New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 819757	NA (NA)	6 (0.060)	5/166	NT	NA	intergenic (+10/‑127)	moaE/ybhL	molybdopterin synthase, large subunit/putative acetate transporter; BAX Inhibitor‑1 family inner membrane protein
	?	NC_000913	= 819784	NA (NA)					noncoding (27/27 nt)	REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP74 (repetitive extragenic palindromic) element; contains 1 REP sequences

CACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAgccgga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/819659‑819757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCGTGG  <  NC_000913/819784‑819680                                                                                                                                                                                                              CACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAG                                                                                                          <  1:1071505/100‑1  ACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGCCCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAG                                                                                                          <  2:414553/99‑1   CCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGGGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGC                                                                                                         >  1:1176281/1‑99    cgaTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGAGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCG                                                                                                       <  1:504334/97‑1     GTTCTGGAAGCGCGAAGCCACGACGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTCGTTTTTTGTTAGCCG                                                                                                       >  2:1440148/1‑99       TCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGA                                                                                                     <  2:714728/99‑1          GGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGAGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGagatcg                                                                                                 >  2:504331/1‑94                            caGAAGGCGACCGCTGGTTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCT                                                                               <  1:721447/98‑1                              GAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCTAA                                                                             <  1:2793506/100‑1                               AAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCTAAC                                                                            <  1:388227/100‑1                               AAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCTAAC                                                                            <  2:2497220/100‑1                                AGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATTAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCTAACA                                                                           <  1:1048419/100‑1                                 GGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAGCCGGACGCAGCGGTGCCTTATCCGGCTAACAA                                                                          <  2:1722028/100‑1                                                                                                    GCCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGG       >  1:859280/1‑100                                                                                                    GCCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGG       <  2:1701797/100‑1                                                                                                    GCCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTACCGAGCTTCAACCCAGCGTTCGCCTTCCGG       >  2:1906034/1‑100                                                                                                     CCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGC      <  1:172745/100‑1                                                                                                      CGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCG     <  2:515387/100‑1                                                                                                       GGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCGT    >  2:782182/1‑100                                                                                                        GACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTGTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCGTG   >  1:2131548/1‑100                                                                                                         ACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCGTGG  >  2:2979276/1‑100                                                                                                                                                                                                              CACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAGTTTTTTGTTAgccgga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/819659‑819757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGACGCAGCGGTGCCTTATCCGGCTAACAAAAAACTACCAGCGTTTTGCCGCCTGCTGATCGCTCTCCCGAGCTTCAACCCAGCGGTCGCCTTCCGGCGTGG  <  NC_000913/819784‑819680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.