| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 149687 | 84 (0.780) | 15 (0.160) | 11/152 | NT | 16.2% | intergenic (‑86/+28) | panB/yadC | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/putative fimbrial‑like adhesin protein |
| ? | NC_000913 | = 149698 | 84 (0.910) | intergenic (‑97/+17) | panB/yadC | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase/putative fimbrial‑like adhesin protein | |||||
AGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/149576‑149687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtagcagcactgTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTTA < NC_000913/149698‑149601 AGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCC > 2:1652199/1‑100AGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTCATCAGTCACATTGGTGGGGGCAATGATTTATCC < 2:1974017/100‑1 TAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGT > 2:820091/1‑100 TAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGT < 1:2908733/100‑1 AAGGAGTTGGTGGTCGGTTTCATAACGTATGCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCAGTA > 2:2035577/1‑100 AGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGTATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAG > 2:2435547/1‑100 AGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAG > 1:1657967/1‑100 TGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCAC > 2:1293019/1‑100 GTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTG < 1:1276718/100‑1 GTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTG > 2:490756/1‑100 GTGGTCGGTTTCATAACGTATACTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTG > 2:2095/1‑100 ACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGT < 1:2167934/100‑1 atcTCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGC < 1:451467/97‑1 ATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCATATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTG < 1:28780/100‑1 ATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTn < 2:1278706/100‑2 TCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCATATTGGTGGGGGTAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGC < 1:757648/100‑1 TCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGC < 1:2357783/100‑1 TCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGC < 2:2124648/100‑1 CCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCagat > 2:451464/1‑96 CCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATAATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCT < 2:96184/100‑1 CTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCTA > 1:1547398/1‑100 TGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTAATATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCTAC < 1:484199/100‑1 GATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCTACG < 2:1175727/100‑1 GATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCTACG < 1:1436135/100‑1 AAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGTCACCTTCTGGCAGTGCTGCTACGGAT < 2:1547380/100‑1 ATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTGCCAGAAGGTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATG < 2:958646/98‑1 TAGCATCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAG < 1:1420686/100‑1 TAGCAGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAG > 1:24601/1‑100 TAGCAGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAG < 1:1748839/100‑1 AGCAGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATTTGACTGATAAAATGCCAGACAGCACAACTTCAATTTATCAcg < 1:2054197/100‑3 AGCAGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAG < 2:1778151/99‑1 CAGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGA > 1:394850/1‑99 AGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATA > 1:1246863/1‑100 AGCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGAT < 1:1701444/99‑1 GCACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATAC > 2:2876679/1‑100 CACTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACG < 1:361760/100‑1 CTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTT > 2:2639219/1‑100 CTGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTT > 2:683205/1‑100 TGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTTA < 2:796701/100‑1 TGTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTTA > 1:1337397/1‑100 AGTAAGGAGATGGTGGTCGGTTTCATAACGTATCCTGATAAATTGATGTTGTGCTGTCTGGCATTTTATCAGTCACATTGGTGGGGGCAATGATTTATCCGTAGCAGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/149576‑149687‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtagcagcactgTCACCTTCTGGCAGTGCTGCTACGGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGCCAGACAGCACAACATCAATTTATCAGGATACGTTA < NC_000913/149698‑149601 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |