New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)32 (0.310) 11/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 102 total aligned reads displayed.

AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225925‑226097
                                                                         |                                                                                                   
aGGTTAATGATGCGAACCGGGGGGACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCACCAGTAGCGGCGAGCGAAAGGGgaggag                                                                           >  2:466194/1‑100 (MQ=11)
aGGTTAATGAGGCGAACCGGGGGAACTGAAACTTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagggc                                                                           <  1:1134739/100‑3 (MQ=11)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGTGAACGGggagga                                                                            >  2:2065525/1‑98 (MQ=14)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          <  2:2659064/100‑1 (MQ=32)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          <  1:1423050/100‑1 (MQ=32)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:2562668/1‑100 (MQ=32)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:2352529/1‑100 (MQ=32)
 ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAAACGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                          >  1:1766272/1‑100 (MQ=18)
 ggTTAATGAGGCGAACCGGGGGAACTGAAAAATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGAGAACGGGGAGGAGc                                                                          >  2:2105653/1‑100 (MQ=12)
  gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                         >  2:2027746/1‑100 (MQ=33)
    tAATGAGGCGAACCGGGGTAATTTAAACATCTAAGTACCCCGATGAAAAGAAATCAACCGAGATTCCCCCAGGAGCGGCGAGCGAACGGGgaggag                                                                           <  1:1048336/96‑1 (MQ=11)
    tAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCa                                                                       <  1:2027769/100‑1 (MQ=33)
    tAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCACAGTAGCGACGAGCGAACGGGGAGGAGCCCa                                                                       >  1:842503/1‑100 (MQ=12)
     aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGGAGCGGCGCGCGAACGGGGAGGAGCCCag                                                                      >  2:704731/1‑100 (MQ=12)
      aTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCaga                                                                     <  2:2373115/100‑1 (MQ=33)
        gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                   <  1:874742/100‑1 (MQ=33)
         cggCGAACCGGGGGAACTGAAACACCTAAGTACCCCGAGGGAACGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGctccgaccc                                                                  >  2:2116212/2‑92 (MQ=11)
         aGGCGAACCGGGGGAACTGAAACATCTAATTTCCCTTAGTAAAAGAAATCAACCGAGATTCCCCAAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                  <  1:856734/100‑1 (MQ=11)
         aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAAACAAGATTCCCCCAATAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                   >  1:20904/1‑99 (MQ=255)
          ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGACCGGGGAGGAGACCag                                                                      >  2:563354/1‑95 (MQ=12)
          ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                 >  2:379247/1‑100 (MQ=33)
          ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGAGGCGAGCGAACGGGGAGGAGCCCACAGc                                                                   >  2:2074706/1‑98 (MQ=12)
           gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  1:1790995/100‑1 (MQ=33)
           gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                <  1:2530676/100‑1 (MQ=33)
            cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                               >  1:1684722/1‑100 (MQ=32)
              aaCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                             <  2:1270415/100‑1 (MQ=33)
              aaCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCAAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                             >  1:265096/1‑100 (MQ=17)
               aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            <  2:259227/100‑1 (MQ=32)
               aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            <  2:619884/100‑1 (MQ=32)
               aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGAGGCAAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                            >  1:881916/1‑100 (MQ=12)
                  gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                         >  2:2488688/1‑100 (MQ=32)
                   ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                        <  1:199319/100‑1 (MQ=33)
                    gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGGGCGAACGGGGAGGAGCCAAGAGCCTGACTCAgtgt                                                       >  2:289372/1‑100 (MQ=255)
                     tctaCTGAAACATCTAAGTACCCCGAGGAATAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  1:1931672/97‑1 (MQ=12)
                     ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  2:2335867/100‑1 (MQ=33)
                     ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                      <  1:2197636/100‑1 (MQ=33)
                       aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTATTGGCGAGCGAACGGGAAGGAGCCCAGAGCCTGAATAAgtgtgt                                                     >  1:458073/1‑99 (MQ=11)
                       aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    <  1:2153487/100‑1 (MQ=33)
                       aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                    <  2:2098685/100‑1 (MQ=33)
                        aCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCGGAATCAgtgtgaga                                                   >  2:1931649/1‑97 (MQ=12)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:2262892/1‑100 (MQ=33)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  1:1211549/1‑100 (MQ=32)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  <  2:2236744/100‑1 (MQ=32)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  <  1:2913710/100‑1 (MQ=33)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  2:1207883/1‑100 (MQ=32)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  1:2394133/1‑100 (MQ=32)
                         cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAACGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                  >  1:765082/1‑100 (MQ=17)
                          tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                 >  2:2940017/1‑100 (MQ=32)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgagtgtg                                                    >  2:2568749/1‑96 (MQ=18)
                           gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGAGTGCGtt                                                >  2:50575/1‑100 (MQ=12)
                             aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                              <  2:919422/100‑1 (MQ=33)
                                aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGATCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGt                                             >  2:2125186/1‑98 (MQ=17)
                                  cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGAAAGAGCCCAGAACCTGAATCAGTGTGTGTGTTAGTGGaa                                         >  1:2331289/1‑100 (MQ=255)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGATCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        <  2:2559231/100‑1 (MQ=17)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        >  2:2192154/1‑100 (MQ=32)
                                   tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        <  1:2951510/100‑1 (MQ=33)
                                    aaGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGTGATGAGCCCCGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                        >  2:2133292/1‑99 (MQ=255)
                                     aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCg                                      <  1:1468508/100‑1 (MQ=33)
                                      gaaCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCTGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGt                                     >  1:2054038/3‑100 (MQ=17)
                                       tACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTc                                    <  2:1912809/100‑1 (MQ=32)
                                        aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                   <  1:252375/100‑1 (MQ=32)
                                         ccccGAGGAAAAGAAATCAACCGTGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTc                                    <  1:1033947/98‑1 (MQ=18)
                                         ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAACCCAGAGCCTGAATCAGAGTGTGTGTTAGTGGAAGCGTCTg                                  >  1:771599/1‑100 (MQ=12)
                                           ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                <  2:1381906/100‑1 (MQ=33)
                                            cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaa                               <  2:1805599/100‑1 (MQ=33)
                                            cGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaa                               >  1:1358474/1‑100 (MQ=33)
                                               ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                            >  1:1102329/1‑100 (MQ=33)
                                               ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                            <  2:2985236/100‑1 (MQ=33)
                                                 aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAAAGCCTGAATCAGAGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:1394972/1‑100 (MQ=12)
                                                 aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAAAACCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                          >  1:124357/1‑100 (MQ=12)
                                                 aaaaGAAATCAACCGAGATTCACCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTATTGGAAGCGTCTGGAAAGgcg                          <  2:1104343/100‑1 (MQ=255)
                                                  aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                         >  1:2817804/1‑100 (MQ=33)
                                                   aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg                        <  1:2408729/100‑1 (MQ=32)
                                                   aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg                        <  2:1187238/100‑1 (MQ=33)
                                                     gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTTTGGAAAGGcgcgcg                      <  1:1282164/100‑1 (MQ=17)
                                                     gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                      <  2:2087220/100‑1 (MQ=33)
                                                       aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                    <  2:1380614/100‑1 (MQ=33)
                                                        aTCAACCGAGATTCCCCCAGTAGCGGCGAGAGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGAGTTAGTGGAAGCGTCAGGAAAGACGCGCGATa                   >  2:472946/1‑100 (MQ=11)
                                                         tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTAAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                   <  1:850700/99‑1 (MQ=17)
                                                          cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGACGCGCGATACa                 >  1:728657/1‑100 (MQ=18)
                                                           aaCCGAGATTCCCCCAGTAGCGGCGAGCGCACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGAAAAGGCGCGCGATACAg                >  1:250151/1‑100 (MQ=16)
                                                           aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                <  2:2817772/100‑1 (MQ=33)
                                                            aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                <  2:524580/99‑1 (MQ=32)
                                                            aCCGAGATTCCCCCAGTAGAGGCGAGCGAAAGGGGGGGAGCCCAAAGCCTGAATCAGTGTGTGTGTAAGTGGCAGCGTCTGGAAAGGCGCACGATACa                 >  2:1593988/1‑98 (MQ=11)
                                                             ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              <  1:2247397/100‑1 (MQ=33)
                                                               gggaTTCCGCCAGGAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg              <  2:2266458/96‑1 (MQ=255)
                                                               gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGGGCCCAAAACCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGATTGGCGCGCGTTACAGGGt             <  2:1412694/99‑1 (MQ=11)
                                                                agaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGa           >  1:2684068/1‑100 (MQ=33)
                                                                agaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGa           <  2:1722111/100‑1 (MQ=33)
                                                                 gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc          <  2:12437/100‑1 (MQ=33)
                                                                 gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc          <  2:126016/100‑1 (MQ=33)
                                                                  aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACa         <  1:2406387/100‑1 (MQ=32)
                                                                   ttCCCCCAGTAGCGGCGAGTGAACGGTGAGGAGTCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg        <  1:2456970/100‑1 (MQ=255)
                                                                     cccccAGTAGCTGCGAGCGAACGGGGAGGAGACCCGAGACTGAATCAGTGGCAGTGTTAGTGGAACCGGCTCGGAACGCGCGCGATACACGGTGACAGc       >  2:1697862/1‑99 (MQ=2)
                                                                      ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc     <  1:2457495/100‑1 (MQ=32)
                                                                      ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc     <  1:2488717/100‑1 (MQ=32)
                                                                      ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTATGGAAAGGCGCGCGATACAGGGTGACAg        >  2:1800134/1‑97 (MQ=18)
                                                                        ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg   >  1:2645848/1‑100 (MQ=33)
                                                                        ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGAGTGTGTTAGTGGAAGCGTCTAGAAAGGCGCGCGATACAGAGTGACAGCCCCg   >  1:1009931/1‑100 (MQ=255)
                                                                         cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGt  <  2:1614679/100‑1 (MQ=33)
                                                                         |                                                                                                   
AGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGT  >  NC_000913/225925‑226097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.