| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4486252 = | 81 (0.750) | 17 (0.170) | 10/162 | NT | 17.7% | coding (35/1101 nt) | lptF | lipopolysaccharide export ABC permease |
| ? | NC_000913 | 4486291 = | 84 (0.850) | coding (74/1101 nt) | lptF | lipopolysaccharide export ABC permease | |||||
Only 100 of 146 total aligned reads displayed.
GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGG > NC_000913/4486192‑4486389 | ccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 1:526353‑M1/61‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacataagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:2344291‑M1/60‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 2:2338879‑M1/60‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:2640889‑M1/60‑100 (MQ=255) cggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc > 1:1619432‑M1/60‑100 (MQ=255) cGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATTCTCTTCATCTTGCTTTTGAtct < 2:599715/100‑1 (MQ=255) gaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 2:2080906‑M1/58‑100 (MQ=255) gaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 2:2811110‑M1/58‑100 (MQ=255) aatatcgtcgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttc > 1:1016540‑M1/57‑100 (MQ=255) aatatcgccgtcaaccgctgcgccgatgatcttcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttc > 1:1064777‑M1/57‑100 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct < 2:2763949/100‑1 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttc < 2:1730206/99‑1 (MQ=255) atatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct > 1:1645406‑M1/56‑100 (MQ=255) tttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttctt < 2:54928/100‑1 (MQ=255) tttttACGGGCGTAGTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttctt < 2:1476769/100‑1 (MQ=255) atcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc > 1:2258426‑M1/54‑100 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg > 2:827685/1‑100 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 2:2151750/100‑1 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 2:480622/100‑1 (MQ=255) cgccgtcaaccgctgcgccgaggatcctcagtaacttttgacagaagaataTCAAAAGCCATCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg > 2:176091‑M1/52‑100 (MQ=255) cgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg > 1:2187334‑M1/52‑100 (MQ=255) tACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGt < 1:2229415/100‑1 (MQ=255) gccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGt > 2:1706483‑M1/51‑100 (MQ=255) cGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCa > 1:1161987/1‑100 (MQ=255) tATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGtt > 1:1160692/1‑100 (MQ=255) aTTTAAAGTGATAATCATAAGATAACTGGTGCGGAAGACGCTCAAAAGCCAGCTGGCGATACTCTTTATCTTGCTTTTGATATTCTTCTGTCAAAAGTTa > 2:2389928/1‑100 (MQ=255) tAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTg < 1:1513809/100‑1 (MQ=255) aaaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGa > 2:2703424/1‑100 (MQ=255) aGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAgg < 1:3033863/100‑1 (MQ=255) gATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATc > 1:580693/1‑100 (MQ=255) aTCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCg > 1:487407/1‑100 (MQ=255) tCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCgg > 1:838937/1‑100 (MQ=255) tCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCgg > 2:2915660/1‑100 (MQ=255) cATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgc > 2:1411255/1‑100 (MQ=255) cATAAGATATCTGGTGCGAGAAACGCACAAAAACCAGGTAGCGATACTCTACATCTTGCTTTTTATCTTGTTCTGTCAAAAGTTAGTGAGGATCCTCAgc > 2:1619970/1‑100 (MQ=255) aTAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcg < 2:1946727/100‑1 (MQ=255) tAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc < 2:2296963/100‑1 (MQ=255) tAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc < 1:1782551/100‑1 (MQ=255) aaGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc > 2:770481/1‑99 (MQ=255) aaGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCCTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCa > 1:1694395/1‑100 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc < 2:2777862/100‑1 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc > 1:1621785/1‑100 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc > 2:2411366/1‑100 (MQ=255) tatCTGGTGCGGGATACGCTCAAAAGCCAGCTTGCTATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCgg < 1:1172298/100‑1 (MQ=255) atCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGt < 1:2084474/100‑1 (MQ=255) tGGTGCGGGAGACGCTCAAAGGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGa > 1:1390070/1‑100 (MQ=255) ggTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGAc > 1:2691996/1‑100 (MQ=255) ggTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGAc < 2:1440464/100‑1 (MQ=255) gTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACg > 1:361549/1‑100 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGAcaga > 1:2866131/1‑97 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc < 1:62976/100‑1 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc < 2:1006689/100‑1 (MQ=255) acagaagaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc > 2:1706483‑M2/51‑100 (MQ=255) cagaagaagatcaaaagcaagatgaagagtatcgccagatggcttttgaTATTCTTCTGTCAAAAGTTACTGAGGATCCTCGGCGCAGCGGTTGACGGCg > 2:176091‑M2/50‑100 (MQ=255) ggAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCAat > 1:1580905/1‑100 (MQ=255) gaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGACGATAtt > 1:1016540‑M2/45‑100 (MQ=255) gaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAAGATCATCGGCGCAGCGGTTGACGGCGATAtt > 1:1064777‑M2/45‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTc > 2:2811110‑M2/44‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTc > 2:2080906‑M2/44‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 1:2159090/1‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc < 1:2224359/100‑1 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc < 2:1942401/100‑1 (MQ=255) agatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 1:1218244‑M2/43‑100 (MQ=255) gatcaaaagcaagatgaagagtatcgcccgctggattttgaTCTTACTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCCGCGGTTGACGGCGATATTCCg > 2:1341074‑M2/42‑100 (MQ=255) gatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg > 2:2338879‑M2/42‑100 (MQ=255) gatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTATGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg > 1:2344291‑M2/42‑100 (MQ=255) gCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTAAAAAGTTAGTGAGGATCCTCGGAGCAGCGGTTGACGGCGATATTCCg > 1:2413758/1‑100 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg < 1:2004104/100‑1 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg > 2:37514/1‑99 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGGCAAAAGTTAGTGATGATCCTCGGCGCAGCGGTTGACGGGGATATTACgg > 2:1843242/1‑100 (MQ=255) atcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 1:526353‑M2/41‑100 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGc < 2:924574‑M1/99‑1 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg > 2:1034395‑M1/1‑100 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg > 1:2678356‑M1/1‑100 (MQ=255) aaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCGAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGa > 2:58021‑M2/38‑100 (MQ=255) GCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCt < 2:371767‑M1/100‑1 (MQ=255) GCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCt < 1:1949571‑M1/100‑1 (MQ=255) cAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTgg < 1:978901/100‑1 (MQ=255) gCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTg > 2:1179022/1‑100 (MQ=255) cTGGCGATTCTCTTCATCTTGCTTTTGATCTTCTTTTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGc < 1:1001031/100‑1 (MQ=255) cGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCtctc < 1:461657/100‑1 (MQ=255) cGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCCGCGCAGCGGTTGACGGCAATATTCCGGCGAATCTGGTGCtctc > 1:1704060/1‑100 (MQ=255) tACTCTTCATCTTGCTTTTGGTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCt > 2:1853551/1‑100 (MQ=255) ctTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTtctc > 1:1172337/1‑100 (MQ=255) ctTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTtctc > 1:943872/1‑100 (MQ=255) ttCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCACGGCGCAGCGGTTGACGGCGATATTCCGACGAATCTGGTGCTCTCCCTTCACg > 2:1678945/1‑100 (MQ=255) tCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTtctccg < 1:2059714/100‑3 (MQ=255) cATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCgg < 2:511049/99‑1 (MQ=255) cTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTg > 1:2213633/1‑100 (MQ=255) cTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTg > 2:936738/1‑100 (MQ=255) cTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTg > 1:1470813/1‑100 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg > 2:1221144/1‑100 (MQ=255) ttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGt > 1:1938560‑M2/7‑100 (MQ=255) ttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGc < 1:1300344‑M2/96‑1 (MQ=255) tgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGcc < 1:1783189‑M2/97‑1 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCg > 2:2982743‑M2/3‑100 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCg > 2:2920291‑M2/3‑100 (MQ=255) aTCTTCTTTTGTCAAAAGTTAGTTAGGGTCCTCGGCGCCGCAATTGACGGCGATATTCCGGGGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCgg < 2:501391‑M2/99‑1 (MQ=255) aTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCgg > 2:2590424‑M2/2‑100 (MQ=255) tcttcttctGTCAAAAGTTAGTTTGGATTCTTGGCGCAGCAGTTGTTGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCgg < 2:2113536/99‑1 (MQ=255) | GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGG > NC_000913/4486192‑4486389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |