New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3650712 =NA (NA)8 (0.080) 5/164 NT NA noncoding (1/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3650744 = NA (NA)noncoding (33/100 nt) RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP262 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 124 total aligned reads displayed.

GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843
                                                                                                   |                                                                                                   
ggTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     <  1:369225/100‑1 (MQ=255)
cctgatgcgctacgcctgtcaggcctacaaataacatactattcatcgaattttcataactttgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     >  1:2601039‑M1/68‑100 (MQ=255)
 gTAAGCGCCTGAAATAAAGCGGCGCTATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    <  2:2197416/100‑1 (MQ=255)
   aaGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTAc                                                                                                  <  2:1236401/100‑1 (MQ=255)
    aGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCACATCTTATCCGACCTACa                                                                                                 >  1:2651960/1‑100 (MQ=255)
       gcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAg                                                                                              >  1:363175/1‑100 (MQ=255)
       gcCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAg                                                                                              >  1:2503200/1‑100 (MQ=255)
         cTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGtt                                                                                            <  2:1576281/100‑1 (MQ=255)
          tGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTa                                                                                           <  2:145585/100‑1 (MQ=255)
           gAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          <  2:207540/100‑1 (MQ=255)
           gAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTAt                                                                                          <  2:2976437/100‑1 (MQ=255)
             aaTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGa                                                                                        >  1:2644338/1‑100 (MQ=255)
             aaTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGa                                                                                        >  1:1575570/1‑100 (MQ=255)
              aTAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGaa                                                                                       >  1:658641/1‑100 (MQ=255)
               tAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGaa                                                                                       <  1:2696767/99‑1 (MQ=255)
                 aaGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAAt                                                                                    >  1:2794026/1‑100 (MQ=255)
                  aGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAAtt                                                                                   <  2:1640243/100‑1 (MQ=255)
                    cggcgATATCCCCCTCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCg                                                                                 <  1:581827/100‑1 (MQ=255)
                      gcgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGAt                                                                               <  2:2383295/100‑1 (MQ=255)
                       cgATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATg                                                                              <  1:508928/100‑1 (MQ=255)
                         atatCCTCCCCACAGGTTGTTAGAAAATTGCGCTTTATTTATGTCGGATGCGAAGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGaa                                                                            <  1:2786952/100‑1 (MQ=255)
                         atatCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGaa                                                                            <  2:829055/100‑1 (MQ=255)
                            tCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATTAAAATTCGATGAATAg                                                                         >  2:1001870/1‑100 (MQ=255)
                            tCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAg                                                                         >  1:802130/1‑100 (MQ=255)
                               cccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTAt                                                                      <  2:2201424/100‑1 (MQ=255)
                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                                                     >  1:1902754/1‑100 (MQ=255)
                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                                                     <  1:2869767/100‑1 (MQ=255)
                                ccccACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATg                                                                     >  1:2795980/1‑100 (MQ=255)
                                     caGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTAtt                                                                >  2:1540793/1‑100 (MQ=255)
                                     caGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTAtt                                                                <  2:2031777/100‑1 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGTATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             <  2:1486721/100‑1 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             >  1:831467/1‑100 (MQ=255)
                                        gttgttAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGt                                                             >  2:2099302/1‑100 (MQ=255)
                                          tgttAGAAGAGTGCCCTTTATTTATGTCGGTTTCTACGCTGGCGCTTCTTATCCGACCTACAAAGTTATTAAAATTCGATGAATAg                                                                         <  2:1351156/86‑1 (MQ=255)
                                           gttAGAAAAGTGCGCTTTATTTATCTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGGTATTTGTAgg                                                          >  2:16573/1‑100 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACTCTGGCGCGTCTTATCCTACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        <  2:1019733/100‑1 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGTCCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        <  2:1976360/100‑1 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        <  2:1459805/100‑1 (MQ=255)
                                             tAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGcc                                                        <  1:2290117/100‑1 (MQ=255)
                                              aGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCATATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCt                                                       >  2:569399/1‑100 (MQ=255)
                                                aaaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTg                                                      <  1:2146991/99‑1 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTTGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    <  1:1251825/100‑1 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAATTTCTGAAAACTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    >  2:2131194/1‑100 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    <  1:1009892/100‑1 (MQ=255)
                                                 aaaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGAc                                                    <  1:1120995/100‑1 (MQ=255)
                                                  aaGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACa                                                   <  1:2300723/100‑1 (MQ=255)
                                                   aGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAg                                                  <  1:1347820/100‑1 (MQ=255)
                                                    gTGCGCTTTATTTATGTCGGATGCGACGTTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAgg                                                 <  1:1179433/100‑1 (MQ=255)
                                                    gTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAgg                                                 <  2:396942/100‑1 (MQ=255)
                                                    gTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAgg                                                 <  2:1701645/100‑1 (MQ=255)
                                                     tGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGc                                                <  2:2976506/100‑1 (MQ=255)
                                                        gcTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATATTATGTTATTTATAGGCCTGACAGGCGTa                                             >  1:2015020/1‑100 (MQ=255)
                                                          tttatttaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc                                           <  1:1052773/100‑1 (MQ=255)
                                                          tttatttaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgc                                           <  2:536071/100‑1 (MQ=255)
                                                           ttatttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAgcg                                          <  2:2667571/100‑1 (MQ=255)
                                                             atttatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCa                                        <  2:1744816/100‑1 (MQ=255)
                                                                tatGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCa                                     <  2:437325/100‑1 (MQ=255)
                                                                 atGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAg                                    <  1:1830297/100‑1 (MQ=255)
                                                                 atGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAg                                    <  1:1943282/100‑1 (MQ=255)
                                                                   gtcggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  >  1:1171693‑M2/33‑100 (MQ=255)
                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  >  2:2676463‑M1/1‑100 (MQ=255)
                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  <  1:745802‑M1/100‑1 (MQ=255)
                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGc                                  >  1:374110‑M1/1‑100 (MQ=255)
                                                                    tcggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCg                                 >  2:103636‑M2/32‑100 (MQ=255)
                                                                      ggataagacgcgccagcgtcttatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               >  1:33942‑M2/30‑100 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               >  2:2322755‑M2/30‑100 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               >  1:2291168‑M2/30‑100 (MQ=255)
                                                                      ggataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCACATCAGGCGAt                               >  1:1763119‑M2/30‑100 (MQ=255)
                                                                      GGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAt                               <  1:1460353‑M1/100‑1 (MQ=255)
                                                                       gataagacgcgccagcgtcgcatccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtt                              >  1:1755657‑M2/29‑100 (MQ=255)
                                                                       GATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtt                              <  1:1091018‑M1/100‑1 (MQ=255)
                                                                       GATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGAtt                              <  1:1190955‑M1/100‑1 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          >  1:1111152/1‑100 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGc                          >  1:1986165/1‑100 (MQ=255)
                                                                             aCGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTa                        <  1:1871788/100‑1 (MQ=255)
                                                                               gCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTAt                       <  1:915768/99‑1 (MQ=255)
                                                                                    ctcgTCTTATCCGTCCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTac                   <  1:1001876/96‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                 <  2:710471/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTacac                 <  1:991783/100‑1 (MQ=255)
                                                                                     gcgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTatac                 >  2:480939/1‑99 (MQ=255)
                                                                                      cgTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAg               <  1:1211671/100‑1 (MQ=255)
                                                                                       gTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGACATGACAGGAGTAGCGCATCAGGCGATTTTGCTATTTACACAGt              >  1:2575697/1‑100 (MQ=255)
                                                                                        tCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGt              >  2:2921262/1‑99 (MQ=255)
                                                                                        tCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTa             <  2:1111142/100‑1 (MQ=255)
                                                                                        tCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTa             >  2:2952208/1‑100 (MQ=255)
                                                                                         cTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTAc            >  1:1312514/1‑100 (MQ=255)
                                                                                         cTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTAc            >  1:1569408/1‑100 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         >  1:2605384‑M2/8‑100 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         >  2:1541437‑M2/8‑100 (MQ=255)
                                                                                            atccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAAGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTcc         <  2:1653331‑M2/93‑1 (MQ=255)
                                                                                             tccgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTccc        <  2:2641138‑M2/94‑1 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      <  1:2095226‑M2/96‑1 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  2:1295408‑M2/5‑100 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      <  1:1521713‑M2/96‑1 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGAGAATAAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  1:994858‑M2/5‑100 (MQ=255)
                                                                                               cgacCTACAAAGTTATGAAAAATAGATGAATAGTATGTTATTTGTAGGGTTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTg      >  2:1213624‑M2/5‑100 (MQ=255)
                                                                                                gacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGc     <  2:2777357‑M2/97‑1 (MQ=255)
                                                                                                gacCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGc     >  1:641272‑M2/4‑100 (MQ=255)
                                                                                                 acCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCg    <  2:345910‑M2/98‑1 (MQ=255)
                                                                                                   cTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTg  >  1:2373417/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGTAAGCGCCTGAAATAAAGCGGCGATATCCCCCCCACAGGTTGTTAGAAAAGTGCGCTTTATTTATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACAAAGTTATGAAAATTCGATGAATAGTATGTTATTTGTAGGCCTGACAGGCGTAGCGCATCAGGCGATTTTGCTATTTACACAGTACTCCCTGCGTG  >  NC_000913/3650645‑3650843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.