| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,098,512 | C→A | 18.2% | R259R (CGC→CGA) | rhaS → | transcriptional activator of rhaBAD and rhaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,098,512 | 0 | C | A | 18.2% | 317.7 / 48.6 | 126 | R259R (CGC→CGA) | rhaS | transcriptional activator of rhaBAD and rhaT |
| Reads supporting (aligned to +/- strand): ref base C (57/44); new base A (11/12); total (69/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GAAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGAA > NC_000913/4098413‑4098611 | gaAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGc > 2:1738519/1‑100 (MQ=255) aaGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGATACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCg < 1:2288305/100‑1 (MQ=255) gCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCgag > 1:2191121/1‑100 (MQ=255) gCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCgag < 1:1788778/100‑1 (MQ=255) gCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCgag > 1:382497/1‑100 (MQ=255) gCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGCGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCgag > 2:1832096/1‑100 (MQ=255) cccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACgaga > 1:1144226/1‑100 (MQ=255) ccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGagag < 1:1738540/100‑1 (MQ=255) gACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGtt < 2:1887422/100‑1 (MQ=255) tCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAAc > 1:1502742/1‑100 (MQ=255) tCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAAc < 1:1665844/100‑1 (MQ=255) tGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTg < 1:1300193/100‑1 (MQ=255) gctgaatccacagcgataggcgatgtcagtaacgctggcctcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAAATg > 1:118582‑M2/50‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTgg < 2:724367/100‑1 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTgg < 2:1056376/100‑1 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTgg > 1:2267562/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTgg > 2:61994/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTgg < 1:2170641/100‑1 (MQ=255) tACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTc > 1:1914166/1‑100 (MQ=255) tACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGCTTAACTGGTc > 2:2220572/1‑100 (MQ=255) tACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTc > 1:1677684/1‑100 (MQ=255) aCGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCa > 2:1722933/1‑100 (MQ=255) cGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAc > 1:2223595/1‑100 (MQ=255) cGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCAc < 2:2290242/100‑1 (MQ=255) cGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCAc < 2:1144215/100‑1 (MQ=255) atccacagcgataggcgatgtcagtaacgctggcctcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCAc > 1:417366‑M2/45‑100 (MQ=255) gCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAcc > 2:1004339/1‑100 (MQ=255) ccacagcgataggcgatgtcagtaacgctggcctcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGACAGCTTAACTGGTCAcc > 2:216799‑M2/43‑99 (MQ=255) CCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcg < 2:387636‑M1/100‑1 (MQ=255) CACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGAAAGTAACCACTTTTCTACGCTTTTGCGCCGAGAGTGTAACTGGTCACcg < 2:1327255‑M1/99‑1 (MQ=255) acagcgataggcgatgtcagtaacgctggcctcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcgcg > 1:148601‑M2/41‑100 (MQ=255) ACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcgcg > 1:1132374‑M1/1‑100 (MQ=255) caGCGAGGCCAGCGTTACTTACATCGCCTATCGCTGTGTATGCAGCGACATTAACCACTTTTCGACGCTTTTTCGACTATAGTTTAACTGGTCACCGCGt < 2:225569/100‑1 (MQ=255) AGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTg > 2:898744‑M1/1‑100 (MQ=255) GCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGa > 2:1761145‑M1/1‑100 (MQ=255) GCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGa < 1:1662203‑M1/100‑1 (MQ=255) GCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGa > 1:498529‑M1/1‑100 (MQ=255) CGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGat > 1:2026869‑M1/1‑100 (MQ=255) GAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGata < 1:666584‑M1/100‑1 (MQ=255) GAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGata < 2:1903763‑M1/100‑1 (MQ=255) ggCCAGCGTTACTGACATCGCCTATCGCTGTTGATTCTGCGACAGTAACCACTTTTCTACGCTTTTTCGGCGAGAGTTTAACTGGGCACCGCGTg < 2:958276/95‑1 (MQ=255) gTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAgg < 1:2042388/100‑1 (MQ=255) gTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAg < 2:2102985/99‑1 (MQ=255) gTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAAAC‑CTTTTTCACGCTTTTTCGGAGAGAGGTTAAATTGTCAACGCCTGATAtttcccaagg > 2:1305222/1‑92 (MQ=255) tACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGa < 2:143130/100‑1 (MQ=255) tGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACgg < 1:950914/100‑1 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTAGTCACCGAGAGATATTCACCAGGGAAggg > 1:5839/1‑100 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACggg > 1:1751653/1‑100 (MQ=255) cATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGAt > 2:1444559/1‑100 (MQ=255) cATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGAt > 2:1620398/1‑100 (MQ=255) aTCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGAt > 2:662080/1‑99 (MQ=255) tATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGGTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTc > 1:1924559/1‑100 (MQ=255) aTCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGGGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCt > 1:2404777/1‑100 (MQ=255) tcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg < 2:77312‑M2/91‑1 (MQ=255) tcgctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg < 2:862213‑M2/91‑1 (MQ=255) gctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa < 2:599042‑M2/93‑1 (MQ=255) gctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCCCGTGATATTCGCCACGGACGGGATGGCATTCTGCa > 1:474273‑M2/8‑100 (MQ=255) ctgtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCaa > 1:1900946‑M2/7‑100 (MQ=255) gtggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTGTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATa > 1:2036679‑M2/5‑100 (MQ=255) ggATTCAGCGACAGTAACCACTTTTCGACGCTTTGTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCTAGTTACGGGATGGCTTTCGGCAATAAc < 2:971873‑M2/98‑1 (MQ=255) gATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACg < 1:278743‑M2/99‑1 (MQ=255) aTTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgc > 1:638565/1‑100 (MQ=255) ttCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgcg < 2:2226178/100‑1 (MQ=255) cAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa > 2:1525184/1‑100 (MQ=255) cAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa > 2:1784827/1‑100 (MQ=255) aGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAt > 1:2220873/1‑100 (MQ=255) aGCGACAGTAACCACTTTTCGAAACTTATTCGCCGAGAGTTTAACTGGTCACCGAGTGATATTCGCCAGGGACGGGATGGCTATCTGTAATAAAGCGa > 2:370776/1‑98 (MQ=255) gCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtc < 2:1829180/100‑1 (MQ=255) cGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtct > 2:647427/1‑100 (MQ=255) cGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtct > 2:2337406/1‑100 (MQ=255) aCAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttc < 1:494683/100‑1 (MQ=255) aCAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttc < 2:1858344/100‑1 (MQ=255) cAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtattct > 1:2162430/1‑100 (MQ=255) aGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTtctc < 2:726783/100‑1 (MQ=255) aGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTtctc < 2:968398/100‑1 (MQ=255) gTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCa > 1:113182/1‑100 (MQ=255) gTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCa > 2:1744792/1‑100 (MQ=255) gTAACCACTTTTAGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTTGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtctt > 2:2183060/1‑96 (MQ=255) aCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACg < 1:358151/100‑1 (MQ=255) ccACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACg < 2:1825853/99‑1 (MQ=255) cccTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGACACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAAc > 1:1625794/3‑97 (MQ=255) cACTTTTCGACGCTTTTTCGCTGAGAGTGTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTa < 2:2276960/100‑1 (MQ=255) cTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTAtt > 1:1285896/1‑100 (MQ=255) tttCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTg < 1:690678/100‑1 (MQ=255) gACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACg < 2:2384261/100‑1 (MQ=255) gACGCTTTTTCGCAGAGAGTTTAACTGGTCACCGCGTTATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACg < 2:1172299/100‑1 (MQ=255) cGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc < 1:1722954/100‑1 (MQ=255) cGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc > 1:1267275/1‑100 (MQ=255) cGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc < 2:1667040/100‑1 (MQ=255) cGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc < 2:1225001/100‑1 (MQ=255) gCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCa < 2:2188359/100‑1 (MQ=255) cTTTTTTGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCa < 1:57170/99‑1 (MQ=255) cTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCat < 2:1373622/100‑1 (MQ=255) ttttCGCCGAGAGTTTAACTCATCACCACGTTCTATTCGCCAGGAACAGGATGGCATTCTACAATAACGCGAATCTTCTCAAAGTATTTGTACGCCatat > 2:1756874/1‑100 (MQ=255) cGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCg < 2:1260676/100‑1 (MQ=255) gCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGa > 1:75918/1‑100 (MQ=255) gCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGa > 2:1219872/1‑100 (MQ=255) gCCGAGAGTTTAACTGGTCACCACGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGa > 2:1389168/1‑100 (MQ=255) ccGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATTCCGCGAATCTTCTCAACGTATTTGTACGCCATATTGc < 2:2389935/97‑1 (MQ=255) ccGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGCACGCCATATTGCGaa > 1:2364968/1‑100 (MQ=255) | GAAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGAA > NC_000913/4098413‑4098611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |