New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 277706NA (NA)9 (0.090) 7/164 NT NA noncoding (32/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 277737 NA (NA)noncoding (63/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 171 total aligned reads displayed.

GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836
                                                                                                   |                                                                                                   
gcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGC                                                                                                     <  1:2904714‑M2/100‑1 (MQ=255)
 cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTTTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                    >  1:1018744/1‑100 (MQ=255)
  gAAGCTGAGGTTTTATCGGGTCTACTTCTTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCt                                                                                                   <  1:782947/100‑1 (MQ=255)
  gAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCAGCAGGCATTGCCGGAGGGCGGCACAAGCGCCTTATCCGGCCt                                                                                                   <  1:1845552/100‑1 (MQ=255)
    aGCTGAGGGGTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTan                                                                                                 <  2:2935800/100‑2 (MQ=255)
     gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                                                                >  1:569741/1‑100 (MQ=255)
     gCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACa                                                                                                >  1:2019118/1‑100 (MQ=255)
       tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                                                              >  2:1135728/1‑100 (MQ=255)
       tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                                                              >  2:2672605/1‑100 (MQ=255)
       tGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaa                                                                                              <  2:1998762/100‑1 (MQ=255)
        gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                                             <  2:1921645/100‑1 (MQ=255)
        gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                                             >  2:2301348/1‑100 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  2:474787/100‑1 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  1:941193/100‑1 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  1:2442236/100‑1 (MQ=255)
           ggTTTATCGGGTCAACATCGTTCATTGTAGGACTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                                                          >  1:2042845/1‑100 (MQ=255)
            gTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACcac                                                                                         >  1:2663161/1‑100 (MQ=255)
               tATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaaa                                                                                      >  1:2389337/1‑100 (MQ=255)
               tATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCACCTTATCCAGCCTACAAAACCACaaa                                                                                      >  1:505249/1‑100 (MQ=255)
                  cGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACg                                                                                   >  2:2959118/1‑100 (MQ=255)
                   gggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGt                                                                                  <  1:1282841/100‑1 (MQ=255)
                    ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                                                 <  2:2389310/100‑1 (MQ=255)
                    ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                                                 >  2:167709/1‑100 (MQ=255)
                     gTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTa                                                                                >  2:2555517/1‑100 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                                             <  2:1022796/100‑1 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                                             <  2:1101803/100‑1 (MQ=255)
                          cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACGAATCGTTATGCCg                                                                           <  2:481400/100‑1 (MQ=255)
                           ntCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGACCTACAAAACCACAAAACGTTATGCCGc                                                                          >  1:2307733/2‑100 (MQ=255)
                           aTCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGGTATGCCGc                                                                          >  2:2121525/1‑100 (MQ=255)
                             cGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCAt                                                                        >  2:1069616/1‑100 (MQ=255)
                             cGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCACCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCAt                                                                        >  1:408258/1‑100 (MQ=255)
                             cGTTCATTGTAGGCCTGATAAAAGCATCGCATCAAGCATTGCTGGATGGCGGCACAAGCGCCTGAGCAGACCTACAAAAACACAAAACATTa                                                                                >  2:1357104/1‑92 (MQ=255)
                                tCATTGTAGGCTTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCg                                                                     <  1:1457824/100‑1 (MQ=255)
                                 cATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGc                                                                    <  2:3033661/100‑1 (MQ=255)
                                  aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                                                   <  2:1447252/100‑1 (MQ=255)
                                  aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                                                   <  1:1857594/100‑1 (MQ=255)
                                     gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                                                                >  1:2536949/1‑100 (MQ=255)
                                     gTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGa                                                                <  2:2362274/100‑1 (MQ=255)
                                      tAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaa                                                               <  2:92051/100‑1 (MQ=255)
                                       aGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaac                                                              >  2:550635/1‑100 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCTGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             >  1:1658801/1‑100 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             >  2:862609/1‑100 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             <  1:2208838/100‑1 (MQ=255)
                                        ggCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaaca                                                             <  1:1697462/100‑1 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGTGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  1:521543/100‑1 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  1:693687/100‑1 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  1:2549086/100‑1 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGCCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCCACTAAACCACCAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  2:1871525/100‑1 (MQ=255)
                                            tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  2:2499555/99‑1 (MQ=255)
                                               tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCTTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                                                      >  2:2186349/1‑100 (MQ=255)
                                               tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                                                      <  2:2482299/100‑1 (MQ=255)
                                               tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                                                      >  1:1543184/1‑100 (MQ=255)
                                                  gcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagaccc                                                   <  1:1105185‑M2/100‑51 (MQ=255)
                                                  gcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGt                                                   <  2:2276986/100‑1 (MQ=255)
                                                   cgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTa                                                  <  1:987504/100‑1 (MQ=255)
                                                    gcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAGAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTAc                                                 >  2:184062/1‑100 (MQ=255)
                                                     cagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACg                                                <  1:245488/100‑1 (MQ=255)
                                                      agcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg                                               <  1:431605/100‑1 (MQ=255)
                                                       gcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga                                              >  2:2012982/1‑100 (MQ=255)
                                                        cgcaTCAGGCATTGCCGTATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCATAACAAACATGCCGTACggat                                             <  2:1433932/100‑1 (MQ=255)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg                                            >  1:2070373/1‑100 (MQ=255)
                                                          caTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                           >  1:1010002/1‑100 (MQ=255)
                                                              aGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagtcccgataaaccctca                                       <  1:2998846‑M2/100‑63 (MQ=255)
                                                                gCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCa                                     <  2:754976/100‑1 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagc                                     <  1:2708491‑M2/99‑65 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    <  1:874079/100‑1 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    <  1:2227868/100‑1 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagctt                                   <  1:1192254‑M2/100‑67 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    >  1:1432968/1‑99 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAg                                   <  1:3044788/100‑1 (MQ=255)
                                                                   ttGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGa                                  <  1:1956386/100‑1 (MQ=255)
                                                                    tGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcg                                 <  1:1662110‑M2/100‑69 (MQ=255)
                                                                    tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat                                 <  1:2541173/100‑1 (MQ=255)
                                                                     gacGGATGGCGGCACAAGTGCCTTAACCTGCCTTCAAAACCACGAACCGTGATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    <  2:2049939/94‑1 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  1:778270/1‑100 (MQ=255)
                                                                        ggATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataata                             <  2:2663129/100‑1 (MQ=255)
                                                                         gATGGCGGCACAAGCGCCTTATCCGGCCTACGAAACCTCAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATAc                            <  2:2047788/100‑1 (MQ=255)
                                                                         gATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATAc                            <  1:2818452/100‑1 (MQ=255)
                                                                          aTGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATACGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACt                           >  1:53924/1‑100 (MQ=255)
                                                                            ggcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGc                         <  1:1078159/100‑1 (MQ=255)
                                                                            ggcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGc                         >  1:2724624/1‑100 (MQ=255)
                                                                             gcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCt                        >  1:2866826/1‑100 (MQ=255)
                                                                             gcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATACCGTACGGATGGATTTCAAGATAATACTGCt                        >  1:433774/1‑100 (MQ=255)
                                                                                gcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTAAGGATGGATTTCAAGATAATACTGCt                        >  2:2572358/1‑97 (MQ=255)
                                                                                  acaAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCg                   <  2:732482/100‑1 (MQ=255)
                                                                                   caAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGa                  >  2:1273192/1‑100 (MQ=255)
                                                                                      gcgcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGt               <  1:2133060/100‑1 (MQ=255)
                                                                                        gcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTcc             <  2:280824/100‑1 (MQ=255)
                                                                                            tATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGtt         >  2:1742092/1‑100 (MQ=255)
                                                                                              tCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcag       <  1:1864078‑M2/100‑95 (MQ=255)
                                                                                              tCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGATCTAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc       <  1:291316/100‑1 (MQ=255)
                                                                                              tCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc       >  1:2799533/1‑100 (MQ=255)
                                                                                                cGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggc     <  1:1574330‑M2/100‑97 (MQ=255)
                                                                                                cGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggc     <  1:1401904‑M2/100‑97 (MQ=255)
                                                                                                cGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggc     <  2:224268‑M2/100‑97 (MQ=255)
                                                                                                 ggCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcg    >  2:431602‑M2/1‑3 (MQ=255)
                                                                                                 ggCaatgcctgatgcgctgcgcttatcaggcctacaaagaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcg    <  2:1613979‑M2/100‑98 (MQ=255)
                                                                                                 ggCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGCTTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAg     <  2:1609681/99‑1 (MQ=255)
                                                                                                   ccTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAAATAATACTACTCGCCGACGTCCGGTTGCAGAc   >  1:1648188/1‑99 (MQ=255)
                                                                                                   caatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcgtg  >  1:1447266‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.