New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2568139 =NA (NA)7 (0.070) 4/164 NT NA noncoding (1/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 2568169 = NA (NA)noncoding (31/183 nt) REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 154 total aligned reads displayed.

ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238
                                                                                                   |                                                                                                   
 tCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTgg                                                                                                    <  2:2555676/100‑1 (MQ=255)
 cggataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtaggg                                                                                                    >  2:828527‑M1/99‑100 (MQ=255)
  ggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtaggg                                                                                                    <  2:1060126‑M1/2‑1 (MQ=255)
  ggataaggcgttcacgccgcatccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGc                                                                                                   >  1:419457‑M1/98‑100 (MQ=255)
  ggataaggcgttcacgccgcatccaccagtggcgcggtgcaattgccggatgcgacgcttgccccgtcttatcccgcctacgggattgcacatgtagGGc                                                                                                   <  2:2107335‑M1/3‑1 (MQ=255)
  ccTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGc                                                                                                   <  2:1513337/100‑1 (MQ=255)
  ccTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGc                                                                                                   <  1:2292802/100‑1 (MQ=255)
   cTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACGCCCTGTTAGTTGTTATTTATTGGCg                                                                                                  <  1:2573861/100‑1 (MQ=255)
    ataaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCgg                                                                                                 <  1:2994523‑M1/5‑1 (MQ=255)
      aaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGgan                                                                                               >  1:1791459‑M1/94‑99 (MQ=255)
      aaggcgttcacgccgcatccgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGAt                                                                                               <  1:1318170‑M1/7‑1 (MQ=255)
      aaggcgttcacgccgcatacgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGAt                                                                                               <  2:659149‑M1/7‑1 (MQ=255)
        tACGGCAGCTATCGGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgc                                                                                             >  1:2058984/1‑100 (MQ=255)
        tACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgc                                                                                             >  2:70558/1‑100 (MQ=255)
         aCGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCTCATCGCATTTACTCCTTGATAGTTGTTATTTATTTGCGGATg                                                                                              >  2:2068642/1‑98 (MQ=255)
         aCGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcg                                                                                            >  1:2172884/1‑100 (MQ=255)
         aCGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcg                                                                                            <  1:1416090/100‑1 (MQ=255)
            gCAGCTATCAGCATAAAGAACATCATTATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATgcggc                                                                                          <  1:43864/99‑1 (MQ=255)
              aGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTa                                                                                       >  2:2774592/1‑100 (MQ=255)
                cTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTaaa                                                                                     >  1:1045303/1‑100 (MQ=255)
                 tATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAAc                                                                                    >  2:1795307/1‑100 (MQ=255)
                  aTCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGAGGATGCGGCGTAAACg                                                                                   <  2:499437/100‑1 (MQ=255)
                     aGCATCAAGAACATTATGACGTACATGATGATTACGTTAATCCACATAGCCTTTACTAACTGATAGTTTTCATTTATTGGCGGATGCGGCGTCACCGCCt                                                                                >  2:1954750/1‑100 (MQ=255)
                     aGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCt                                                                                <  1:1437899/100‑1 (MQ=255)
                      gCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCtt                                                                               >  2:1575412/1‑100 (MQ=255)
                       tccgatctaCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTa                                                                              <  2:325934/92‑1 (MQ=255)
                       cATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTa                                                                              >  2:2702985/1‑100 (MQ=255)
                        ccgccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcaactgctgG‑CGGATGCGGCGTAAACGCCTTATc                                                                            >  1:1128045‑M1/76‑100 (MQ=255)
                         tAAAGTACATCATGTTTTACATGATGATTTCGTTAATTCGCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATAAGGCGTTCACGccgcatc                                                                            <  1:1024931/100‑6 (MQ=37)
                         tAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  1:1931434/1‑100 (MQ=255)
                         cgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  2:2543871‑M1/75‑100 (MQ=255)
                         cgccagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATc                                                                            >  2:122954‑M1/75‑100 (MQ=255)
                          gccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatctggctaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATcc                                                                           >  1:2540987‑M1/74‑100 (MQ=255)
                          gccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATcc                                                                           >  1:2291639‑M1/74‑100 (MQ=255)
                          gccagtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATcc                                                                           >  2:2766623‑M1/74‑100 (MQ=255)
                           aaGAACATCATGATGTAAAAGAAGATTACGATAATTCCCAACGCCTTTACTCCCTGTTATTTGTTATTTATTGGCGGATGCGACGTAAATGACTTAt                                                                             >  2:1054292/1‑97 (MQ=255)
                            cagtggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGc                                                                         <  2:2720658‑M1/29‑1 (MQ=255)
                            aGAACATCATTATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGc                                                                         <  1:2287724/100‑1 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcc                                                                        >  2:2893678/1‑100 (MQ=255)
                             gAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATAAGGCGTTTACGCCGCATCCGcc                                                                        <  2:2798029/100‑1 (MQ=37)
                             agtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccatgaggattgcacatgtagGGCGTATGCTGCGTAAACGCCTTATCCGcc                                                                        >  2:1225147‑M1/71‑100 (MQ=255)
                              gtggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggctaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGccc                                                                       >  1:1659497‑M1/70‑100 (MQ=255)
                               tggcgcggtgcagttgccggatgcaacgcttgccgcgttttatccggccaggaggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      >  2:108642‑M1/69‑100 (MQ=255)
                               tggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCTTAAACGCCTTATCCGCCCt                                                                      >  2:2512946‑M1/69‑100 (MQ=255)
                               tggcgcggtgcaattgccggatgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGCCCt                                                                      >  1:522111‑M1/69‑100 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTaagatcgga                                                                      >  1:325937/1‑92 (MQ=255)
                               aCATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCGGCCCt                                                                      <  2:2844717/100‑1 (MQ=255)
                                catcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                     >  1:660376/1‑100 (MQ=255)
                                 atcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATAAGGCGTTTACGCCGCATCCGccaata                                                                    <  2:1496225/100‑5 (MQ=25)
                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   <  2:290442/100‑1 (MQ=255)
                                  tcatGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                   >  1:1944544/1‑100 (MQ=255)
                                    atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                 <  2:1087443/100‑1 (MQ=255)
                                    atgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtg                                                                 <  2:2321843/100‑1 (MQ=255)
                                     tgatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgt                                                                >  2:367463/1‑100 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               <  2:2195020/100‑1 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               >  1:2649232/1‑100 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGACGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               >  1:808939/1‑100 (MQ=255)
                                      gatgTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAATTACTATTTATTGACGAATGCGGAGTAAACGACTAATCAAACCTACAtgtg                                                               >  1:628779/1‑100 (MQ=255)
                                        tgTACATGATGATTTCGTTAATGCCCATCGCCTTTTCTCCCGGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                               <  2:65479/98‑1 (MQ=255)
                                         gTAAATGCTGATTTCGTTATTTCCAATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGcctgacaagag                                                               <  2:556917/97‑10 (MQ=25)
                                              tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGAGGCGTAAACGCCTTATCCGCCCTAGATGTGCAATCCCg                                                       <  2:1868145/100‑1 (MQ=255)
                                               gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                      >  1:2616901/1‑100 (MQ=255)
                                                   atgcgacgcttgccgcgtcttatccagcctacgggattgcacatgtagGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGc                                                  >  1:2720690‑M1/49‑100 (MQ=255)
                                                   atTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGc                                                  >  2:2789114/1‑100 (MQ=255)
                                                        gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                             <  2:575059/100‑1 (MQ=255)
                                                         ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATa                                            <  2:134341/100‑1 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                      >  2:958666/1‑100 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgc                                      <  1:798894/100‑1 (MQ=255)
                                                               cccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATCTGCAATCGTGTAGGCTGGTTGAGAcg                                       >  2:889591/1‑99 (MQ=25)
                                                                 cATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAc                                        >  1:2656694/1‑96 (MQ=255)
                                                                 cATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCgg                                    >  2:1329379/1‑100 (MQ=255)
                                                                  aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGATGCGGc                                   >  1:1319358/1‑100 (MQ=255)
                                                                   tggCCTTTGCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTATGCTGGATAAGAAGCGGc                                   <  2:228036/97‑1 (MQ=18)
                                                                       cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                              <  1:2487774/100‑1 (MQ=255)
                                                                         ttACTCCCTGTTCGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTc                            >  1:1991231/1‑100 (MQ=255)
                                                                         ttACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTc                            <  2:1646585/100‑1 (MQ=255)
                                                                            cTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGACCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCa                         >  2:2924907/1‑100 (MQ=255)
                                                                              cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAgcatcgcatc                       >  1:2342987/1‑100 (MQ=255)
                                                                              cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                       >  1:1530975/1‑100 (MQ=255)
                                                                              cccTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                       >  2:1922407/1‑100 (MQ=255)
                                                                                 tGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGATGCGGCAAGCGTCGCATCCgg                    <  1:2749424/100‑1 (MQ=255)
                                                                                  gTTAGTTGTTCTTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTACGCTGGATAAGACGCGGCTAGCGTCGCATCCGGc                   <  2:1996686/100‑1 (MQ=255)
                                                                                  gTTAGTTGTTATTTATTGGCGGATGCGTCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGCCGCATCCGGc                   <  2:857943/100‑1 (MQ=255)
                                                                                   ttAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCgg                    <  2:903706/98‑1 (MQ=255)
                                                                                    tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                 >  1:2830180/1‑100 (MQ=255)
                                                                                    tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                 >  2:2206633/1‑100 (MQ=255)
                                                                                     aGTTGTTATTTATTGGCGGATGCGGTGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAt                >  2:2491746/1‑100 (MQ=255)
                                                                                       ttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTg              <  2:1168270/100‑1 (MQ=255)
                                                                                         gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCa            >  2:69431/1‑100 (MQ=255)
                                                                                         gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCa            >  1:2645473/1‑100 (MQ=255)
                                                                                         gttATTTATTGGCGGATGCGGCGTAAAAGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGc             >  2:2911559/1‑99 (MQ=255)
                                                                                             tttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAtttattgcgc        >  1:84905/1‑93 (MQ=255)
                                                                                             tttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgc        >  1:159872/1‑100 (MQ=255)
                                                                                             tttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgc        <  2:2857583/100‑1 (MQ=255)
                                                                                              ttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgcg       >  2:2657356/1‑100 (MQ=255)
                                                                                              ttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcgcg       >  1:1187980/1‑100 (MQ=255)
                                                                                               tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCgcgc      >  1:969285/1‑100 (MQ=255)
                                                                                                attGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGcc     <  1:2555599/100‑1 (MQ=255)
                                                                                                 ttGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGcc     <  1:2179437/99‑1 (MQ=255)
                                                                                                   GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt  <  1:1911922‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATCCTGTCTACGGCAGCTATCAGCATAAAGAACATCATGATGTACATGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACT  >  NC_000913/2568040‑2568238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.