| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4593915 = | 123 (1.140) | 6 (0.060) | 4/166 | NT | 5.5% | coding (808/1362 nt) | lgoT | putative L‑galactonate:H+ symporter |
| ? | NC_000913 | 4593939 = | 93 (0.920) | coding (784/1362 nt) | lgoT | putative L‑galactonate:H+ symporter | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4594019‑4593915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcaTTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGCTTGC > NC_000913/4593939‑4594036 CAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGG < 1:1303691/100‑1CAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGG < 1:448603/100‑1 GGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGACTGATGCTCGGATTCAGTGGCA > 2:2273836/1‑100 GGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCA > 1:315976/1‑100 GGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCA < 1:2877753/100‑1 CGTCAAGGCTCTCCGTGATCCTCTCAGTTTTGCCGAATGGCGCAGCCTGTTCTGTAACCGTACAATTTGGGGAATGATGCTCGGATTCAGTGGCATC < 2:2320274/97‑1 GGGGAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATT > 1:501613/1‑100 GGGAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTG > 1:1254814/1‑100 GGGAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTG > 1:1409532/1‑100 GGGAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACAGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGACGGGCAT > 1:637899/1‑98 GGAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGA > 1:253917/1‑100 GAATGATGCTCGGATTCAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGAC > 1:3024777/1‑100 CAGTGGCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGA < 2:253914/100‑1 ccgGGCATCACTCCCCACATTGGATGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTG < 2:2351242/93‑1 GCATCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGC > 1:2829017/1‑100 TCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGCTTG > 1:1974513/1‑100 TCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGCTTG > 1:1392671/1‑100 TCATTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGAATATCGGCGAGCATTGACGCTACCTGCATTGAGATAAGCTTG > 2:2134446/1‑100 CATGCCCCACATTGTACCGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGCTTGC < 2:2079858/100‑1 CAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4594019‑4593915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcaTTCCCCACATTGTACGGTTACGGAACAGGCTGCGCCATTCGGCAAAACTGAGCGGATCTCGGCGGGCATTGACGCTACCTGCATTGAGATAAGCTTGC > NC_000913/4593939‑4594036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |