New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3470738 =	NA (NA)	9 (0.090)	5/168	NT	NA	coding (592/1185 nt)	tufA	translation elongation factor EF‑Tu 1
	?	NC_000913	3470767 =	NA (NA)					coding (563/1185 nt)	tufA	translation elongation factor EF‑Tu 1

GGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGT  >  NC_000913/3470670‑3470828                                                                                                  |                                                              ggAGAATATGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                             <  2:884742/100‑1 (MQ=18)   agaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                            <  1:2012750/99‑1 (MQ=32)   agaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGc                                                           <  1:1820434/100‑1 (MQ=33)         cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                     <  1:2947699/100‑1 (MQ=33)         cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                     <  1:1565757/100‑1 (MQ=32)         cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                     <  1:1454949/100‑1 (MQ=33)          gTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAc                                                    >  1:2973519/1‑100 (MQ=33)           tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAGGCCAGCCAGTTCCAGGATTTTCGCTTCTCatt                                                   >  1:2260987/1‑98 (MQ=255)            cTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAAAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                  >  1:698601/1‑100 (MQ=18)             ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActct                                                 <  2:343222/100‑1 (MQ=33)                gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                              >  2:96139/1‑100 (MQ=33)                gATCGGCAGCAGGAACGGCGTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCGGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                              <  2:202568/100‑1 (MQ=16)                  tCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTc                                            <  2:2170468/100‑1 (MQ=33)                  tCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTc                                            <  2:2170449/100‑1 (MQ=33)                  tCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTc                                            <  2:1385773/100‑1 (MQ=33)                   cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                           >  1:2769264/1‑100 (MQ=33)                    ggCAGCAGGAACGGCTTGTTAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                          <  1:1018369/100‑1 (MQ=17)                    ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCTGAATATAAGAATCCAGGAAGCAAGCAAGTTCCAGGATATTCGCTTCACACTCTGCGTCg                                           >  1:2360989/1‑99 (MQ=11)                    ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                          >  1:960748/1‑100 (MQ=33)                    ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                          >  1:1766729/1‑100 (MQ=33)                    ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAATTCCAAGATTTTCGCTTCCCACTCTGCGTCg                                           >  1:1045106/1‑99 (MQ=12)                     gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                         >  1:2458805/1‑100 (MQ=33)                     gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                         <  2:1704585/100‑1 (MQ=33)                      cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCt                                        <  2:2036850/100‑1 (MQ=33)                       agcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCtt                                       >  2:637475/1‑100 (MQ=33)                        ttccgatctgCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                      <  1:148997/91‑1 (MQ=255)                        ttccgatctgCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                      <  1:633395/91‑1 (MQ=255)                        gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                      >  2:240243/1‑100 (MQ=33)                        gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                      >  1:2765998/1‑100 (MQ=33)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                   >  1:2355450/1‑100 (MQ=33)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                   >  1:1353808/1‑100 (MQ=32)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                   <  1:1190093/100‑1 (MQ=32)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCACACTCTGCGTCGCCTTCCAg                                   >  1:102115/1‑100 (MQ=18)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTCCCCACTCTGCGTCGCCTTCCAg                                   >  2:2331488/1‑100 (MQ=18)                           ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATACAAGAATCCAGGAAGCCAGCGAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                   <  2:1645257/100‑1 (MQ=12)                            gAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgc                                  >  1:802480/1‑100 (MQ=33)                            gAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgc                                  <  2:638311/100‑1 (MQ=33)                            gAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgc                                  <  1:2496517/100‑1 (MQ=32)                              aCGGCTTGTCAATCGCACGCTCTGGTTCCGGACTATAAGCATTCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                <  2:2132415/100‑1 (MQ=255)                                ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                              <  1:2018228/100‑1 (MQ=32)                                 gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcagatcggaa                             >  2:633391/1‑91 (MQ=255)                                 gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcagatcggaa                             >  2:148995/1‑91 (MQ=255)                                 gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                             >  2:2963429/1‑100 (MQ=33)                                 gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                             >  1:1495766/1‑100 (MQ=33)                                  cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                            >  1:685810/1‑100 (MQ=33)                                  cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                            <  2:2241043/100‑1 (MQ=33)                                  cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                            <  1:2038080/100‑1 (MQ=33)                                   ttGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCa                           <  1:957564/100‑1 (MQ=32)                                   ttGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCa                           <  1:957589/100‑1 (MQ=32)                                     ntCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                         >  1:221221/2‑100 (MQ=17)                                     gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                         <  2:993323/100‑1 (MQ=33)                                     gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                         >  1:1491786/1‑100 (MQ=33)                                     gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                         >  2:1145899/1‑100 (MQ=33)                                     gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGGTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCAAGCGCTTTCaga                         >  2:984477/1‑100 (MQ=12)                                      tCAATCTTACGCTCTGTTTCCGTAATATAATAATCCATTAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                        <  1:234254/100‑1 (MQ=11)                                      tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCTGCCAGTTCAAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                        <  1:115056/100‑1 (MQ=12)                                      tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                        <  2:39771/100‑1 (MQ=32)                                       caatatcACGCTCTGGTTCCGGAATATAAAAATCCAGGAAGCCACCCAGTTCCAGAATTTTCGCTTCCCACTTTGAGTCGCCTTCCAGCGCTTTCAGAGc                       >  2:211593/7‑100 (MQ=11)                                       cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCATGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                       <  2:2796506/100‑1 (MQ=18)                                       cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                       <  1:2279655/100‑1 (MQ=33)                                       cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                       <  1:2960436/100‑1 (MQ=33)                                       cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                       <  1:1125168/100‑1 (MQ=32)                                        aaTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCa                      >  2:2167442/1‑100 (MQ=33)                                        aaTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCa                      <  2:855163/100‑1 (MQ=33)                                        aaTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCa                      >  2:1283120/1‑100 (MQ=33)                                         aTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                     <  1:31846/100‑1 (MQ=32)                                         aTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                     <  2:324653/100‑1 (MQ=33)                                          tCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAgn                    <  2:1503027/100‑2 (MQ=18)                                           cGCACGCTCTGGTTCCGGAATATAAGATTCCAGGAAGCCAGCTAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGaa                   <  1:76301/100‑1 (MQ=12)                                            gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGTCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                  <  1:1516326/100‑1 (MQ=17)                                            gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTGGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                  >  2:1936678/1‑100 (MQ=18)                                             cACGCTCTGGTTCAGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAcc                 <  2:2078150/100‑1 (MQ=18)                                               cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCac               >  2:2286435/1‑100 (MQ=33)                                                gCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg              <  2:1954365/100‑1 (MQ=33)                                                   ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCATTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacga             <  2:82598/98‑1 (MQ=17)                                                   ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac           <  1:2716446/100‑1 (MQ=33)                                                   ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac           <  1:116557/100‑1 (MQ=33)                                                    tGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacg          <  2:2315241/100‑1 (MQ=33)                                                      gTTCCGGAATATAAGAATCCAGGAAGCCAGACAGTTCCAGGATTTTCGCGTTCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACcacgcacgct        >  2:1428385/1‑98 (MQ=11)                                                       ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTTCATGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc       <  1:9230/100‑1 (MQ=12)                                                       ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc       <  1:181233/100‑1 (MQ=33)                                                          cGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGa    >  1:26980/1‑100 (MQ=33)                                                           tgAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg   <  1:599502/99‑1 (MQ=17)                                                           ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg   <  2:802476/100‑1 (MQ=32)                                                           ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg   <  1:1457750/100‑1 (MQ=33)                                                           ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGATTTCAGAGCAGAACCACGAACGATCGGAg   >  1:1071656/1‑100 (MQ=18)                                                            gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgt  <  1:1396914/100‑1 (MQ=33)                                                            gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgt  >  2:2612922/1‑100 (MQ=32)                                                            gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAga  >  2:599498/1‑99 (MQ=17)                                                                                                  |                                                              GGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGT  >  NC_000913/3470670‑3470828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.