| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,782,883 | G→A | 59.8% | intergenic (‑157/+182) | ypjA ← / ← pinH | adhesin‑like autotransporter/pseudogene, invertase resolvase family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,782,883 | 0 | G | A | 59.8% | 54.1 / 117.4 | 102 | intergenic (‑157/+182) | ypjA/pinH | adhesin‑like autotransporter/pseudogene, invertase resolvase family |
| Reads supporting (aligned to +/- strand): ref base G (24/17); new base A (34/27); total (58/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCT > NC_000913/2782784‑2782982 | tgcAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatg > 2:2228954/1‑100 (MQ=255)tgcAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatg > 1:358203/1‑100 (MQ=255) gcAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatga > 1:984576/1‑100 (MQ=255) cAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAaataat > 2:1354827/1‑100 (MQ=255) aaCATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAatgat < 1:1986310/99‑1 (MQ=255) aaCATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAataatg > 2:1195460/1‑100 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat < 1:2247828/100‑1 (MQ=255) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATgatgat < 2:1039370/100‑1 (MQ=40) cATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATaatgat < 2:738257/100‑1 (MQ=255) aTCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGata < 1:1544342/100‑1 (MQ=255) tCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGatat < 2:2037958/100‑1 (MQ=255) aGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTc < 2:12631/100‑1 (MQ=255) gcgcacaGGCACCAGACCAGGGGAATCATACTGAAGAGACAGCGCAAGTGTATTGTGTTCAACGCACATCAAAGAAATCATGATGAAATAATGATAttt > 2:2076860/4‑98 (MQ=14) gCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCGCCGCTCATCAAAGACATCATGATGAAATAATGATATTcc > 1:1520309/1‑100 (MQ=255) gCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTcc > 2:1735339/1‑100 (MQ=255) ccACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGc < 2:1825435/100‑1 (MQ=255) cacaGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCa > 1:4184/1‑100 (MQ=255) caGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTTTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATa < 2:1053186/100‑1 (MQ=255) aGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATaa < 2:2349318/100‑1 (MQ=255) ggCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAg > 1:2403967/1‑100 (MQ=255) cACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGaa > 2:1836072/1‑100 (MQ=255) ccagaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATg < 2:1087882/100‑1 (MQ=255) ccagaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATg > 2:1240559/1‑100 (MQ=255) cagaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGa < 2:838334/100‑1 (MQ=255) agaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAg < 1:1118940/100‑1 (MQ=255) gaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAgg < 1:276331/100‑1 (MQ=255) gaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAgg < 2:2288205/100‑1 (MQ=255) gaccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAgg > 1:459498/1‑100 (MQ=255) accagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGc > 1:1388506/1‑100 (MQ=255) ccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGc < 2:1046019/99‑1 (MQ=255) ccagGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCa > 2:2203997/1‑100 (MQ=255) ggggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAttt < 1:1240572/100‑1 (MQ=255) ggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAttttt < 1:713514/100‑1 (MQ=255) ggATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCAttttt < 2:1718342/100‑1 (MQ=255) gATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCAtttttt < 2:1343352/100‑1 (MQ=255) aTTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTa < 2:68925/100‑1 (MQ=255) ttCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTaa < 2:2130706/100‑1 (MQ=255) ttCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTaa < 2:2149412/100‑1 (MQ=255) cATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc > 2:526182/1‑100 (MQ=255) cATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc > 1:424595/1‑100 (MQ=255) aTCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAAc > 1:399342/1‑99 (MQ=255) tCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGc > 2:2196595/1‑100 (MQ=255) tCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGc > 1:834850/1‑100 (MQ=255) tGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGt < 1:1817403/100‑1 (MQ=255) gAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTg > 2:296922/1‑100 (MQ=255) gaCAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTg > 1:1574505/1‑100 (MQ=255) aCAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATGTTTTAAACGCAGTGCGCTg < 2:535501/99‑1 (MQ=255) cAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGaa > 1:364355/1‑100 (MQ=255) aGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGTCATTTTTTAAACGCAGTGCGCTGAAg < 1:1457746/100‑1 (MQ=255) aGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAg < 1:306378/100‑1 (MQ=255) aGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAg < 1:958288/100‑1 (MQ=255) aGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAg < 1:2316452/100‑1 (MQ=255) gtgtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGtt < 1:2057447/100‑1 (MQ=255) tgtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTg < 1:686069/100‑1 (MQ=255) gtATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTgg < 2:834841/100‑1 (MQ=255) aTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGAt > 1:2157590/1‑100 (MQ=255) aTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGAt > 1:1488567/1‑100 (MQ=255) aTTGTGTTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGAt > 2:2369407/1‑100 (MQ=255) ttGTGTTCACCGCTAATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGCTTGGATa < 1:1259805/100‑1 (MQ=255) gtgtTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaa > 2:1023535/1‑100 (MQ=255) gtTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaaaa > 1:2079888/1‑100 (MQ=255) gtTCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATaaaaa < 2:459495/100‑1 (MQ=255) ttCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAATGCAGTGCTCTGAAGTGTGGTTGGATaaa > 2:626455/1‑97 (MQ=255) tCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAg > 2:761997/1‑100 (MQ=255) tCACCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCA‑TTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGt > 1:623242/1‑100 (MQ=255) cACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGt > 1:1311238/1‑100 (MQ=255) aCCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTc < 2:1557760/100‑1 (MQ=255) aCCGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTc < 2:1657220/100‑1 (MQ=255) ccGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCa > 2:2385106/1‑100 (MQ=255) ccGCTCATCAAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCACTGAAGTGTGGTTGGATAAAAAAGTc < 1:2251967/99‑1 (MQ=255) cGCTCATCAAAGACATCATGATGAAATAATGATATTACGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCaa > 1:1687250/1‑100 (MQ=255) cTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATc < 1:541628/100‑1 (MQ=255) catcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 1:2245616/1‑100 (MQ=255) catcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 1:1493656/1‑100 (MQ=255) catcaAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa < 1:1257464/100‑1 (MQ=255) catcaAAGACATAATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 1:1571222/1‑100 (MQ=255) catcaAACACACCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTACGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCa > 2:1257451/1‑100 (MQ=255) tcaAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCAtt > 1:1323134/1‑100 (MQ=255) caAAGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTc > 2:1736546/1‑100 (MQ=255) aaaGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCa < 1:1487955/100‑1 (MQ=255) aaaGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCa > 2:1105840/1‑100 (MQ=255) aaaGACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCa < 2:1787908/100‑1 (MQ=255) aGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAgg > 1:1378137/1‑100 (MQ=255) gACATCATGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGa < 1:218317/100‑1 (MQ=255) catcatGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGaaa < 1:508450/100‑1 (MQ=255) tcatGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATa > 2:695048/1‑100 (MQ=255) catGATGAAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATAc > 1:2398455/1‑100 (MQ=255) catGATGAAATAATGATATTCCGAATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATAc > 2:1353755/1‑100 (MQ=255) tgatgaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACgg > 2:849701/1‑100 (MQ=255) tgatgaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGAAAATACgg > 1:2016306/1‑100 (MQ=255) tgatgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTTAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATAc > 1:179181/1‑98 (MQ=255) tgatgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACgg > 1:1056873/1‑100 (MQ=255) gatgaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCAATTCAGGAAATACggg > 1:1906909/1‑100 (MQ=255) atgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGc > 1:358769/1‑100 (MQ=255) tgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCg > 1:618641/1‑100 (MQ=255) tgaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCg < 2:2168110/100‑1 (MQ=255) gaAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGt < 1:493292/100‑1 (MQ=255) gaAATAATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTAAGGACATATGGGCGt > 2:1998486/1‑100 (MQ=21) aaaTGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTa > 1:999848/1‑100 (MQ=255) gatgatATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTAttct < 2:1311224/100‑1 (MQ=255) | TGCAACATCAGCCCACAGGCACCAGACCAGGGGATTCATCCTGAAGAGACAGCGCAAGTGTATTGTGTTCACCGCTCATCAAAGACATCATGATGAAATGATGATATTCCGCATAAGAATGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCT > NC_000913/2782784‑2782982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |