| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,568,688 | C→A | 52.6% | intergenic (‑169/‑310) | mdtM ← / → yjiP | multidrug efflux system protein/pseudogene, transposase_31 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,568,688 | 0 | C | A | 52.6% | 4.5 / 170.9 | 121 | intergenic (‑169/‑310) | mdtM/yjiP | multidrug efflux system protein/pseudogene, transposase_31 family protein |
| Reads supporting (aligned to +/- strand): ref base C (27/30); new base A (42/21); total (69/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.22e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAA > NC_000913/4568590‑4568786 | gacacttGATAAGGGCAACGAGACTGCAAATGAACTGAAGTTCATGTCATCAACCACCCTGCCTGTGAACACGCAGACATATAAATACTTTCTGAGTTCg < 2:2247831/94‑1 (MQ=255) cAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCggg < 2:1212658/100‑1 (MQ=255) cAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAggg > 1:1281127/1‑100 (MQ=255) cAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAggg > 2:1909601/1‑100 (MQ=255) aGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGt < 1:1367790/100‑1 (MQ=255) gTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCa > 2:1734358/1‑100 (MQ=255) gagaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGa > 1:915465/1‑100 (MQ=255) gaAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAAt > 2:2312378/1‑100 (MQ=255) taGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATg < 1:2352916/99‑1 (MQ=255) aaGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATg < 1:913828/100‑1 (MQ=255) aaGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATg > 1:2387874/1‑100 (MQ=255) aaGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATg < 2:2280699/100‑1 (MQ=255) aGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATga > 2:2352888/1‑99 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGta < 2:278271/100‑1 (MQ=255) gggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGta < 1:1780929/100‑1 (MQ=255) ggCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGta < 1:1273433/99‑1 (MQ=255) cgCAACGAGACTGCAAATGAACTGAATATCATGAAATCAACAACACAGACAGTGAACACACAGATAGAGAAATACTTTGTGACTTCTTATCAGAATGtat > 2:1254986/2‑100 (MQ=255) cAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATaa > 2:1851105/1‑100 (MQ=255) aaCGAGACTGCAAATGTACTGACTTTCATGTCATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAAc < 2:1618165/100‑1 (MQ=255) aaCGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAAc > 2:1553766/1‑100 (MQ=255) aCGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACg < 2:547635/100‑1 (MQ=255) gagaCTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAt < 2:2218580/100‑1 (MQ=255) agaCTGTAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGAtt < 1:582378/100‑1 (MQ=255) aCTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGtatttctctgtc > 1:1376944/1‑91 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAAt > 2:830730/1‑100 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAAt > 1:1269977/1‑100 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAAt > 2:1747906/1‑100 (MQ=255) cAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAAt > 2:422499/1‑100 (MQ=255) aaTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAg < 2:1655664/100‑1 (MQ=255) aTGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGt < 2:2048748/100‑1 (MQ=255) aCTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGtcatc < 2:862208/100‑1 (MQ=255) tGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAg < 2:2011330/100‑1 (MQ=255) tccgatcttGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGc < 2:2021291/92‑1 (MQ=255) aaTTTCATGTAATCAACCACACTGCATGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGca < 1:598223/100‑1 (MQ=255) aTTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGcac > 2:36547/1‑100 (MQ=255) aTTTCATGTAATCAACCACACTACCTGTGAACACACAGACAGAGAAATAATTTCTAACTTCGGGTCAGAATGTATAACGATTAG‑AAATAGTCATCAacac > 2:1541383/1‑100 (MQ=255) tCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACAtt < 2:779698/100‑1 (MQ=255) cATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTa > 2:1032162/1‑100 (MQ=255) cATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTa > 1:674164/1‑100 (MQ=255) cATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTa > 2:523053/1‑100 (MQ=255) aTGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTac > 2:1995235/1‑100 (MQ=255) tGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGcagatcgga > 1:2021313/1‑93 (MQ=255) tAATCCACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACAcc > 2:1485177/1‑100 (MQ=255) tAATCAACCACACTGCCTGTGAACACACAGACAGAGAATTACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACAcc > 2:1473671/1‑100 (MQ=255) tAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACAcc > 2:1917671/1‑100 (MQ=255) tAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACAcc > 1:537131/1‑100 (MQ=255) aTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACct > 1:661725/1‑99 (MQ=255) aTCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACct > 1:1879154/1‑99 (MQ=255) cAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCtt < 1:1344846/100‑1 (MQ=255) aCCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGa < 1:1032173/100‑1 (MQ=255) ccACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGaa < 1:1611366/100‑1 (MQ=255) ccACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGaa < 1:2182386/100‑1 (MQ=255) acacTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATATTCATCAGCACATTACACCTCTTGAAtt > 2:872559/1‑100 (MQ=255) acTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGa > 2:1061550/1‑100 (MQ=255) cTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACATCTTGAATTGAt > 1:1164661/1‑100 (MQ=255) tGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATg < 2:707841/100‑1 (MQ=255) tGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATg < 1:2249283/100‑1 (MQ=255) gCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATgg > 2:482880/1‑100 (MQ=255) ccTGTGAACCCAAAGAAAGAGAAAAAATTTCTGAGGTAGGCACAGAATGTATAACGATTAC‑AAATAGTCATCAACACATTACAGCTCTGGAATTGATggg > 2:245237/1‑100 (MQ=255) ccTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATgg > 1:219027/1‑99 (MQ=255) cTGTGAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAAAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTAATggg > 2:2180265/1‑99 (MQ=255) tgtgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGtt > 2:915659/1‑100 (MQ=255) tgtgAACACACAGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGtt > 1:230761/1‑100 (MQ=255) gtgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTg > 1:5492/1‑100 (MQ=255) tgAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGc < 2:272508/100‑1 (MQ=255) gAACAAACAGACAGAGAAATTCTTTCTGACTTAGGGTCAGAATGTATAACGATTACAAAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGc < 1:204340/100‑1 (MQ=255) cacacaGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAg > 2:1333464/1‑100 (MQ=255) cacacaGACAGAGAAATACTTTCTGACGTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAg < 1:278759/100‑1 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaa > 2:601691/1‑100 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGTTTGCATAGaa > 1:707314/1‑100 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaa > 1:849540/1‑100 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaa > 2:1111877/1‑100 (MQ=255) cacaGACAGAGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaa > 1:1547523/1‑100 (MQ=255) cagacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGaaaa > 2:70446/1‑100 (MQ=255) agacagaGGAATACTTTCTGACTTCGGGTCAGAATATATAACGATTAC‑AAATAGTCATCATCATATTACACCTCTTGATTTGATGGGTTGCATAGaaan < 2:88761/99‑2 (MQ=255) agacagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAat < 1:673167/100‑1 (MQ=255) acagaGAAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAata < 1:338426/99‑1 (MQ=255) cagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata > 2:689031/1‑100 (MQ=255) cagaGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAAtata > 1:2204815/1‑100 (MQ=255) agaAATACTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAACATATacac > 2:1519616/1‑100 (MQ=255) aaTACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATTGGTTGCATAGAAAATATACACCtt > 2:1981364/1‑100 (MQ=255) aTACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTa < 2:63563/100‑1 (MQ=255) aCTTTCTGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTaan < 2:1596177/100‑2 (MQ=255) cTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTTACGAGCACATTACACCTCTTGAATTAATGGGTTGGAGAGATAATATACACCtt > 2:2098273/1‑96 (MQ=255) tttCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTaa > 1:705623/1‑97 (MQ=255) ttCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtgt < 1:447465/100‑1 (MQ=255) ttCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtgt > 1:1800513/1‑100 (MQ=255) cTGACTTAGGGTCAGAATTTATAACGATTAC‑AAATAGTCATCAGCAAATGACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAgtgt < 2:189155/98‑1 (MQ=255) tGATTTCGTGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTTAATTGATAGGTTGTATAGAAAATATACACCTTAAGTGTAAt < 2:1609980/100‑1 (MQ=255) tGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 1:915670/100‑1 (MQ=255) tGACTTCGGATCAGAATGTATAACGATTAC‑AAATAGTCATCAGAACATTACACCTCTTGAATTGATGGGTTGGATAGAAAATATACACCTTAAGTGTAAt < 2:235991/100‑1 (MQ=255) tGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt > 2:1661858/1‑100 (MQ=255) tGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 1:1789996/100‑1 (MQ=255) tGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 1:1384880/100‑1 (MQ=255) tGACTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAAt < 1:1251006/100‑1 (MQ=255) aCTTTGGGTCGGAATGTATAACGATTAG‑TAATAGGCATCAGCATATTACGCCTCTTGAATTGTTGCGTTGCATAGAACACATACGTCTTTGGTGTAAt < 2:1904373/98‑1 (MQ=255) aCTTCGGGTCATAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTa < 2:2040650/100‑1 (MQ=255) aCTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTa > 2:136165/1‑100 (MQ=255) aCTTAGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTa > 1:47010/1‑100 (MQ=255) tCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTaaaa > 1:515455/1‑100 (MQ=255) | GGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATCAACCACACTGCCTGTGAACACACAGACAGAGAAATACTTTCTGACTTCGGGTCAGAATGTATAACGATTAC‑AAATAGTCATCAGCACATTACACCTCTTGAATTGATGGGTTGCATAGAAAATATACACCTTAAGTGTAATTAAAA > NC_000913/4568590‑4568786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |