New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4602596 =112 (1.040)7 (0.070) 7/168 NT 6.3% coding (263/771 nt) yjjP DUF1212 family inner membrane protein
?NC_000913 4602621 = 101 (0.990)coding (238/771 nt) yjjP DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 138 total aligned reads displayed.

GTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACTT  >  NC_000913/4602522‑4602718
                                                                                                   |                                                                                                 
  aaTGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCa                                                                                                 <  2:815746/100‑1 (MQ=255)
   gctgacaactattaaagatgggcaatgcctgacatcgacacgtaaaaatcacgatcgcggcattaatatgcATGTGCTGGACTTCAGTCACCACATGCat                                                                                                >  1:666277‑M1/72‑100 (MQ=255)
   aTGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCat                                                                                                <  2:2666863/100‑1 (MQ=255)
    ttttttaaTTTGTCTATATCTTTTCTCTTTGTTTTTGTTATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCata                                                                                               <  1:2846092/94‑1 (MQ=255)
    tGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCata                                                                                               >  1:1333464/1‑100 (MQ=255)
    ctgacaactattaaagatgggcaatgcctgacatcgacacgtaaaaatcacgatcgcggcattaatatgcATGTGCTGGACTTCAGTCACCACATGCata                                                                                               >  2:2113851‑M1/71‑100 (MQ=255)
     ggCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCatat                                                                                              >  1:1899746/1‑100 (MQ=255)
     ggCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAAATGATGCTCCGCAAGAATCACAATAAGCTAAAATTCAGTCACAACATGCata                                                                                               >  1:1085495/1‑99 (MQ=255)
      gacaactattaaagatgggcaatgcctgacatcgacacgtaaaaatcacgatcgcggcattaatatgcATGTGCTGGACTTCAGTCACCACATGCATAtt                                                                                             >  1:72150‑M1/69‑100 (MQ=255)
      gCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATAtt                                                                                             >  1:2226794/1‑100 (MQ=255)
       cTGAAGTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTa                                                                                            <  2:1179529/100‑1 (MQ=255)
       acaactattaaagatgggcaatgcctgacatcgacacgtaaaaatcacgatcgcggcattaatatgcATGTGCTGGACTTCAGTCACCACATGCATATTa                                                                                            >  2:145987‑M1/68‑100 (MQ=255)
         gAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAAt                                                                                          >  1:2540125/1‑100 (MQ=255)
          aaTTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAAt                                                                                          <  2:1918188/99‑1 (MQ=255)
          aaTTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATg                                                                                         <  2:2201614/100‑1 (MQ=255)
          aaTTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATg                                                                                         >  1:2336668/1‑100 (MQ=255)
           aTTTGGCTAAATCGTTTCTCTACGTCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGc                                                                                        <  1:625092/100‑1 (MQ=255)
           aTTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGc                                                                                        >  1:2985681/1‑100 (MQ=255)
            ttttGCTAAATCGTTTCTCTTCGCCTTTGTAATCTAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGcc                                                                                       <  1:1763404/100‑1 (MQ=255)
             ttGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCcg                                                                                      <  1:807892/100‑1 (MQ=255)
             attaaagatgggcaatgcctgacatcgacacgtaaaaatcacgatcgcggcattaatatgcATGTGCTGGACTTCAGTCACCACATGCATATTAATGCcg                                                                                      >  1:579384‑M1/62‑100 (MQ=255)
                  tAAATCGTTTCTCTTCGTCTTTGTAATCCAACAGATGATGCTCCGCAATAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGAt                                                                                  <  2:588461/99‑1 (MQ=255)
                   aaaTCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCg                                                                                >  1:2461150/1‑100 (MQ=255)
                   aaaTCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCg                                                                                <  1:1882419/100‑1 (MQ=255)
                     aTCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTg                                                                              >  2:2256654/1‑100 (MQ=255)
                      tCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCGCATGCATATTAATGCCGCGATCGTGa                                                                             >  2:680424/1‑100 (MQ=255)
                       cGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGa                                                                             >  2:970029/1‑99 (MQ=255)
                        gTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGAtt                                                                           <  1:3040883/100‑1 (MQ=255)
                           cttctACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGGGATCGTGAttttt                                                                        <  1:2039372/98‑1 (MQ=255)
                            ctctACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTa                                                                       >  2:250772/1‑100 (MQ=255)
                             tctACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTAc                                                                      <  1:1204363/100‑1 (MQ=255)
                             tctACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCACTCACCACATGCATATTAATGCCGCGATCGTGATTTTTa                                                                       >  1:1916027/1‑99 (MQ=255)
                              ctACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACg                                                                     <  2:1395466/100‑1 (MQ=255)
                               tACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACgt                                                                    >  2:1659675/1‑100 (MQ=255)
                                aCGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACgtg                                                                   <  1:227491/100‑1 (MQ=255)
                                 cGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGGGATCGTGATTTTTACgtgt                                                                  <  2:1322067/100‑1 (MQ=255)
                                 cGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACgtgt                                                                  >  1:2619155/1‑100 (MQ=255)
                                  gCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTc                                                                 <  2:2308694/100‑1 (MQ=255)
                                   ccTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCg                                                                >  1:1705321/1‑100 (MQ=255)
                                    cTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGa                                                               >  1:643921/1‑100 (MQ=255)
                                    cTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGa                                                               >  1:707805/1‑100 (MQ=255)
                                      ttccgatctagcagATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATg                                                             <  2:2828248/91‑1 (MQ=255)
                                      ttGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACgtgagatcg                                                             >  2:189405/1‑94 (MQ=255)
                                          aaTCCAGCAGATGATGATCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAg                                                         <  2:714182/100‑1 (MQ=255)
                                            tCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGc                                                       <  2:1899723/100‑1 (MQ=255)
                                               agcagATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGACGCGATCGTGATTTTTACGTGTCGATgagatcggaa                                                    >  1:2828280/1‑91 (MQ=255)
                                                gcagATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTg                                                   >  1:1809901/1‑100 (MQ=255)
                                                gcagATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTg                                                   <  2:2206940/100‑1 (MQ=255)
