| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4632481 | 121 (1.120) | 6 (0.060) | 5/172 | NT | 4.7% | coding (1749/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4632501 | 129 (1.240) | coding (1769/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632380‑4632481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCAGGTAACTGGTG < NC_000913/4632501‑4632403 CCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGAC > 1:2861159/1‑100CCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGAC < 2:1075687/100‑1 CGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACC > 2:2222032/1‑100 CGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACC < 2:2496679/100‑1 CGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGACAATAAACGTATTTTCTCCTCAGCAGCTTATAACGCCGGACC > 1:147327/1‑100 CGGAAACGAATATCAACATGGGGACCAGTTAGCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGGATTTTCTCCTCAGCAGCTTATAACGCCGGACC > 2:2895921/1‑100 GTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAAGCCAGGTTCGCACCCGCCCTGGTCC < 1:186743/100‑1 GTTACCTGCAAGATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAAGCCAGGTTCGCACCCGCCCTGGTCC < 2:1414194/100‑1 TTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGA‑‑‑‑‑CCAGGTTCGCACCCGCCCTGGTCCGGCGTT < 1:1273806/100‑1 TACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAAGCCAGGTTCGCACCCGCCCTGGTCCGG < 2:1551334/100‑1 CCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAAGCCAGGTTCGCACCCGCCCTGGTCCGGCG < 1:542236/100‑1 ATGTTTATCAGCAGTTTGGCAATAATCTTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGC < 1:367664/100‑1 CCAAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCCGGTAACTGG > 2:2623766/1‑100 CAAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCAGGTAACTGGT > 2:2614288/1‑100 AAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCAGGTAACTGGTG > 1:2697091/1‑100 AAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCAGGTAACTGGTG > 2:1434220/1‑100 CCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632380‑4632481‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaAGCCAGGTTCGCACCCGCCCTGGTCCGGCGTTATAAGCTGCTGAGGAGAAAATACGATTATTGCCAAACTGCTGATAAACATATTGCAGGTAACTGGTG < NC_000913/4632501‑4632403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |