New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4235376 =NA (NA)9 (0.100) 6/156 NT NA coding (1619/1650 nt) pgi glucosephosphate isomerase
?NC_000913 4235411 = NA (NA)intergenic (+4/‑495) pgi/yjbE glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein

Only 100 of 157 total aligned reads displayed.

CGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG  >  NC_000913/4235312‑4235509
                                                                                                   |                                                                                                  
cgtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcat                                                                                                    >  2:1412831‑M1/65‑100 (MQ=255)
 gtcgcatcaggcatcggttgccggatgcggcgtgaacgccttatccggcctacatatcgacgaTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                   >  1:172714‑M1/64‑100 (MQ=255)
    ttCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGGGGCGCGGTTAATCAtcgtc                                                                                                <  1:266989/100‑1 (MQ=255)
     tCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAACGTGGCGCGGTTAATCAtcgtcg                                                                                               >  1:524622/1‑100 (MQ=255)
      ctggaagagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCGCGACCAAGAGTCTGATTAACCGCTATAAAGCGTTGCGCGGTTAATCATCGTCGa                                                                                              >  2:1765142/6‑100 (MQ=255)
      cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa                                                                                              >  1:53155/1‑100 (MQ=255)
      cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa                                                                                              >  2:275623/1‑100 (MQ=255)
        gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                            <  1:1073238/100‑1 (MQ=255)
            gagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATGTGTa                                                                                        <  1:405409/100‑1 (MQ=255)
               cTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                                                      <  2:2199309/99‑1 (MQ=255)
                tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                                                    <  1:1544199/100‑1 (MQ=255)
                tGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAACGTGGCGCGGTTAATCATCGTCGATATGTAGGcc                                                                                    >  1:331044/1‑100 (MQ=255)
                       tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGACGCGGTTAATCATCGTCGATATGTAGGCCGGATAAg                                                                             >  1:2864588/1‑100 (MQ=255)
                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                            <  2:1014346/100‑1 (MQ=255)
                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                            <  1:11597/100‑1 (MQ=255)
                        gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                            >  1:1080256/1‑100 (MQ=255)
                         atAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgat                                                                           >  2:679733/1‑98 (MQ=255)
                          tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                          >  1:2873605/1‑100 (MQ=255)
                          tAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCg                                                                          >  1:684934/1‑100 (MQ=255)
                           aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                         >  2:2188482/1‑100 (MQ=255)
                           aaaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                         <  2:497239/100‑1 (MQ=255)
                              gAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTAGCGCGGATAATCATAGTCGATATGTAGGCCGGATAAGGCGTTCa                                                                      >  1:792311/1‑100 (MQ=255)
                                aaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTTGCGCGGTTAATCATCGTCGATATGTAAGCCGGATAAGGCGTTCAcg                                                                    >  1:1127116/1‑100 (MQ=255)
                                  tCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgcc                                                                  <  1:2848692/100‑1 (MQ=255)
                                          cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                          <  1:13398/100‑1 (MQ=255)
                                          cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                          <  1:2399217/100‑1 (MQ=255)
                                          cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                           >  1:1213371/1‑99 (MQ=255)
                                          cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCAGTTAATCATCGTCGAAATGTAAACGGGAGAAGGCGTTCACGCCGCATc                                                             >  2:2270012/1‑97 (MQ=255)
                                           atgATAGCTCGACCAATGGTCTTATTAATCGCTATAAAGCTTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                         <  1:1653219/98‑1 (MQ=38)
                                           aCGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATGCGGCGTGAACGCCTTATCCgg                                                          <  2:566543/99‑1 (MQ=37)
                                           aCGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACACCGCATCCGGc                                                         >  1:2174574/1‑100 (MQ=255)
                                            cGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATGCGTCGTGAACGCCTTATCCGGcc                                                        <  2:351448/100‑2 (MQ=37)
                                            cGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                        <  2:1184452/100‑2 (MQ=37)
                                               tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                     <  2:1725593/100‑1 (MQ=255)
                                               tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                     <  1:2714562/100‑1 (MQ=255)
                                               tAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAcc                                                     <  2:762496/100‑1 (MQ=255)
                                                 gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAAACCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                   >  1:87103/1‑100 (MQ=255)
                                                  cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                  >  2:2234950/1‑100 (MQ=255)
                                                   tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                 <  1:2456048/100‑1 (MQ=255)
                                                   tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                 >  2:261736/1‑100 (MQ=255)
                                                     gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCTTTCACGCCGCATCCGGCAACCGATg                                                 >  1:2717222/1‑98 (MQ=255)
                                                      aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                              <  1:1021229/100‑1 (MQ=255)
                                                      aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                              <  1:2027673/100‑1 (MQ=255)
                                                          aTGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATg                                          <  2:860466/100‑1 (MQ=255)
                                                              tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                      <  1:1653567/100‑1 (MQ=255)
                                                              tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                      <  2:2038125/100‑1 (MQ=255)
                                                               cTGATTAACCGCTATAAAGCGTGGCGCGGATAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                     >  2:902959/1‑100 (MQ=255)
                                                                 gattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                   >  2:2181605‑M2/35‑100 (MQ=255)
                                                                 gattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                   >  1:1580273‑M2/35‑100 (MQ=255)
                                                                 GATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                   <  2:1341305‑M1/100‑1 (MQ=255)
                                                                 GATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                    <  1:2978298‑M1/99‑1 (MQ=255)
                                                                 GATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGACAGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                   <  1:868464‑M1/100‑1 (MQ=255)
                                                                  attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGCTGCGAcgcg                                   >  2:2778425‑M2/34‑99 (MQ=255)
                                                                  attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                  >  1:649722‑M2/34‑100 (MQ=255)
                                                                  attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                  >  1:912839‑M2/34‑100 (MQ=255)
                                                                  ATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGacgcga                                  <  2:1793204‑M1/100‑2 (MQ=255)
                                                                     aaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                               >  2:2611700‑M2/31‑100 (MQ=255)
                                                                     AACCGCTATAAAGCGTGGTGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                               >  1:548726‑M1/1‑100 (MQ=255)
                                                                     AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                               >  1:918688‑M1/1‑100 (MQ=255)
                                                                     AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                               >  2:859901‑M1/1‑100 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             >  2:2978265‑M1/1‑100 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             <  1:1736056‑M1/100‑1 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             >  1:2350191‑M1/1‑100 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             <  1:2985032‑M1/100‑1 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             <  1:205039‑M1/100‑1 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGAGACGCGGTcgcg                             <  1:506659‑M1/100‑1 (MQ=255)
                                                                       CCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGATCACGCCGCATCCGGAAAACGATGCCTGATGCGACGCGGTcgcg                             <  1:84612‑M1/100‑1 (MQ=255)
                                                                         GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                             <  2:1888530‑M1/98‑1 (MQ=255)
                                                                         GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                           >  1:396228‑M1/1‑100 (MQ=255)
                                                                         GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                           >  2:1413439‑M1/1‑100 (MQ=255)
                                                                         GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                           <  1:2396250‑M1/100‑1 (MQ=255)
                                                                          CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                          >  2:2901043‑M1/1‑100 (MQ=255)
                                                                           tataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCtt                         <  2:2745044/100‑1 (MQ=255)
                                                                            agaaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGAAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                        <  2:2400802/98‑1 (MQ=255)
                                                                              aaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                      <  1:2632378/100‑1 (MQ=255)
                                                                              aaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                      <  2:1547799/100‑1 (MQ=255)
                                                                              aaaGCGTGGCGCGATTAATCATCGTCGATATGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                      >  2:1874164/1‑100 (MQ=255)
                                                                                 gCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                   <  1:606592/100‑1 (MQ=255)
                                                                                 gCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAgg                   <  1:1793225/100‑1 (MQ=21)
                                                                                 gCGTGGAGTGGTTAATTTTCGTTTATTTGTTGGTCGGATAAGGCGTTCTCGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                   <  1:1966489/100‑1 (MQ=17)
                                                                                  cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                   <  1:2653853/99‑1 (MQ=255)
                                                                                  cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGc                  <  1:1309164/100‑1 (MQ=21)
                                                                                   gttgcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGATCGCGTCTTATCAGGcc                 >  2:1292019/4‑100 (MQ=255)
                                                                                   gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                 >  2:2807894/1‑100 (MQ=255)
                                                                                   gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                 <  1:1313218/100‑1 (MQ=255)
                                                                                    tggggcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                      <  2:637204‑M2/79‑1 (MQ=255)
                                                                                      gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc              >  2:1136951/1‑100 (MQ=255)
                                                                                       cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACTCGGTCGCGTCTTATCAGGCCTACa             >  1:1011925/1‑100 (MQ=255)
                                                                                        gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg            <  2:1129734‑M2/89‑1 (MQ=255)
                                                                                          ggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt          >  2:210678‑M2/10‑100 (MQ=255)
                                                                                           gttaatcaTCGTCGATATGTAGGCCGGATAATGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTc         <  2:624074‑M2/92‑1 (MQ=255)
                                                                                           gttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTc         <  1:175047‑M2/92‑1 (MQ=255)
                                                                                               atcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg     >  1:2649221‑M2/5‑100 (MQ=255)
                                                                                               atcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg     >  1:2337889‑M2/5‑100 (MQ=255)
                                                                                               atcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg     >  2:508548‑M2/5‑100 (MQ=255)
                                                                                                tcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc    <  2:2779322‑M2/97‑1 (MQ=255)
                                                                                                tcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGc    <  1:267122‑M2/97‑1 (MQ=255)
                                                                                                 caTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGTCAACCGATGCCTGATGCGACGCGTTCGCGTCTTATCAGGCCTACAGGTCGATGcc   <  2:809602‑M2/98‑1 (MQ=255)
                                                                                                 caTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc   >  1:2607031‑M2/3‑100 (MQ=255)
                                                                                                   tcgtcgATATGTAGGCCGGATAAGGCGTTCACGTTGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg  <  1:1114663/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
CGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCG  >  NC_000913/4235312‑4235509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.