Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,767,670 C→A 15.4% intergenic (+315/‑40) rnlB → / → yfjP CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,767,6700CA15.4% 280.1 / 40.2 104intergenic (+315/‑40)rnlB/yfjPCP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein
Reads supporting (aligned to +/- strand):  ref base C (46/42);  new base A (7/9);  total (53/51)
Fisher's exact test for biased strand distribution p-value = 5.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.70e-01

Only 100 of 106 total aligned reads displayed.

GTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACC  >  NC_000913/2767571‑2767762
                                                                                                   |                                                                                            
gTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTcgc                                                                                              >  1:2124731/1‑100 (MQ=255)
gTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTcgc                                                                                              <  2:2353633/100‑1 (MQ=255)
   cTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGt                                                                                           <  1:584777/100‑1 (MQ=255)
      tgAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCt                                                                                        >  1:1943535/1‑100 (MQ=255)
        aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGACCGGCAGAACCGCGAGGTTCTGc                                                                                      <  1:1803352/100‑1 (MQ=255)
        aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGATTCTGc                                                                                      >  1:749291/1‑100 (MQ=255)
        aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGc                                                                                      <  1:387405/100‑1 (MQ=255)
        aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGc                                                                                      <  1:1937912/100‑1 (MQ=255)
         gTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATATATCTAATTCTCCTGAATAATCCGATAAACGGCAGAACCTCGCGGTTCTGcc                                                                                     >  2:798704/1‑100 (MQ=255)
          ttCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCg                                                                                    <  2:1133227/100‑1 (MQ=255)
          ttCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCACGGTTCTGCCg                                                                                    >  1:2268648/1‑100 (MQ=255)
          ttCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGAGATCATTCTCCTGAACAATCCGAGGAACGGCAGAACCGCGAGGTTCTGCCg                                                                                    <  1:15893/100‑1 (MQ=39)
           tCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCg                                                                                    >  1:2044862/1‑99 (MQ=255)
           tCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGt                                                                                   <  1:722874/100‑1 (MQ=255)
           tCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGt                                                                                   >  1:2266933/1‑100 (MQ=255)
           tCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGt                                                                                   <  1:565294/100‑1 (MQ=255)
            cttaaaTATTATGCAATCTATGTGAATTAAAAACATCTTCAGATAGATATCCTTCTCCTGAACAATCCGATGAACGGTAGAACCGCGAGGTTCTGCCg                                                                                    <  2:2325932/95‑1 (MQ=255)
            cAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGtt                                                                                  >  2:1351956/1‑100 (MQ=255)
              gAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGtttt                                                                                >  2:805115/1‑100 (MQ=255)
              gAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGACGTTCTGCCGttca                                                                                <  1:1611503/100‑3 (MQ=39)
              ctaaGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGttca                                                                                <  1:264893/98‑3 (MQ=38)
                aaGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGttcaag                                                                              >  2:264890/1‑96 (MQ=38)
                aaGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGACAGAACCTCGCGGTTCTGCCGTTTTTg                                                                              >  1:1582054/1‑100 (MQ=255)
                  gATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGtt                                                                            <  2:265941/100‑1 (MQ=255)
                    ttCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGTCGTTTTTGtttt                                                                          <  1:1579305/100‑1 (MQ=255)
                    ttCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGtttt                                                                          <  1:2136337/100‑1 (MQ=255)
                     tCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTa                                                                         <  1:1628092/100‑1 (MQ=255)
                      cTGCAATCTATGTGCAATAAAAAAATATTCAGATAGATATCATTCTCCTGAAAACTCCGATGAACGGCAGAACCTAGCGTTTCTGCCGTTTTTGTTTTa                                                                         >  2:326970/1‑99 (MQ=255)
                         cAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGCACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACtt                                                                      >  1:2049498/1‑99 (MQ=255)
                         cAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACttt                                                                     <  2:1962544/100‑1 (MQ=255)
                          aaTCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACtttt                                                                    >  1:2156711/1‑100 (MQ=255)
                          aaTCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCAGTTTTTGTTTTACtttt                                                                    >  2:1691621/1‑100 (MQ=255)
                           aTCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTc                                                                   <  1:603423/100‑1 (MQ=255)
                            tCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATTAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCa                                                                  <  1:1180294/100‑1 (MQ=255)
                               aTGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCagag                                                               >  2:1886520/1‑100 (MQ=255)
                                tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAGCCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg                                                              >  1:1506381/1‑100 (MQ=255)
                                tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGttttttttttttttttttgatg                                                              >  2:236725/1‑94 (MQ=38)
                                tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg                                                              >  2:2346230/1‑100 (MQ=255)
                                tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg                                                              <  2:1363045/100‑1 (MQ=255)
                                tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTAAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg                                                              <  1:2392912/100‑1 (MQ=255)
                                  tgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgaggag                                                            >  1:767014/1‑100 (MQ=255)
                                  tgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgaggag                                                            >  2:721885/1‑100 (MQ=255)
                                   gCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgaggag                                                            >  1:1418582/1‑99 (MQ=255)
                                    cATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAgt                                                           >  2:1283219/1‑99 (MQ=255)
                                    cATTGAAAAAATATTCAGATAGATATCATTCTCCTGAACAATACGATGAACGGCAGAACCTCGCGGTTATGCCGTTTTTGTTTTACTTTTCAGAGGAgtg                                                          >  2:1792167/1‑100 (MQ=255)
                                     aTTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCTTTTGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAgtgg                                                         <  2:558870/100‑1 (MQ=255)
                                     aTTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAgtg                                                          <  1:132284/99‑1 (MQ=255)
                                        gAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGtga                                                      >  1:1823874/1‑100 (MQ=255)