                                                  agATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGcc                                                 >  2:1984790/1‑100 (MQ=255)
                                                  agATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGcc                                                 >  2:208341/1‑100 (MQ=255)
                                                     tgatgCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCAt                                              >  1:1637864/1‑100 (MQ=255)
                                                     tgatgCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCAAt                                              >  2:1170211/1‑100 (MQ=255)
                                                          cTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTa                                         >  1:1157826/1‑100 (MQ=255)
                                                          cTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACATGTCGATGTCAGGCATTACACATCTTTa                                         >  1:1151647/1‑100 (MQ=255)
                                                            cggcattaatatgcatgtggtgactgaagtccagcacatGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAAt                                       >  1:579384‑M2/40‑100 (MQ=255)
                                                            ccGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAAt                                       >  2:201525/1‑100 (MQ=255)
                                                             cGCAAGAATCACAATGTGCTGGACTTCAGTCTCCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATa                                      <  1:1857479/100‑1 (MQ=255)
                                                             cGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATa                                      <  2:2007699/100‑1 (MQ=255)
                                                             cGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATGTTTACGTGTCGATGTCAGTCATTGTCCATCTTTAAt                                       <  2:2136247/99‑1 (MQ=255)
                                                               cAAGAATCACGATGTGCTGGGCTTCAGGCTCCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCGATCTTTAATAGt                                    <  2:2123570/100‑1 (MQ=255)
                                                               cAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGt                                    >  2:953677/1‑100 (MQ=255)
                                                                 aGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTg                                  <  2:1579046/100‑1 (MQ=255)
                                                                 aGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTg                                  >  2:2142438/1‑100 (MQ=255)
                                                                  taatatgcatgtggtgactgaagtccagcacatGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGt                                 >  2:145987‑M2/34‑100 (MQ=255)
                                                                  gAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGt                                 >  1:1286715/1‑100 (MQ=255)
                                                                   aaTCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTc                                <  1:516658/100‑1 (MQ=255)
                                                                      cacaATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGc                             <  1:1246298/100‑1 (MQ=255)
                                                                      cacaATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGc                             <  1:1363943/100‑1 (MQ=255)
                                                                      cacaATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGc                             <  2:1587545/100‑1 (MQ=255)
                                                                       acaATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCa                            >  2:2963060/1‑100 (MQ=255)
                                                                       acaATGTGCTGGACTTCAGTCAACACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCa                            >  2:2877423/1‑100 (MQ=255)
                                                                        caATGTTCTGGACTTCAGTCACCACATGCATATTAATGCTGTTATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCAc                           <  1:2392683/100‑1 (MQ=255)
                                                                            GTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATg                       >  1:2457479‑M1/1‑100 (MQ=255)
                                                                             tggtgactgaagtccagcacatGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATgg                      >  2:346059‑M2/23‑100 (MQ=255)
                                                                             TGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTACCCATATTTAATAATTATCAGCACTATg                       <  1:1983035‑M1/99‑1 (MQ=255)
                                                                             TGCTGGACTTCAGTCACCACATGCATATTAATGACGCTATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATgg                      >  1:933884‑M1/1‑100 (MQ=255)
                                                                              GCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGc                     <  1:792738‑M1/100‑1 (MQ=255)
                                                                              GCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGc                     <  1:1395267‑M1/100‑1 (MQ=255)
                                                                               cTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCg                    >  1:2081105/1‑100 (MQ=255)
                                                                               cTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTAGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCg                    >  1:32442/1‑100 (MQ=255)
                                                                                tGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTAAGGCATTACACATCTTTAATAGTTGTCAGCACTATGGCGt                   >  1:37058/1‑100 (MQ=255)
                                                                                    cTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGa               >  2:2831414/1‑100 (MQ=255)
                                                                                    cTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGa               >  2:2516359/1‑100 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTATGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGAGTTCGAag             >  2:1514998/1‑100 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTTGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAag             <  1:2388089/100‑1 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAag             >  1:1525232/1‑100 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAag             <  1:2591928/100‑1 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAag             <  2:1714737/100‑1 (MQ=255)
                                                                                      tCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAag             >  1:1305270/1‑100 (MQ=255)
                                                                                        aGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAagag           <  2:2463359/100‑1 (MQ=255)
                                                                                        aGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAagag           <  2:2345221/100‑1 (MQ=255)
                                                                                        aGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAagag           <  1:1340881/100‑1 (MQ=255)
                                                                                          tCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTTTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGAt         <  2:1316998/100‑1 (MQ=255)
                                                                                          tCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGAt         <  2:2975236/100‑1 (MQ=255)
                                                                                            accacATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAg       <  2:1273710/100‑1 (MQ=255)
                                                                                             ccacATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGa      >  1:1773517/1‑100 (MQ=255)
                                                                                                catGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACt   >  2:2306367‑M2/4‑100 (MQ=255)
                                                                                                catGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACt   <  1:2433151‑M2/97‑1 (MQ=255)
                                                                                                catGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACt   >  1:412947‑M2/4‑100 (MQ=255)
                                                                                                 atGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACtt  <  2:2336641‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
GTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGCTGGACTTCAGTCACCACATGCATATTAATGCCGCGATCGTGATTTTTACGTGTCGATGTCAGGCATTGCCCATCTTTAATAGTTGTCAGCACTATGGCGTTCGAAGAGATAGAACTT  >  NC_000913/4602522‑4602718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.