BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2133462 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (31/34 nt)	REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3639209 =	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (1/98 nt)	RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP261 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 152 total aligned reads displayed.

GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGAT  >  NC_000913/2133363‑2133561

ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                                                     <  1:2589080/100‑1 (MQ=255)

ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                                                     >  1:2596608/1‑100 (MQ=255)

    tataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                  >  2:1281152/1‑99 (MQ=255)

       aGATTGAGATCAGCGTATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACTCCTTATCCGGCCTACgggg                                                                                              <  2:2597237/100‑1 (MQ=255)

          ttGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCgg                                                                                           >  1:2573548/1‑100 (MQ=255)

            gagaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTg                                                                                         >  2:455976/1‑100 (MQ=255)

             agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGt                                                                                          >  2:2218869/1‑98 (MQ=255)

             agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGc                                                                                        <  2:1125403/100‑1 (MQ=255)

             agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTACTTGCCGGATGCGACGTGAACGCCTTATCCGGCCTACGGGGCGGTGc                                                                                        >  1:1909831/1‑100 (MQ=255)

              gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGc                                                                                        <  1:241204/99‑1 (MQ=255)

              gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCg                                                                                       >  1:1270327/1‑100 (MQ=255)

              gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCg                                                                                       <  1:61065/100‑1 (MQ=255)

                   gCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGc                                                                                  <  1:314119/100‑1 (MQ=255)

                     ggATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAg                                                                                <  2:1043265/100‑1 (MQ=255)

                      gATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATg                                                                                   >  2:645040/1‑96 (MQ=255)

                      gATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAgg                                                                               >  2:1949904/1‑100 (MQ=255)

                          gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtc                                                                           <  2:434213/100‑1 (MQ=255)

                          gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgt                                                                            >  2:22549/1‑99 (MQ=255)

                           tttttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtcg                                                                          >  2:660600/1‑100 (MQ=255)

                           tttttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtcg                                                                          <  2:1583306/100‑1 (MQ=255)

                             tttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGtt                                                                        <  2:1444477/100‑1 (MQ=255)

                                cATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAtt                                                                     >  2:1379346/1‑100 (MQ=255)

                                cATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAtt                                                                     <  1:2069240/100‑1 (MQ=255)

                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  2:778236/1‑100 (MQ=255)

                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  1:1772280/1‑100 (MQ=255)

                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  1:2824025/1‑100 (MQ=255)

                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  2:328819/1‑100 (MQ=255)

                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  1:2331331/1‑100 (MQ=255)

                                     gttgttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                                                <  2:627293/100‑1 (MQ=255)

                                        gttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATcc                                                             >  1:1083806/1‑100 (MQ=255)

                                        gttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATcc                                                             >  1:2222839/1‑100 (MQ=255)

                                         ttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCg                                                            >  1:151895/1‑100 (MQ=255)

                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          >  1:766500/1‑100 (MQ=255)

                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          >  2:111090/1‑100 (MQ=255)

                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          >  1:2172153/1‑100 (MQ=255)

                                            tcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACt                                                         <  1:2078740/100‑1 (MQ=255)

                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                       <  1:2542328/100‑1 (MQ=255)

                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTCAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                       <  2:2044221/100‑1 (MQ=255)

                                                ggCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtata                                                     <  2:1571251/100‑1 (MQ=255)

                                                ggCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtata                                                     <  2:2331304/100‑1 (MQ=255)

                                                  cTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtatt                                                   >  2:127376/1‑100 (MQ=255)

                                                  cTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtatt                                                   >  1:59318/1‑100 (MQ=255)

                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                                                 >  1:1546613/1‑100 (MQ=255)

                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACACCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCATTATTTCGCATCCGACTTAtattcg                                                 <  1:321235/100‑1 (MQ=255)

                                                     aTGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgt                                                <  1:2513644/100‑1 (MQ=255)

                                                      tGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATTCTGTCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgta                                               <  1:1556043/100‑1 (MQ=255)

                                                       gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                                              >  1:788770/1‑100 (MQ=255)

                                                        aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt                                             <  1:242584/100‑1 (MQ=255)

                                                        aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCAGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGAATCAGACTTAtattagtatt                                             >  1:2988794/1‑100 (MQ=38)

                                                          cTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGTCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattcg                                           <  1:111091/100‑1 (MQ=255)

                                                           tGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATattcggattcgt                                          <  2:2971227/100‑1 (MQ=255)

                                                              tttGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAAt                                       <  1:2067831/100‑1 (MQ=255)

                                                                 gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCCCATCCGACTTATATTCGTATTCGTAATAg                                     >  2:1934077/1‑99 (MQ=255)

                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                   >  2:2660086/1‑100 (MQ=255)

                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                   >  1:233880/1‑100 (MQ=255)

                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                   >  1:1334340/1‑100 (MQ=255)

                                                                   ttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCa                                  >  2:1073472/1‑100 (MQ=255)

                                                                    tgcCGGACGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAt                                 >  1:1583927/1‑100 (MQ=255)

                                                                    ggccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCCGGCGTAGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                    <  2:519279‑M1/66‑1 (MQ=255)

                                                                    ggccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGAATCCGACTTATATTCGTATTAGTAATAGCCAt                                 <  1:946283‑M1/69‑1 (MQ=255)

                                                                     gccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATACAGGCGTCATTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                <  1:920666‑M1/70‑1 (MQ=255)

                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                >  2:1411916/1‑100 (MQ=255)

                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAAGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                >  1:27560/1‑100 (MQ=255)

                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAAt                              <  1:1478003‑M1/72‑1 (MQ=255)

                                                                         gATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCTGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATcc                            <  1:2863529/100‑1 (MQ=255)

                                                                           tGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTg                          <  2:2166176/100‑1 (MQ=255)

                                                                           tGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTg                          <  2:2465518/100‑1 (MQ=255)

                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGa                         >  1:1562285/1‑100 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCATGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCCTTATATCCATa                                >  2:421033/1‑92 (MQ=38)

                                                                             cggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGAt                        >  2:1362626/1‑100 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCACATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGAt                        >  2:643784/1‑100 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTCTTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       >  2:340297/1‑100 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       <  1:1366909/100‑1 (MQ=255)

                                                                               gcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAc                      >  2:45304/1‑100 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcg                     <  1:1225606/100‑1 (MQ=255)

                                                                                cgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcg                     <  1:1097372/100‑1 (MQ=255)

                                                                                  tGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcgcg                   >  2:1936501/1‑100 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACgcgc                  >  1:1671614/1‑100 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTg                <  1:251724/100‑1 (MQ=255)

                                                                                      cGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCATGATACGCGCTg                >  1:3032872/1‑99 (MQ=255)

                                                                                       gCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGgc              >  1:10642/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACgcgccagcg             >  1:1757286/1‑95 (MQ=255)

                                                                                        ccTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGgcg             >  1:71726/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCAACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGgcg             >  1:861590/1‑100 (MQ=255)

                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg          <  2:773965/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg          >  1:2116506/1‑100 (MQ=255)

                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg          >  2:697124/1‑100 (MQ=255)

                                                                                            atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggc         >  2:2573517‑M1/8‑100 (MQ=255)

                                                                                            atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggc         <  2:2884748‑M1/93‑1 (MQ=255)

                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        >  1:1207‑M1/7‑100 (MQ=255)

                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        >  1:2794429‑M1/7‑100 (MQ=255)

                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        >  1:1964028‑M1/7‑100 (MQ=255)

                                                                                              ccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGcggcgg       >  2:946277‑M1/6‑100 (MQ=255)

                                                                                               cggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGa      >  2:2995480‑M1/5‑100 (MQ=255)

                                                                                               cggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGa      <  2:1726023‑M1/96‑1 (MQ=255)

                                                                                                ggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGaa     <  1:83565‑M1/97‑1 (MQ=255)

                                                                                                ggcCTACGGGGCGGTGCGAATGCAGGCGTAGTTATTTAGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGaa     <  2:1744416‑M1/97‑1 (MQ=255)

                                                                                                  ccTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATTCGACTTATATTCGTATTCGTAATAACCATAATAATGATACGCGAAAGCGCGGAGGAAGa   >  1:1293489/1‑100 (MQ=255)

                                                                                                   cTACGGGGCGGTGCGAATGCAGGCGTAGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGCAAGAt  >  2:123430/1‑100 (MQ=255)

                                                                                                   cTACGGGGCGGTGCGAATGCAGACGTCGTTATTTCGCATCAGACTTATATTCGTATTAGTAATAACCATAATCCTGATACGCGCTAGCGCGGCGGaaaa   >  2:123297/1‑97 (MQ=255)

GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGAT  >  NC_000913/2133363‑2133561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.