                                         aaaaaaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTTTTTTATTTTTCAGAGGAgtggtg                                                       >  2:1455406/1‑98 (MQ=255)
                                         aaaaaaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGtga                                                      <  2:338294/99‑1 (MQ=255)
                                         aaaaaaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTCTGTTTTACTTTTCAGAGGAGTGGtgat                                                     >  1:2387198/1‑100 (MQ=255)
                                          aaaaaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGTGTGGtgctg                                                    >  1:166452/1‑100 (MQ=255)
                                             aaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGaaa                                                 <  1:1845345/100‑1 (MQ=255)
                                                cTTCAGCTAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCAGTTCTGACGTTTCTGTTTTAATTATCAGAGGAGCGGTGAAGcaaaa                                               >  2:1907357/1‑99 (MQ=255)
                                                   cAGATAGATATCATTCTCCTTAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTTAGAGGAGTGGTGATGAAAAAtttt                                           <  2:1359283/100‑1 (MQ=255)
                                                   cAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAtttt                                           <  2:1960630/100‑1 (MQ=255)
                                                     gatagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGa                                         <  1:2155589/100‑1 (MQ=255)
                                                     gatagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGa                                         >  2:1669314/1‑100 (MQ=255)
                                                     gatagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGa                                         >  2:2307158/1‑100 (MQ=255)
                                                      atagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGaa                                        <  1:1332301/100‑1 (MQ=255)
                                                      atagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGaa                                        >  2:1196228/1‑100 (MQ=255)
                                                      agatatatCATTCGCCTTAACAATCCGATGAACTGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGCAAAATTTTgc                                         <  2:439071/95‑2 (MQ=255)
                                                        agataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGt                                      <  1:1569386/100‑1 (MQ=255)
                                                         gataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGtt                                     >  2:1270876/1‑100 (MQ=255)
                                                           tatCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCt                                   <  2:2266907/100‑1 (MQ=255)
                                                             tCATTGTCCTGAACAATCCGATGAACGGCATAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCATAGGAGTGGTGATGAAAAATTTTGAGGTTCTGc                                 <  2:1061726/100‑1 (MQ=255)
                                                             tCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGc                                 >  1:1723333/1‑100 (MQ=255)
                                                              cATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCa                                <  2:2084131/100‑1 (MQ=255)
                                                               aTTCTCCTGAACAATCCGATGAACGGCAGAATCTCGCGCTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAg                               <  2:928786/100‑1 (MQ=255)
                                                               aTTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAg                               >  1:1950023/1‑100 (MQ=255)
                                                                  ctcCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCa                            >  2:1921855/1‑100 (MQ=255)
                                                                  ctcCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCa                            >  2:873670/1‑100 (MQ=255)
                                                                     cTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTa                         >  1:1024840/1‑100 (MQ=255)
                                                                     cTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTa                         >  1:1025009/1‑100 (MQ=255)
                                                                     cTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTa                         >  1:484145/1‑100 (MQ=255)
                                                                       gAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACa                       >  2:1067267/1‑100 (MQ=255)
                                                                       gAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACa                       >  1:1164188/1‑100 (MQ=255)
                                                                       gAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTATGCAGCCACTaaa                       >  1:778762/1‑98 (MQ=255)
                                                                       gAAAAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTAc                        <  2:2246078/99‑1 (MQ=255)
                                                                        aaCAATCCGATGAACGGCAGAACCTCGCGGTTCTGCTGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAg                      <  1:1680654/100‑1 (MQ=255)
                                                                         aCAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGa                     <  2:484142/100‑1 (MQ=255)
                                                                          cAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGaa                    <  2:2050507/100‑1 (MQ=255)
                                                                           cttccgatctaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAAc                   <  2:1434546/90‑1 (MQ=38)
                                                                            aTCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACt                  >  2:890853/1‑100 (MQ=255)
                                                                             tCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTc                 <  1:696122/100‑1 (MQ=255)
                                                                               cGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTccc               >  1:19919/1‑100 (MQ=255)
                                                                               cGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTccc               <  2:1418567/100‑1 (MQ=255)
                                                                                gATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCt              <  2:473143/100‑1 (MQ=255)
                                                                                    aaCGGCAGAACCTCGCGGTTCTTCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCTGCCACTACAGAACTCCCTTTcc          <  2:1831872/100‑1 (MQ=255)
                                                                                    aaCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTcc          <  2:1943513/100‑1 (MQ=255)
                                                                                    aaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTcc          >  1:1342622/1‑100 (MQ=255)
                                                                                     aCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCg         >  1:1586738/1‑100 (MQ=255)
                                                                                     aCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAAcagatcggaag         >  1:1434561/1‑90 (MQ=38)
                                                                                     aCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCg         >  2:922771/1‑100 (MQ=255)
                                                                                     aCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCg         >  1:1101514/1‑100 (MQ=255)
                                                                                      cGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAACATTTTGAAATTCTGCAGCCACTACAGAACTCCCTTTcc          >  2:522889/1‑98 (MQ=38)
                                                                                        gCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc      >  1:521810/1‑100 (MQ=255)
                                                                                           gAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCTGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTAc   >  1:1074501/1‑100 (MQ=255)
                                                                                            aaCCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTAcc  <  1:2321926/100‑1 (MQ=255)
                                                                                            aaCCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTAcc  <  1:1364938/100‑1 (MQ=255)
                                                                                                   |                                                                                            
GTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACC  >  NC_000913/2767571‑2767762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: