| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2651755 | 84 (0.780) | 15 (0.150) | 11/162 | NT | 15.5% | coding (533/4962 nt) | yfhM | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein |
| ? | NC_000913 | = 2651772 | 87 (0.890) | coding (516/4962 nt) | yfhM | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein | |||||
TGGCTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2651650‑2651755‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgccagCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCCAGA < NC_000913/2651772‑2651674 TGGCTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTT > 1:92909/1‑100 CTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGGCTTTGC < 2:2940845/100‑1 CTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGC > 1:2144324/1‑100 CTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGC > 2:25576/1‑100 ATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGATGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAG < 1:996148/100‑1 ATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAG < 1:1598917/100‑1 ATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAG < 1:789957/100‑1 TGGCTTAACGCGAAAGAAGTTAACATCTACATTATTAACTTTAAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCTAGCCGTGGTTCGCTGCTGCCT < 2:2887977/99‑1 ACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGT > 1:2012082/1‑100 ACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGT < 1:392245/100‑1 ACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGT < 1:416124/100‑1 CGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTC < 1:2856750/100‑1 CGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTC < 2:2166738/100‑1 CGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACAACTTTGCCAGCCGTGGTTCGCTGCAGCCTGGCAAAGTC < 2:1873519/100‑1 CGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGT < 2:514773/100‑1 CGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGT < 1:1354707/100‑1 GGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTT < 1:335636/100‑1 GAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTG < 1:981672/100‑1 AGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAA < 2:2012059/100‑1 AGTTAACATCGACATTATTAACGTTGAGCGCCATTACCAGCCGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAG < 2:2590928/89‑1 ttaAGCGCTATTACTGGTAGCCCTTCAACGACTTTTTCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGT < 1:556147/97‑1 GCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAAT > 2:2310352/1‑100 TTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTA < 2:2001639/100‑1 TTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAA < 2:1452164/100‑1 GCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGC > 2:1346112/1‑100 GCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAG > 1:469285/1‑99 CCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCC > 1:579979/1‑100 CAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCC < 2:1069931/99‑1 GCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCCAGA < 1:2163440/100‑1 TGGCTAATGAATGCTGGCAGAGATTCTGGCTTAACGCGGAAGAAGTTAACATCGACATTATTAACGTTGAGCGCCATTACCGGCAGCCCTTCAACGACTTTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2651650‑2651755‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgccagCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCCAGA < NC_000913/2651772‑2651674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |