New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2662541NA (NA)14 (0.140) 7/164 NT NA noncoding (233/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 = 2662574 NA (NA)noncoding (266/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 130 total aligned reads displayed.

ACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCAC  >  NC_000913/2662485‑2662671
                                                                                         |                                                                                                 
aCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt                                                                                         >  1:2971444/1‑100 (MQ=11)
aCGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt                                                                                         <  1:1884113/100‑1 (MQ=11)
     tGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                                                    <  2:546337/100‑1 (MQ=35)
     tGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                                                    <  1:2467726/100‑1 (MQ=35)
      gTCGGATGCGGCGTGAACGTCTTATCCGACCTACGGTTTTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                                                                   <  1:185632/100‑1 (MQ=255)
      gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                                                                   >  1:917096/1‑100 (MQ=38)
      gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                                                    >  1:1917110/1‑99 (MQ=35)
       tCGGATGCGGTGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc                                                                                  <  1:1458416/100‑1 (MQ=255)
       tCGGATGCGGCGTGTACGCTTTATCTGTTCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc                                                                                  <  1:2129041/100‑1 (MQ=14)
        cgtaTGCAGCGTTAACGCCTTATCCGACTTACGGTTCTGTGCACTGTAGGCCTGATAAGACGCATTACGCGTCTCATCAGGCAACGGCTGGTATTCg                                                                                    <  2:934034/94‑1 (MQ=11)
        cGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGcc                                                                                 <  1:316106/100‑1 (MQ=40)
        cGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGAAGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGcc                                                                                 >  1:65350/1‑100 (MQ=255)
         ggATGCGGCGTGAACGCCTTATCCGTCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                                                <  2:1163698/100‑1 (MQ=255)
         ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                                                <  2:329793/100‑1 (MQ=40)
         ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTAGCATAAGGCAACGGCTGTTATTCGGCCt                                                                                >  1:1040207/1‑100 (MQ=255)
           aTGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg                                                                              <  2:680527/100‑1 (MQ=255)
            ngcggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt                                                                               >  2:2883794/2‑98 (MQ=255)
              cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                                                           <  2:2826445/100‑1 (MQ=255)
              cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                                                           >  1:2831460/1‑100 (MQ=255)
              cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                                                           <  1:1123132/100‑1 (MQ=255)
                gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                                                         <  1:183525/100‑1 (MQ=255)
                  gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                                                       <  1:1286235/100‑1 (MQ=255)
                   tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                                                      <  2:2882760/100‑1 (MQ=255)
                   tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                                                      <  1:2608334/100‑1 (MQ=255)
                   tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                                                      <  2:2040657/100‑1 (MQ=255)
                   tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                                                      >  2:1166585/1‑100 (MQ=255)
                     aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                                                    <  1:158352/100‑1 (MQ=255)
                     aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                                                    <  2:3020104/100‑1 (MQ=255)
                       cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                                                                  <  2:2328357/100‑1 (MQ=255)
                        gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                                                                 <  1:364313/100‑1 (MQ=255)
                         ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                                                >  2:2495997/1‑100 (MQ=255)
                         ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                                                >  1:105527/1‑100 (MQ=255)
                         ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                                                >  1:480748/1‑100 (MQ=255)
                          cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                                               <  1:1269689/100‑1 (MQ=255)
                          cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                                               <  2:1128789/100‑1 (MQ=255)
                           ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                                                              >  1:2525820/1‑100 (MQ=255)
                            tATCCGACCTACGTTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                                                              <  2:2574397/99‑1 (MQ=255)
                            tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgctg                                                             <  2:136208/100‑1 (MQ=255)
                            tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGATACCTTTATTctgctg                                                             >  2:2994441/1‑100 (MQ=255)
                               ccGACTTGCGGTTCTGTTCACTGTAGGGCTGATAATACGAATTACTCGTCGAATCAGGCAACGGCGGTTATTCGGCCTTGTTAGATTTATTctgctg                                                             <  2:1323526/97‑1 (MQ=18)
                               ccGACCTACGGTTCTGTTCACTGTAGGTCTGATAAGATGCTTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                                                          <  1:1721692/100‑1 (MQ=255)
                                ggACCTACGGTTGTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                                                              <  2:2794385/94‑1 (MQ=255)
                                   ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                                                      <  2:1517144/100‑1 (MQ=255)
                                   ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                                                      <  2:1330354/100‑1 (MQ=255)
                                   ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGATGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                                                      >  2:262724/1‑100 (MQ=255)
                                    cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                                                      >  2:1824921/1‑99 (MQ=255)
                                    cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg                                                     <  1:606693/100‑1 (MQ=255)
                                    cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg                                                     >  2:437305/1‑100 (MQ=255)
                                     tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                                                    <  2:2526465/100‑1 (MQ=255)
                                      aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaa                                                   >  2:602987/1‑100 (MQ=255)
                                       cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg                                                  <  2:1593646/100‑1 (MQ=255)
                                         gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc                                                <  2:790584/100‑1 (MQ=255)
                                           tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg                                              <  1:1569038/100‑1 (MQ=255)
                                            cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa                                             >  2:930496/1‑100 (MQ=255)
                                             tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa                                            >  1:28077/1‑100 (MQ=255)
                                              gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt                                           <  2:2702556/100‑1 (MQ=255)
                                              gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGATCAATAGAAGCCAGAAt                                           >  1:59542/1‑100 (MQ=255)
                                                 cACTGTAGGCCTGATAAGACGCATTACGCGTTGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc                                        <  1:1312401/100‑1 (MQ=255)
                                                 cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc                                        >  1:3318/1‑100 (MQ=255)
                                                 cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc                                        >  2:1087649/1‑100 (MQ=255)
                                                     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc                                    >  2:1077180/1‑100 (MQ=255)
                                                     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc                                    <  1:862528/100‑1 (MQ=255)
                                                       aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg                                  >  1:182095/1‑100 (MQ=255)
                                                         gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa                                <  1:437308/100‑1 (MQ=255)
                                                         gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa                                >  1:107866/1‑100 (MQ=255)
                                                         gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa                                >  2:1901865/1‑100 (MQ=255)
                                                         gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGa                                <  1:823661/100‑1 (MQ=255)
                                                            tGATAAGACGCATTACGAGTCGCATCAGGCAACAGCAGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCACGCGCAGGatat                             >  2:1791836/1‑100 (MQ=38)
                                                             gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATAtt                            >  2:1018118/1‑100 (MQ=255)
                                                              aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc                           <  1:1542612/100‑1 (MQ=255)
                                                              aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc                           >  2:2222405/1‑100 (MQ=255)
                                                               tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCa                          >  2:333618/1‑100 (MQ=255)
                                                                 aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc                        <  2:2680743/100‑1 (MQ=255)
                                                                 aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc                        >  1:1227364/1‑100 (MQ=255)
                                                                  gACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACt                       >  1:2619498/1‑100 (MQ=255)
                                                                  gACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACt                       >  1:2634394/1‑100 (MQ=255)
                                                                   aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTc                      >  2:1454053/1‑100 (MQ=255)
                                                                    cGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTcc                     >  1:1035940/1‑100 (MQ=255)
                                                                     ggaTTACGCGGCGCATCAGGCAACGGCTGTTATGCGGCCTTGTTACCTGTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc                        <  2:2988179/94‑1 (MQ=39)
                                                                     gCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt                    <  2:1192910/100‑1 (MQ=255)
                                                                      cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt                    <  1:688231/99‑1 (MQ=255)
                                                                       aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTgg                  >  1:586805/1‑100 (MQ=255)
                                                                        ttACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGc                 <  1:973413/100‑1 (MQ=255)
                                                                          aCGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt               >  1:743310/1‑100 (MQ=255)
                                                                             cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTcc            >  2:1361100/1‑100 (MQ=255)
                                                                                cGCATCAGGCAACGGCTGTTATTCTGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAATTCCTGGCTTTCCggg         <  2:1636182/100‑1 (MQ=255)
                                                                                cGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCggg         <  1:2982197/100‑1 (MQ=255)
                                                                                 gCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgc        <  2:2229543/100‑1 (MQ=255)
                                                                                 gCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgc        >  1:2007956/1‑100 (MQ=255)
                                                                                  cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCggg         <  1:2666682/98‑1 (MQ=255)
                                                                                  cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcg       <  1:2274410/100‑1 (MQ=255)
                                                                                  cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcg       <  2:917385/100‑1 (MQ=255)
                                                                                  cATCAGGCAACGGCTGTTATTCAGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcg       >  2:582824/1‑100 (MQ=255)
                                                                                  cATCAGGCAACGACTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTcc            >  2:808443/1‑95 (MQ=255)
                                                                                   aTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcgc      >  2:1602760/1‑100 (MQ=255)
                                                                                    tCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcgcg     <  2:2981740/100‑1 (MQ=255)
                                                                                     cAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGgcgcgc    <  2:1123875/100‑1 (MQ=255)
                                                                                     cAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTACTGGCTTTACGGgcg       >  1:529017/1‑97 (MQ=255)
                                                                                       ggCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCAc  >  1:665063/1‑100 (MQ=255)
                                                                                       gccAACGGCTGTTATTCGACGTTGGTACCTTTATTCTGCTCCGCCATAGAACCCAAAATCCCGCGCAGGCTATTGACCTCCCCGCTTGCCGGGCGCCCa   >  2:1333615/3‑99 (MQ=255)
                                                                                         |                                                                                                 
ACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTTTCCGGGCGCGCAC  >  NC_000913/2662485‑2662671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.