767/1‑100 (MQ=255)

              ataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAc                                                                                       <  1:268345/100‑1 (MQ=255)

              ataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAc                                                                                       <  1:652747/100‑1 (MQ=255)

              ataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCAGAAAAAATTTaa                                                                                        >  1:1348886/1‑99 (MQ=255)

               taaGCAAAAAGCCTCGCTGATAAATCAGACAATGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAc                                                                                       >  2:1518773/1‑99 (MQ=255)

                   cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc                                                                                  <  1:2025169/100‑1 (MQ=255)

                     aaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAg                                                                                >  1:1560543/1‑100 (MQ=255)

                       gagccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAAGAGGCAGaa                                                                              >  1:100453‑M2/29‑100 (MQ=255)

                        agccttgtctgatttatcagcgaggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAAc                                                                             >  2:906955‑M2/28‑100 (MQ=255)

                         gtataatttgcctgctgatgttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACa                                                                            >  1:1946525‑M2/75‑100 (MQ=255)

                          ccTCTCTGATAAATTAGACAAGGCTCGACTTGCAGGCACGTTTGCCAGACTGTCCGTTAATGCTATATCCGGCCTGAAAAAATTTAACGAg                                                                                    <  2:1125439/91‑1 (MQ=255)

                             cGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcag                                                                        <  2:2324954/100‑1 (MQ=255)

                                tGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATcagcag                                                                     >  1:2315121/1‑100 (MQ=255)

                                     aaTCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCaaa                                                                >  1:2169418/1‑100 (MQ=255)

                                     aaTCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCaaa                                                                >  1:1500927/1‑100 (MQ=255)

                                       tCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAAtt                                                              <  1:317484/100‑1 (MQ=255)

                                          gACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATtata                                                           >  1:308121/1‑100 (MQ=255)

                                           aCAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCAGGAATAAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATAc                                                          <  2:1985614/100‑1 (MQ=255)

                                           aCAAGGCACGACTTGCAGGGAGGTTTGCCGGACAGGCGGTTAACGCAATAAAAAAAAAAAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATAc                                                          <  2:646771/100‑1 (MQ=255)

                                            caatgctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCGTGAAAAAATTTATCGAGGCAGAACATCAGCAGGCAAATTATACa                                                         <  2:461218‑M2/93‑1 (MQ=255)

                                              aggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAt                                                       <  2:2372909‑M2/95‑1 (MQ=255)

                                              aggctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAAt                                                       >  2:1770486‑M2/6‑100 (MQ=255)

                                                 ctCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTc                                                    >  1:1969680‑M2/3‑100 (MQ=255)

                                                  tCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCg                                                   <  2:123117‑M2/99‑1 (MQ=255)

                                                  tCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAAAGAGGCAGCACATCAGCAGGCAAATTATACAATTTCg                                                   >  2:611579‑M2/2‑100 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                  <  1:1904622/100‑1 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                  <  1:1129951/100‑1 (MQ=255)

                                                   cGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                  <  1:2049791/100‑1 (MQ=255)

                                                    gACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGcc                                                 <  2:723454/100‑1 (MQ=255)

                                                    gACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGcc                                                 <  2:2064690/100‑1 (MQ=255)

                                                    gACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGc                                                  >  1:466805/1‑99 (MQ=255)

                                                       ttGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCa                                                <  1:165418/98‑1 (MQ=255)

                                                        tGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAggg                                             <  2:2072342/100‑1 (MQ=255)

                                                         gcaggcagGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAgg                                              >  2:874950/1‑98 (MQ=255)

                                                          caggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGta                                           >  2:1409528/1‑100 (MQ=255)

                                                          caggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGta                                           <  2:161841/100‑1 (MQ=255)

                                                           aggcaggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGtat                                          >  1:1782987/1‑100 (MQ=255)

                                                              caggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATaca                                       <  1:1241334/100‑1 (MQ=255)

                                                              caggTTTGCCGGACAGGCAGATAACGACATATCCGGACTGAAAAAATTTAACGAAGCAGAACATTACCAGGCGAATTATACAAATTCACCACGGTATaca                                       >  2:320146/1‑100 (MQ=255)

                                                               aggTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATacac                                      <  2:53949/100‑1 (MQ=255)

                                                                ggTTTGCCAGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACt                                     >  1:716340/1‑100 (MQ=255)

                                                                    tGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGt                                 <  1:920714/100‑1 (MQ=255)

                                                                     gccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                                >  1:279278‑M2/31‑100 (MQ=255)

                                                                     gCCGGACAGGCGGGTAACGCCATATCCGGCCTGAAACAATTTAACGAGGCAGAACATCAGCCGGCAAATTATACAATTTCGCCCGCGTATac                                        >  2:2040032/1‑92 (MQ=255)

                                                                     GCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                                >  2:1137837‑M1/1‑100 (MQ=255)

                                                                     GCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTc                                <  1:1723808‑M1/100‑1 (MQ=255)

                                                                      ccggatatggcgttaaccgcctgtccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCg                               >  1:448156‑M2/30‑100 (MQ=255)

                                                                      CCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCg                               >  2:913349‑M1/1‑100 (MQ=255)

                                                                       CGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGt                              <  1:1057359‑M1/100‑1 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                            >  2:607032‑M1/1‑100 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                            >  1:349153‑M1/1‑100 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                            >  2:2169393‑M1/1‑100 (MQ=255)

                                                                         GACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGC‑AGGGTATACACTTTGTCGTTTa                           <  1:1824520‑M1/100‑1 (MQ=255)

                                                                          ACAGGCGGTTAACGCGATATCCGGCCTGAAAAAATTTAACGATGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGttt                            >  2:86609‑M1/1‑99 (MQ=255)

                                                                          ACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTa                           >  2:1847834‑M1/1‑100 (MQ=255)

                                                                          ACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTa                           >  1:2029303‑M1/1‑100 (MQ=255)

                                                                          ACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTa                           >  2:238308‑M1/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGTCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                        >  2:2025732/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                        >  2:2224547/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccc                        >  1:2388115/1‑100 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAcc                         >  2:2314104/1‑99 (MQ=255)

                                                                             ggCGGTTAACGCCATATCCGGCCTAAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAcac                        >  2:1598875/1‑98 (MQ=255)

                                                                              gCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAcccc                       >  2:1076430/1‑100 (MQ=255)

                                                                               cGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccccc                      <  1:541765/100‑1 (MQ=255)

                                                                               cGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccccc                      <  1:2372884/100‑1 (MQ=255)

                                                                               cGGTTAACGCCATATCCGGACTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTAccccc                      <  2:1968439/100‑1 (MQ=255)

                                                                                ggTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCt                     >  1:1583751/1‑100 (MQ=255)

                                                                                  ttAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGa                   >  1:84220/1‑100 (MQ=255)

                                                                                    aaCGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTCTACACTTTGTCGTTTACCCCCTGAAg                 >  1:1200058/1‑100 (MQ=255)

                                                                                    aaCGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAg                 <  2:1853910/100‑1 (MQ=255)

                                                                                       gCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGt              >  2:1026220/1‑100 (MQ=255)

                                                                                           tatCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTcaca          >  2:1256934/1‑100 (MQ=255)

                                                                                           tatCCGGCCTAAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCG‑CAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTcac           <  2:1824499/98‑1 (MQ=255)

                                                                                            atCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAt         <  1:249257/100‑1 (MQ=255)

                                                                                             tccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAtt        >  1:1930716‑M2/7‑100 (MQ=255)

                                                                                             tccggaCTGAAAAAATATAACGAAGCAGAACATCAGCAGGCAAATTATACAATTTCACCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCATCACAt         >  2:1423104‑M2/7‑99 (MQ=255)

                                                                                              ccggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttg       >  1:358434‑M2/6‑100 (MQ=255)

                                                                                                ggcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttgtt     >  2:1513918‑M2/4‑100 (MQ=255)

                                                                                                 gcCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACAttgttg    >  2:2355491‑M2/3‑100 (MQ=255)

                                                                                                   cTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGcc  <  2:268862/100‑1 (MQ=255)

TTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAGAACATCAGCAGGCAAATTATACAATTTCGCCAGGGTATACACTTTGTCGTTTACCCCCTGAAGCGTCACATTGTTGCC  >  NC_000913/3336854‑3337052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.