| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,140,718 | T→A | 15.6% | I502F (ATC→TTC) | frwA ← | putative PTS enzyme: Hpr, enzyme I and II components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,140,718 | 0 | T | A | 15.6% | 385.3 / 58.7 | 155 | I502F (ATC→TTC) | frwA | putative PTS enzyme: Hpr, enzyme I and II components |
| Reads supporting (aligned to +/- strand): ref base T (66/64); new base A (11/13); total (78/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.17e-01 | |||||||||||
Only 100 of 157 total aligned reads displayed.
CTCATCAAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCACGGCGCGATA > NC_000913/4140620‑4140817 | ctcATCAAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATc < 2:1603886/100‑1 (MQ=255) tcatcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCa < 2:828762/100‑1 (MQ=255) tcatcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCa < 1:163731/100‑1 (MQ=255) catcaAACGGAATGTGTTCGTTACTTAGTTTCTGTTTTGCTTCCTCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAAGAGATCATCGGGAACa < 2:1999302/99‑1 (MQ=255) catcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCAt > 1:1139721/1‑100 (MQ=255) catcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACAt > 2:993632/1‑100 (MQ=255) atcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAtaa > 1:215022/1‑96 (MQ=255) atcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATg < 1:2404622/100‑1 (MQ=255) atcaAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATg < 1:1385342/100‑1 (MQ=255) tcaAACGGTATGTGTTCGTTACGTAGTTTCTGTTTGGCTTCCGCCAGTTTTTCTTTCCCCCATAATATCTCTTCCATTGATGAGATCATCGGGATCATGa < 2:571825/100‑1 (MQ=255) aaaCGGAATGTGTTCGTAACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTACTTTCACCCATAAGATCTCTTCCATTGAGGAGCTCATCGGGATCATgct > 2:446164/1‑97 (MQ=255) aCGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGAtttt < 1:776322/100‑1 (MQ=255) cGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTc < 2:1759396/100‑1 (MQ=255) actgtgTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAgg < 1:2282454/98‑1 (MQ=255) aTGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGc < 1:1801895/100‑1 (MQ=255) tgtgTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCt > 1:1982130/1‑100 (MQ=255) gtgtTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTg > 2:2398117/1‑100 (MQ=255) tCGTTACGTAGTTTCTGGTTGGCTGCCGCCAGCTTTGCTTTAACCCATAAGATCTCTTCCATTGAGGAGTTCATCTTGATCATGATTTTCAGGCTGCCg < 2:745626/99‑1 (MQ=255) cGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTg > 1:2161063/1‑100 (MQ=255) ttACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTg < 1:940396/98‑1 (MQ=255) aCGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTTTTTTTTTTTTTAGCAGTATTCGATTGAGGAGATCATCGAGATCCTGATTTTCAGGCTGc > 2:495260/1‑92 (MQ=255) aCGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGc > 1:622835/1‑99 (MQ=255) aCGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCg < 1:1115638/100‑1 (MQ=255) cGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATTATCGGTAACATGATTTTCAGGCTGCCGTGAGCg > 2:760677/1‑99 (MQ=255) tAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAg > 1:1018637/1‑100 (MQ=255) tAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAg < 1:1271527/100‑1 (MQ=255) gTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGgc < 2:672566/100‑1 (MQ=255) tGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGgcgc > 2:1190228/1‑100 (MQ=255) cTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCgg > 1:1560814/1‑100 (MQ=255) cTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGATGCGCgg > 1:1861950/1‑100 (MQ=255) cTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCgg > 2:752855/1‑100 (MQ=255) tGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCgga < 2:1147864/100‑1 (MQ=255) tGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCgga < 1:747592/100‑1 (MQ=255) tGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCgga < 1:1017278/100‑1 (MQ=255) gTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCggag < 1:394464/100‑1 (MQ=255) gTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCggag < 1:718518/100‑1 (MQ=255) tttGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCggag < 1:724298/99‑1 (MQ=255) ttgCTTCCGCCAGTTTTTCTTTAACCCATAAGATCTCTTCCATTCAGGAGATCATCGGGATCATGATTTTCAGGCTGCGGTGCGGGGAGAAGCGGAGGAt > 2:1884690/3‑100 (MQ=255) ggCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATc > 1:2188846/1‑100 (MQ=255) ggCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATc < 2:1937840/100‑1 (MQ=255) ggCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCATGCTTCCTTGAGCGGAGGCGCGGAGGATc < 2:241446/100‑1 (MQ=255) cTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCAATTGAGGAGATCATCGGGATCATGATTTTCAGTCTGTCGTGAGCGGAGGCGCGGAGGATCGa > 2:39573/1‑100 (MQ=255) cTTCCGACAGTTTTTCATTAAACAATAAAATCTATTCCATTGAGTAACTCATCGGGCTCATGATTTTCATACTGCAGTGGGGGGAGGCGCGGAGGATCg > 2:791948/1‑99 (MQ=255) ttCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGAc < 2:980135/100‑1 (MQ=255) ttCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGAc < 1:873502/100‑1 (MQ=255) tCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGAcc < 1:2080680/100‑1 (MQ=255) tCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGAcc < 1:555215/100‑1 (MQ=255) tCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGAcc < 2:1991320/100‑1 (MQ=255) ccGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCg < 1:2077704/100‑1 (MQ=255) cGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGt < 2:2364986/100‑1 (MQ=255) cGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGt > 1:1175070/1‑100 (MQ=255) ccAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAg < 2:927872/100‑1 (MQ=255) aGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGTGGAGGATCGACCGTAGc < 2:323872/99‑1 (MQ=255) gTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTg < 2:551945/100‑1 (MQ=255) gTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTg > 2:1528168/1‑100 (MQ=255) tttctttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGt < 2:2232873/100‑1 (MQ=255) tctttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTgg > 1:754676/1‑100 (MQ=255) tctttcACCCATAAGATCTCTTCCAGTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTgg < 2:66708/100‑1 (MQ=255) ctttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGt > 2:1698813/1‑100 (MQ=255) ctttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGt > 2:1313216/1‑100 (MQ=255) tttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTa > 1:2402871/1‑100 (MQ=255) tttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTa > 2:476729/1‑100 (MQ=255) tttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTCCGTGGTa > 1:681476/1‑100 (MQ=255) tttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTa < 1:1473852/100‑1 (MQ=255) ttcACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTaa < 2:335296/100‑1 (MQ=255) cACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAaac > 1:490299/1‑100 (MQ=255) aCCCATAAGATCTCTTCCATTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAaaca < 2:221747/100‑1 (MQ=255) cccATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCCGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAaacaa > 2:463579/1‑100 (MQ=255) ccATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAaacaac < 1:476732/100‑1 (MQ=255) cATAAGATCTCTTCCATTAAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGAGAAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAacg > 2:399156/1‑100 (MQ=255) aGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGAcgc < 1:1209596/100‑1 (MQ=255) aGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGAcgc > 2:1007184/1‑100 (MQ=255) aTCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGt < 1:1854269/100‑1 (MQ=255) ctctTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTAc > 1:963888/1‑100 (MQ=255) ctctTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTAc < 1:2143678/100‑1 (MQ=255) ctctTCCATTGAGGAAAACATCGGGATCATGATTTTCAGGATGACGTGAACGGAGGCGCGGAGGATCGACCGTAGCTGCGTAGTAAACAACGACGCGTa > 2:453932/1‑99 (MQ=255) tctTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTAct > 2:1518643/1‑100 (MQ=255) tctTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTAc > 2:1064951/1‑99 (MQ=255) ctTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTActc > 2:1832088/1‑100 (MQ=255) tCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCtt > 1:774994/1‑100 (MQ=255) ccATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACGGTAGCTGCGTGGTAAACAACGACGCGTACTCTTc > 2:1255577/1‑100 (MQ=255) ccATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTc > 2:976607/1‑100 (MQ=255) cATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTc < 2:47246/99‑1 (MQ=255) cATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCa < 1:1839468/100‑1 (MQ=255) cATTGAGGAGATCAGCGGGATCATGATTTTCAGTCTGCCGTGAGCGGAGTCGCGGAGGATCGACCGTAGCTTCGTGGTAAACACCGACGCGTACTCTTCa > 2:1395242/1‑100 (MQ=255) aTTGAGGAGATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCAt < 2:1860274/100‑1 (MQ=255) tttaggagATCATCGGGATCATGAGTTTCAGGCTGCCGTGGGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAATCAACGACGCGTACTCTTCAt < 2:2257432/96‑1 (MQ=255) tGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATaa < 1:592155/100‑1 (MQ=255) gaggagATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATaaa > 1:2335867/1‑100 (MQ=255) aggagATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAAt < 1:660053/100‑1 (MQ=255) aggagATCATCGGGATCATGATGTTTAGGCTGTCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTTGTAATTTTTTACGCGTACTCATCATa < 2:887873/97‑1 (MQ=255) ggagATCATCGGGAACATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATa > 2:2234514/1‑100 (MQ=255) gagaTCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATAc < 1:2046029/100‑1 (MQ=255) agaTCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACg > 2:1888332/1‑100 (MQ=255) atcatcGGGAGCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCa > 1:934287/1‑100 (MQ=255) tcatcGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCAc > 1:2175971/1‑100 (MQ=255) cGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCACGgcg > 1:1802010/1‑100 (MQ=255) cGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCACGgcg > 1:958442/1‑100 (MQ=255) ggATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGGGGTAAACAACGACGCGTACTCTTCATAAATACGCACGGcgcg > 2:590235/1‑100 (MQ=255) aTCATGATTTTCAGGCTGCCGTGAGCGGAGTCGCGGAGGATCGACTGTAGCTGCGTGGTAAACAACGACGTGTACTCTTCATAAATACGCACGGCGCGa < 2:304908/99‑1 (MQ=255) | CTCATCAAACGGAATGTGTTCGTTACGTAGTTGCTGTTTGGCTTCCGCCAGTTTTTCTTTCACCCATAAGATCTCTTCCATTGAGGAGATCATCGGGATCATGATTTTCAGGCTGCCGTGAGCGGAGGCGCGGAGGATCGACCGTAGCTGCGTGGTAAACAACGACGCGTACTCTTCATAAATACGCACGGCGCGATA > NC_000913/4140620‑4140817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |