New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 349938NA (NA)14 (0.140) 5/164 NT NA noncoding (334/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 = 349969 NA (NA)noncoding (365/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 173 total aligned reads displayed.

TGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAA  >  NC_000913/349841‑350037
                                                                                                 |                                                                                                   
tGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGg                                                                                                    >  2:163706‑M1/1‑98 (MQ=255)
   tggtCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                <  2:2115607‑M1/99‑6 (MQ=255)
   aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                >  2:478954‑M1/1‑95 (MQ=255)
    ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               >  1:1867616‑M1/1‑94 (MQ=255)
    ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               >  2:1530082‑M1/1‑94 (MQ=255)
    ggTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               >  1:2115630‑M1/1‑94 (MQ=255)
     gTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgga                                                                                               >  1:1499337‑M1/1‑93 (MQ=255)
      tCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATa                                                                                             >  1:389691/1‑100 (MQ=33)
       cGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATaa                                                                                            <  2:1373118/100‑1 (MQ=33)
       cGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATaa                                                                                            >  2:662956/1‑100 (MQ=32)
        ggATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                <  2:831782‑M1/95‑6 (MQ=255)
        ggATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAg                                                                                           <  2:3032779/100‑1 (MQ=32)
        ggATAAGACGCATAGCGTCGCATCCGACAAACGATGCCTGATGCGCCGCTGACGCGAATTATCAGGCCCACGGGGTGAACTGAACTGTAGGTCGGATAAg                                                                                           >  2:684273/1‑100 (MQ=255)
         natAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGGGAACTGAACTGTAGgtcggatgcga                                                                                          >  1:578671‑M1/2‑89 (MQ=255)
         gATAAGACGCATAGCGTCGCATCCGACAACCGATTCCTGATTCGCCGCTGACACAACTAATCAGACCTAAGGGGTGAACTGAACTTTATGCCGGATAAGa                                                                                          >  1:955415/1‑100 (MQ=11)
         gATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGa                                                                                          <  1:3029401/100‑1 (MQ=32)
          acaaaccgcatacCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcgg                                                                                                <  2:730830‑M1/87‑6 (MQ=255)
          aTAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGan                                                                                         <  2:27853/100‑2 (MQ=18)
          aTAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGAc                                                                                         <  1:2925118/100‑1 (MQ=32)
          aTAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGAc                                                                                         >  2:145098/1‑100 (MQ=33)
           tAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACg                                                                                        >  1:2876912/1‑100 (MQ=33)
             aGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCa                                                                                      <  1:238296/100‑1 (MQ=32)
              gACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCAt                                                                                     <  2:346539/100‑1 (MQ=33)
               aCGCATAGCGTCGCATCCGACAATCGATTTCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATa                                                                                    <  1:2329912/100‑1 (MQ=255)
                cGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAg                                                                                   >  2:2715859/1‑100 (MQ=32)
                  cATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCg                                                                                 <  1:1369860/100‑1 (MQ=33)
                    tAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAg                                                                                   <  2:1534677/96‑1 (MQ=32)
                     aGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCg                                                                              <  1:145100/100‑1 (MQ=33)
                         tCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatc                                                                          <  1:372689‑M1/100‑28 (MQ=255)
                          cGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGgtcggatgcgacgctatgcgtcttatcc                                                                         <  2:2086186‑M1/100‑29 (MQ=255)
                          cGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGgtcggatgcgacgctatgcgtcttatcc                                                                         <  1:2153645‑M1/100‑29 (MQ=255)
                           gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCG                                                                        >  1:2605840‑M2/1‑100 (MQ=255)
                           gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCG                                                                        >  1:2432798‑M2/1‑100 (MQ=255)
                           gCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCG                                                                        >  1:662529‑M2/1‑100 (MQ=255)
                              tCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGaca                                                                     >  1:183961/1‑100 (MQ=32)
                              tCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                      >  2:2626679‑M2/1‑99 (MQ=255)
                                 gACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaaca                                                                  <  1:1367147/100‑1 (MQ=35)
                                 gACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGaca                                                                     <  2:753119/97‑1 (MQ=32)
                                    aaCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtc                                                               <  1:2715891/100‑1 (MQ=38)
                                    aaCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtc                                                               <  1:1070582/100‑1 (MQ=38)
                                     aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtct                                                              >  1:1780543/1‑100 (MQ=40)
                                     aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtct                                                              >  2:1023233/1‑100 (MQ=40)
                                     aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtct                                                              >  2:1743078/1‑100 (MQ=38)
                                     aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGAAGAATAGAGTCGCATCCGAcaacaaatt                                                              >  1:1742406/1‑97 (MQ=11)
                                      ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             <  2:1965126/100‑1 (MQ=40)
                                      ccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             >  1:308115/1‑100 (MQ=40)
                                       cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                            <  1:851917/100‑1 (MQ=40)
                                       cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                            <  1:1288175/100‑1 (MQ=255)
                                        gatctcTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtctc                                                             <  1:2021968/93‑1 (MQ=255)
                                        gATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGa                                                           <  2:2291674/100‑1 (MQ=255)
                                         aTGCCTGATGCGCCGCTGACGCGACTTATCAGGCTTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAc                                                          <  1:443832/100‑1 (MQ=255)
                                         aTGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAc                                                          <  2:1728684/100‑1 (MQ=255)
                                            ccTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCt                                                       >  2:2391914/1‑100 (MQ=255)
                                             cTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTa                                                      >  2:1902636/1‑100 (MQ=255)
                                              tGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTAc                                                     <  1:2322806/100‑1 (MQ=255)
                                              tGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTAc                                                     <  1:2123301/100‑1 (MQ=255)
                                               gATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACa                                                    <  2:2412209/100‑1 (MQ=255)
                                                  gcgcCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAAt                                                 <  1:760227/100‑1 (MQ=255)
                                                    gccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGa                                               <  1:783305/100‑1 (MQ=255)
                                                     ccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAAtaga                                              >  1:1631208/1‑97 (MQ=255)
                                                     ccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGAt                                              <  1:2759664/100‑1 (MQ=255)
                                                      cgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATa                                             <  1:682799/100‑1 (MQ=255)
                                                      cgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCAACAACAATCTCGACCCTACAAATGATa                                             <  1:1015817/100‑1 (MQ=255)
                                                       nctGACGCGACTTATCAGGCCTACGGAGTGAACTGAACTGTAGGTCGGCTAAGACGCATCGCGGCGCATCCGACctacagttcagttcaccccgtaggcc                                            <  2:578668‑M2/99‑27 (MQ=255)
                                                       gcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATaa                                            <  2:981279/100‑1 (MQ=255)
                                                           aCGCGACTTATCAGGCCTACGGGGTGAACTGTTCTTTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAAt                                        <  1:1985074/100‑1 (MQ=255)
                                                            cgcgTCTTATCTGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACaa                                         <  2:1079067/98‑1 (MQ=255)
                                                            cgcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATg                                       <  2:2624505/100‑1 (MQ=255)
                                                             gcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGa                                      <  2:2512606/100‑1 (MQ=255)
                                                                 cTTATCAGGCCTACGGGGTGAACTGAATTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                  <  1:522646/100‑1 (MQ=255)
                                                                 cTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                  <  2:1160432/100‑1 (MQ=255)
                                                                   tATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGa                                >  2:2234175/1‑100 (MQ=255)
                                                                     tCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtc                              <  2:279062‑M2/100‑41 (MQ=255)
                                                                      cAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCACAACCCTACAAATAATAACAATGACGAGGacaa                             >  1:1000193/1‑100 (MQ=255)
                                                                       aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                            <  2:700759/100‑1 (MQ=255)
                                                                       aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                            >  2:2032190/1‑100 (MQ=255)
                                                                       aGGCCTACGGGGTGAACTGAACTGAAGGTCGGATAAGACGCATAGCGGCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                            >  2:2784584/1‑100 (MQ=255)
                                                                        ggCCTACGGGGTGAACTGAACTGTAGgtcggatgcgccgcgatgcgtcttagccgacctacagttcagttcactccgtaggcctgataagtcgcgtcagn                           <  2:578668‑M1/100‑75 (MQ=255)
                                                                        ggCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaaca                           >  1:627251/1‑100 (MQ=255)
                                                                        ggCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaaca                           >  2:1026883/1‑100 (MQ=255)
                                                                         gCCTACGGGGTTAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATTATAACAATGACGAGGacaaca                           <  2:876567/99‑1 (MQ=255)
                                                                         gCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGGCGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACAt                          <  1:910269/100‑1 (MQ=255)
                                                                          ccTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATg                         >  2:2438350/1‑100 (MQ=255)
                                                                          ccTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATg                         <  1:2799206/100‑1 (MQ=255)
                                                                           cTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGa                        <  2:2876880/100‑1 (MQ=255)
                                                                             aCGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGc                      >  2:541845/1‑100 (MQ=255)
                                                                              cGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCg                     <  2:1936210/100‑1 (MQ=255)
                                                                                    gaactgaactGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACaa               >  1:56130/1‑100 (MQ=255)
                                                                                    gaactgaactGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGAAAACATGAGCGACACaa               >  2:1772818/1‑100 (MQ=255)
                                                                                     aactgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGTCGAGGACAACATGAGCGACACAAc              <  2:195685/100‑1 (MQ=255)
                                                                                     aactgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAAc              <  2:285500/100‑1 (MQ=255)
                                                                                      actgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACg             >  2:334069/1‑100 (MQ=255)
                                                                                        tgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACGCAACGAt           <  1:1588278/100‑1 (MQ=255)
                                                                                         gaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATc          >  1:1660884/1‑100 (MQ=255)
                                                                                          aactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc         <  2:1168321/100‑1 (MQ=255)
                                                                                          aactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc         <  1:1530100/100‑1 (MQ=255)
                                                                                          aactaTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc         <  2:623800/100‑1 (MQ=255)
                                                                                           actgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCt        >  2:840721/1‑100 (MQ=255)
                                                                                                aGGTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcgg   <  2:433268‑M2/100‑68 (MQ=255)
                                                                                                 ggTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGTCAACATGAGCGACACAACGATCCTGCaaaa  >  1:2260369/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
TGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAA  >  NC_000913/349841‑350037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.