| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 575,915 | T→A | 41.7% | pseudogene (911/1040 nt) | nmpC ← | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 575,915 | 0 | T | A | 41.7% | 62.9 / 101.7 | 93 | pseudogene (911/1040 nt) | nmpC | DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| Reads supporting (aligned to +/- strand): ref base T (26/27); new base A (16/22); total (42/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACGA > NC_000913/575816‑576014 | aTTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAt > 2:86682/1‑100 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGTTCGCCCCATACTCCAAGAAcc < 2:1004790/100‑1 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATcc < 2:2233977/100‑1 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATcc < 1:2194486/100‑1 (MQ=255) tttGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAAcc < 1:1715925/100‑1 (MQ=255) ttGTAATCAACGAAAGTAGACATATTTTTGTTGAATTAATATGTCGCACCTACATCAACATATTTGACTAAGTCCTGATCCCCCCATACTCCAAGATCCt > 2:2281500/1‑100 (MQ=38) gTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTa < 2:1441444/100‑1 (MQ=255) gTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTa < 1:2325188/100‑1 (MQ=255) aaTCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTAcc > 1:540839/1‑100 (MQ=255) tCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAaccttacctt > 2:2244122/1‑100 (MQ=255) aaCGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTa > 1:631923/1‑100 (MQ=255) aaCGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTa > 2:219898/1‑100 (MQ=255) cGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGACCCATACTCCAAGAACCTTACCttt > 2:2180907/1‑97 (MQ=255) aaaaGTAGACATATTTTTGTTGAAGTAATAGATTGCACCTACATCAACATATTTGACTAAGTACTCATCGCCCCAAACTCTAAGAACCTTAACTTTAGac > 2:1907458/2‑99 (MQ=255) gTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGc < 2:2394641/99‑1 (MQ=255) aGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAgg < 1:1834051/100‑1 (MQ=255) aGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAgg < 2:1156772/100‑1 (MQ=255) aCATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTa < 2:641512/100‑1 (MQ=255) cATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTaa > 2:2155328/1‑100 (MQ=255) cATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTaa > 1:1941961/1‑100 (MQ=255) cATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTaa > 1:184331/1‑100 (MQ=255) tatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGc < 2:631920/100‑1 (MQ=255) tatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGc > 1:1775753/1‑100 (MQ=255) tatTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGc < 1:1530578/100‑1 (MQ=255) atTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCa < 2:2311371/100‑1 (MQ=255) ttttGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGAAac > 1:621833/1‑100 (MQ=255) ttttGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAac < 2:814902/100‑1 (MQ=255) tttGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacg < 2:602707/100‑1 (MQ=255) gttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggac > 2:1852339/1‑100 (MQ=255) gttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggac > 2:2161306/1‑100 (MQ=255) ttgAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggacg > 1:2058235/1‑100 (MQ=255) tgAAGTAATAGGTTGCACCTACATCAAAATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAacggacgg > 2:1166625/1‑100 (MQ=255) aaGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACggacggac > 2:1151665/1‑100 (MQ=255) gTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGc < 1:1729936/100‑1 (MQ=255) gTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGc > 1:280226/1‑100 (MQ=255) aTAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGa > 2:292042/1‑100 (MQ=255) aTAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGa < 2:1047504/100‑1 (MQ=255) tAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGAc > 1:999322/1‑100 (MQ=255) aGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGAcc < 2:151709/100‑1 (MQ=255) ggTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGAcc > 2:458666/1‑99 (MQ=255) ggTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGAcc > 1:87035/1‑99 (MQ=255) tGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTTCAAGACCCTTACCTTTAGTTTGCATGTAATCAACGGACGGACGCAGa < 2:1047626/94‑1 (MQ=255) aCCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCg < 1:1678319/100‑1 (MQ=255) aCCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCg < 1:1337614/100‑1 (MQ=255) ccTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGa > 2:1171121/1‑100 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc > 2:2275318/1‑100 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc < 2:1217592/100‑1 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc < 2:650017/100‑1 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc < 1:373320/100‑1 (MQ=255) tACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAAc > 2:1645720/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 2:2339068/1‑100 (MQ=255) cATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTg > 2:597285/1‑100 (MQ=255) cAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGata > 2:1016697/1‑100 (MQ=255) cAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACAGAAATCGAACTGcta > 2:1486549/1‑100 (MQ=255) aaCATATTTGACTAAGTCCTGATCGCCCCATATTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGatat > 2:1781538/1‑100 (MQ=255) cATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATtg < 1:1763107/100‑1 (MQ=255) atatTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATtgt < 2:2269974/100‑1 (MQ=255) tatTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATtgtg < 2:1495927/100‑1 (MQ=255) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc < 1:1938587/100‑1 (MQ=255) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGAACGCAACGGACGGCCCCAGCCCGAAATCGAACTGCTATtgtcc > 2:2055055/1‑98 (MQ=37) atTTGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc < 1:1064266/100‑1 (MQ=255) tttGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGc < 2:1634024/99‑1 (MQ=255) tttGACTAAGTCCTGATCGCCCCATACTCCAAGACCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCa < 1:1099629/100‑1 (MQ=255) tGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAAc < 1:1236403/100‑1 (MQ=255) tGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAAc < 2:1204987/100‑1 (MQ=255) tGACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAAc > 2:2368406/1‑100 (MQ=255) gACTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACa < 2:1556488/100‑1 (MQ=255) cTAAGTCCTGATCGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGc > 1:1120866/1‑100 (MQ=255) tAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCt < 2:833598/100‑1 (MQ=255) aaGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTACAGGTAAGCAACGGACACACGCAGACAGAAATCGAACTGATATATCACAACAGCt > 2:2238964/1‑99 (MQ=37) gTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCg < 1:305102/100‑1 (MQ=255) gTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCg < 2:1539146/100‑1 (MQ=255) tCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCg < 1:669772/99‑1 (MQ=255) cGCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGGCGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGtttt > 1:640802/1‑99 (MQ=255) gCCCCATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTgg < 2:1249824/100‑1 (MQ=255) gCCCCATACTCAAAGAACCTTACCTTTAGATTGCAGGTAAGCAAAGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTgg < 1:107840/100‑1 (MQ=255) ccccATACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGtttt > 1:799115/1‑97 (MQ=255) ccATAATCCAAGAACCTTACCTTTAGATTGCAGGTAATCAACGGACGGACCCAGACCGACATCGAACTTATCTTGCGCCACCGCATCGAAgctccac > 2:2190889/1‑91 (MQ=19) cctACTCCAAGAATCTTTACTTTAGATTTCATGTAATCAACGGACTGACGCAGACCGTAATCGAACTGGTATTGTGCTAGAGCTTCGAAGTTTTGGGc < 2:748757/96‑1 (MQ=16) tACTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTtta < 1:2244148/100‑1 (MQ=255) aCTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttat < 2:1930219/100‑1 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt < 1:51671/100‑1 (MQ=255) cTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt > 1:1261812/1‑100 (MQ=255) cTCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatt < 2:2109507/100‑1 (MQ=255) tCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatta < 1:219901/100‑1 (MQ=255) tCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatta < 1:2329046/100‑1 (MQ=255) tCCAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTttatta < 2:2061473/100‑1 (MQ=255) ccAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAg > 2:1404611/1‑100 (MQ=255) ccAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAg > 1:765559/1‑100 (MQ=255) ccAAGAACCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAg > 1:1888441/1‑100 (MQ=255) cAAGATCCTTACCTTTCGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTtta < 2:2361025/95‑1 (MQ=255) cAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTCTATTAGc > 2:808751/1‑100 (MQ=255) aaGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGATCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCa > 1:637568/1‑100 (MQ=255) gATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAAc < 1:1171132/100‑1 (MQ=255) aTCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACg < 1:2344763/100‑1 (MQ=255) tCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACGa > 1:1798193/1‑100 (MQ=255) | ATTTTGTAATCAACGAAAGTAGACATATTTTTGTTGAAGTAATAGGTTGCACCTACATCAACATATTTGACTAAGTCCTGATCGCCCCATACTCCAAGATCCTTACCTTTAGATTGCAGGTAAGCAACGGACGGACGCAGACCGAAATCGAACTGATATTGTGCAACAGCTTCGAAGTTTTGGGCTTTATTAGCAACGA > NC_000913/575816‑576014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |