| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 190,553 | Δ14 bp | coding (680‑693/726 nt) | rpsB → | 30S ribosomal subunit protein S2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 190552 | 2 (0.030) | 57 (0.890) | 49/196 | 0.3 | 95.8% | coding (679/726 nt) | rpsB | 30S ribosomal subunit protein S2 |
| ? | NC_000913 | 190567 = | 3 (0.050) | coding (694/726 nt) | rpsB | 30S ribosomal subunit protein S2 | |||||
CGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190455‑190651 | cGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCca < 1:810405‑M1/100‑3 (MQ=255)cGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCca < 1:188036‑M1/100‑3 (MQ=255) gtTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcg < 1:498057‑M1/100‑7 (MQ=255) gtTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATc > 2:1227645/1‑100 (MQ=255) tGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcgga < 2:619961‑M1/100‑9 (MQ=255) tGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcgga > 2:246628‑M1/1‑92 (MQ=255) gACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaa > 2:540971‑M1/1‑91 (MQ=255) aCTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaag < 1:798938‑M1/100‑11 (MQ=255) cGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaag < 2:913632‑M1/100‑15 (MQ=255) gTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagc > 2:697002‑M1/1‑85 (MQ=255) gTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagc > 2:1169592‑M1/1‑85 (MQ=255) tATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagctt < 2:650160‑M1/100‑18 (MQ=255) aTCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttc < 1:29762‑M1/100‑19 (MQ=255) tCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcg < 2:484232‑M1/100‑20 (MQ=255) tCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttc > 2:165945‑M1/1‑81 (MQ=255) tCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcagacggaagaaagcttcg < 2:1430130‑M1/100‑20 (MQ=255) cccGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgt < 1:964030‑M1/100‑21 (MQ=255) gggTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtaga < 1:560755‑M1/100‑24 (MQ=255) gTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaag > 1:1560163‑M1/1‑75 (MQ=255) tAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTCAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagc < 2:965519‑M1/100‑27 (MQ=255) acgacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctg < 1:694246‑M1/100‑29 (MQ=255) gacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgag < 1:451616‑M1/100‑31 (MQ=255) gacgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgag > 2:1162074‑M1/1‑70 (MQ=255) cgacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagta > 2:1403498‑M1/1‑68 (MQ=255) gacgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaa < 2:1294495‑M1/100‑34 (MQ=255) acgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaat > 1:586086‑M1/1‑66 (MQ=255) cgCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaata < 1:1565749‑M1/100‑36 (MQ=255) cAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataag < 1:1402628‑M1/100‑38 (MQ=255) ccGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggctt > 1:1334115‑M1/1‑59 (MQ=255) cGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggtggaagaaagcttcgtagaagctgagtaataaggcttg < 1:1036248‑M1/100‑43 (MQ=255) cGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttg > 2:634547‑M1/1‑58 (MQ=255) tGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgat < 1:587337‑M1/100‑45 (MQ=255) tGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgat < 1:466816‑M1/100‑45 (MQ=255) ccTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactccccc < 1:717006‑M1/100‑54 (MQ=255) tACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaa > 1:448447‑M1/1‑43 (MQ=255) tACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaa > 2:695579‑M1/1‑43 (MQ=255) aCCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaat < 1:634550‑M1/100‑59 (MQ=255) aCCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaat < 2:648605‑M1/100‑59 (MQ=255) tGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagt > 2:1233681‑M1/1‑39 (MQ=255) ggCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTTcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttc < 1:282754‑M1/100‑64 (MQ=255) gcgcTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcg < 2:412810‑M1/100‑65 (MQ=255) cgcTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcga > 2:605309‑M1/1‑35 (MQ=255) gcTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgag > 1:843991‑M1/1‑34 (MQ=255) cTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagt < 1:1124934‑M1/100‑68 (MQ=255) gTTGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttg > 1:382678‑M1/1‑31 (MQ=255) ttGCTGCAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgc < 2:1040963‑M1/100‑71 (MQ=255) tgctgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgca > 2:774866‑M1/1‑29 (MQ=255) tgctgcAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCaaaa > 2:1281206/1‑100 (MQ=255) gctgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcag < 1:1169599‑M1/100‑73 (MQ=255) gctgcAACCGTACGTGAAGGCCGTTCTCcaggcggaaaaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcag > 2:841481‑M1/1‑28 (MQ=255) tgcAACCGTACGTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaa > 2:698490‑M1/1‑26 (MQ=255) gTGAAGGCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagc < 1:478896‑M1/100‑86 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag < 2:514851‑M1/100‑91 (MQ=255) ggCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgag < 2:68926‑M1/100‑91 (MQ=255) gCCGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgaga < 1:246629‑M1/100‑92 (MQ=255) ccGTTCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaa > 2:444491‑M1/1‑8 (MQ=255) ttCTCcaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattc < 1:122240‑M1/100‑96 (MQ=255) tccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccg < 1:841487‑M1/100‑99 (MQ=255) tccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccg < 2:843985‑M1/100‑99 (MQ=255) ccaggcggaagaaagcttcgtagaagctgagtaataaggcttgataactcccccaaaatagttcgagttgcagaaaggcggcaagctcgagaattcccgg > 1:1522797‑M1/1‑1 (MQ=255) | CGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGC > NC_000913/190455‑190651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |