BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	409056 =	NA (NA)	8 (0.080)	5/164	NT	NA	noncoding (5/37 nt)	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP34 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	409089 =	NA (NA)	8 (0.080)	5/164	NT	NA	intergenic (+139/+19)	ykiA/rdgC	pseudogene/nucleoid‑associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function

Only 100 of 164 total aligned reads displayed.

ATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGA  >  NC_000913/408990‑409184

atatTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCa                                                                                                 <  2:279976/100‑1 (MQ=255)

 tatTGCTGCGCTAAAAATTATTGCTCGTCGTAGCGAATATTTATATGCCTGGTGTGGCTTCGTACGTCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                <  1:2014516/100‑1 (MQ=255)

 tatTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                <  2:759341/100‑1 (MQ=255)

 tatTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                >  2:316199/1‑100 (MQ=255)

 aattcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                >  1:338171‑M1/66‑100 (MQ=255)

  attcaaaacctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                               >  1:64725‑M1/65‑100 (MQ=255)

  atTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCAtt                                                                                               >  1:1301698/1‑100 (MQ=255)

    tgctgcGCTAAAAATTATTGCTCGTCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTaa                                                                                             <  1:310963/100‑1 (MQ=255)

    tgctctgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGTATAATACGTGGCAGGCGTCGCATCCGGCATTa                                                                                              <  2:697891/93‑1 (MQ=38)

     tctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGTATAAGACGCGGCAGGCGTCGCATCCGGCAt                                                                                                <  1:2461636/95‑1 (MQ=255)

      ctgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGGCGCGGCAGGCGTCGCATCCGGCATTAAAg                                                                                           <  1:2080581/100‑1 (MQ=255)

       ttctcTAAAACTTATTGCTCGTCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGCATGCCGGATAAGATGCGGCTGTCGTCGTATACGGCATTaacg                                                                                           <  2:1422688/95‑3 (MQ=255)

       tgcGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAgg                                                                                          <  2:958423/100‑1 (MQ=255)

        gcgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGa                                                                                         >  1:2341100/1‑100 (MQ=255)

         cgcTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGaa                                                                                        >  1:1973265/1‑100 (MQ=255)

         acctgattgaaggattaggtggcgaagcacaacgttaattgctgattttcctttaatGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAgg                                                                                          >  2:2601946‑M1/58‑98 (MQ=255)

            tAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAAt                                                                                     <  2:2321150/100‑1 (MQ=255)

             aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                                                    >  1:435804/1‑100 (MQ=255)

             aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATc                                                                                    >  2:213260/1‑100 (MQ=255)

             aaaaaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACACGGCAAACATCAAATAAGACAATAAAGGAAAAt                                                                                     >  1:1133558/1‑99 (MQ=255)

               aaaTTATTGCTCGCCGTAGCGAATAATTATATACCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAg                                                                                  >  2:665013/1‑100 (MQ=255)

                aaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGc                                                                                 <  2:1849831/100‑1 (MQ=255)

                aaTTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGc                                                                                 <  2:1539132/100‑1 (MQ=255)

                 attattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCa                                                                                >  1:2954875/1‑100 (MQ=255)

                 attattGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTAGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGc                                                                                 <  1:2952950/99‑1 (MQ=255)

                       gCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAc                                                                          >  2:245930/1‑100 (MQ=255)

                            ccGTAGCGAATCATTATATGACTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCCTCCGGCATTAAAGGAAAATCAGCAATAAAAGTtg                                                                      >  2:1906835/1‑99 (MQ=38)

                            ccGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTCACGTtgt                                                                     <  1:1593416/100‑1 (MQ=255)

                            ccGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtgt                                                                     >  2:2334870/1‑100 (MQ=255)

                             cGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtgtg                                                                    >  1:78366/1‑100 (MQ=255)

                              gTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGACGGATAAAACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTtgtg                                                                    <  2:2169111/99‑1 (MQ=255)

                               tAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCt                                                                  >  2:1225579/1‑100 (MQ=255)

                                   gAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGc                                                              >  1:2385554/1‑100 (MQ=255)

                                    aataatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGcc                                                             >  2:847402/1‑100 (MQ=255)

                                      taatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAc                                                           >  1:2311651/1‑100 (MQ=255)

                                      taatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCAc                                                           >  1:1550226/1‑100 (MQ=255)

                                      taatTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGAAATTAACGTTGTGCttggacaa                                                           >  1:555377/1‑94 (MQ=255)

                                        atTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCt                                                         <  1:709102/100‑1 (MQ=255)

                                        atTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCt                                                         <  1:421080/100‑1 (MQ=255)

                                         ctataTGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTa                                                        <  2:633894/99‑1 (MQ=255)

                                           atatGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTaag                                                      >  1:633898/1‑99 (MQ=255)

                                             atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGTGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                                                    <  1:294254/100‑1 (MQ=255)

                                             atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGTGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                                                    >  1:389632/1‑100 (MQ=255)

                                             atGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATcc                                                    <  2:695252/100‑1 (MQ=255)

                                              tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCt                                                   >  1:397680/1‑100 (MQ=255)

                                              tGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCt                                                   <  2:1603442/100‑1 (MQ=255)

                                                ccTGGTGTGGCTTCGTACGCCGGATAATTTGTTGCAGGTTTCGCATCCGGCATTAAAGGAAAATCAGCAATTAAAGTTGTGCTTCGCCACCTAATCCTTc                                                 <  1:1094623/100‑1 (MQ=255)

                                                ccTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTc                                                 >  1:1609081/1‑100 (MQ=255)

                                                 cTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCa                                                <  1:108947/100‑1 (MQ=255)

                                                  tGGTGTGGCTTCGTACGCCGGATAAGACGCTGCAGGCGTCGCATTCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCaa                                               <  1:994524/100‑1 (MQ=255)

                                                  tGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCaa                                               >  1:1741568/1‑100 (MQ=255)

                                                     tgtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACATAATCCTTCAATCa                                            >  2:1321962/1‑100 (MQ=255)

                                                      gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                           >  2:2774805/1‑100 (MQ=255)

                                                      gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                           >  2:272754/1‑100 (MQ=255)

                                                      gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                           >  1:2086762/1‑100 (MQ=255)

                                                      gtgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAg                                           >  1:2929753/1‑100 (MQ=255)

                                                      gtagattCGTAAGAAGGATAAGACGCGGCAGGAGTCGAATCCCGCATTAAAGGAATAGCAGCAATGAACTGTTTTCTTCTCCACCTAATCCTTCAATCa                                            <  2:555374/94‑1 (MQ=255)

                                                       tgGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTACTTCGCCACCTAATCCTTCAATCAgg                                          >  1:1388550/1‑100 (MQ=255)

                                                        ggCTTCGTACGTCGGATAAGACGCGGCAGGCGTCGCATCCGGTATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                         <  1:2653692/100‑1 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                         <  2:2662710/100‑1 (MQ=255)

                                                        ggCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGt                                         >  1:466227/1‑100 (MQ=255)

                                                          cctttaatgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGttt                                       >  1:797323‑M2/42‑100 (MQ=255)

                                                           ttCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGtttt                                      <  2:204740/100‑1 (MQ=255)

                                                            tCGTACGCCGGCTAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAACTCTGCAATTAACGTTGTGCTTCGCCACCTTATCCTTCAATCAGGTTTTg                                     <  2:337311/100‑1 (MQ=39)

                                                             cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCGGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                    >  1:591559/1‑100 (MQ=255)

                                                             cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                    <  1:2124335/100‑1 (MQ=255)

                                                             cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGa                                    <  2:256827/100‑1 (MQ=255)

                                                             cGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCCTCGCCACCTAATCCTTCAATCAGGTTTTGa                                    >  2:2108385/1‑100 (MQ=255)

                                                              gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                   <  1:1955144/100‑1 (MQ=255)

                                                              gTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGaa                                   <  1:1784095/100‑1 (MQ=255)

                                                               tACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAt                                  <  2:2540341/100‑1 (MQ=255)

                                                                atgccggatgcgacgcctgccgcgtcttatccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                 >  1:1577637‑M2/36‑100 (MQ=255)

                                                                aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAAtt                                 <  1:365404/100‑1 (MQ=255)

                                                                aCGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGAAATTAACGTTGTGCTTCGGCACCTAATCCTTCAATCAGGTTTTGAAt                                  >  2:2656729/1‑99 (MQ=255)

                                                                 cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa                                <  1:1211969/100‑1 (MQ=255)

                                                                 cGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTa                                >  2:619830/1‑100 (MQ=255)

                                                                  GCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTaa                               >  2:1404646‑M1/1‑100 (MQ=255)

                                                                   CCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAAc                              >  1:2488832‑M1/1‑100 (MQ=255)

                                                                    CGGATAAGACGCGGCAGGCGTCGCATACGGCATTAAAGGAAAATCACCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGACTTAACg                             >  2:136446‑M1/1‑100 (MQ=255)

                                                                     GGATAAGACGCGGCAGGCGTCGCATCCGTCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGc                            >  1:1493420‑M1/1‑100 (MQ=255)

                                                                     GGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATTAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACg                             >  1:1663913‑M1/1‑99 (MQ=255)

                                                                     GGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGc                            <  1:2826024‑M1/100‑1 (MQ=255)

                                                                     GGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGc                            >  1:2757502‑M1/1‑100 (MQ=255)

                                                                       ATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTg                          >  1:1835763‑M1/1‑100 (MQ=255)

                                                                       ATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTg                          >  1:2429021‑M1/1‑100 (MQ=255)

                                                                         aaGACGCGGCAGGCGTCGCATCCGGCATTAAATGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                        <  1:1258198/100‑1 (MQ=255)

                                                                         aaGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGcc                        <  1:2976719/100‑1 (MQ=255)

                                                                          aGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGCTTTTGAATTAACGCTGCCa                       >  2:2356924/1‑100 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAgag                    >  1:11625/1‑98 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGtt                    >  2:2563234/1‑100 (MQ=255)

                                                                             cgcgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGt                     >  1:2675494/1‑99 (MQ=255)

                                                                               cgGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCa                  >  1:2770455/1‑100 (MQ=255)

                                                                                 gCAGGCGTCGGAGCCGGCATGAAAGGAAACTCAGCAATTATCGTTGTGCTTCGCCAGCTAATCCTTCAATCAGGTTTTGAATTAACGATGCCAGTTCAcc                <  2:1818115/100‑1 (MQ=255)

                                                                                       gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcat          >  2:867641/1‑100 (MQ=255)

                                                                                       gTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtca           <  2:1643672/99‑1 (MQ=255)

                                                                                         cGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatca        <  2:1062608/100‑1 (MQ=255)

                                                                                         cGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatca        >  1:704474/1‑100 (MQ=255)

                                                                                         cGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGtcatca        <  1:1901422/100‑1 (MQ=255)

                                                                                           cATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAgg      >  1:2653096/1‑100 (MQ=255)

                                                                                              ccggcATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACACTGCCAGTTCACCAGTCATCAGGATg   >  1:3034731‑M2/6‑100 (MQ=255)

ATATTGCTGCGCTAAAAATTATTGCTCGCCGTAGCGAATAATTATATGCCTGGTGTGGCTTCGTACGCCGGATAAGACGCGGCAGGCGTCGCATCCGGCATTAAAGGAAAATCAGCAATTAACGTTGTGCTTCGCCACCTAATCCTTCAATCAGGTTTTGAATTAACGCTGCCAGTTCACCAGTCATCAGGATGA  >  NC_000913/408990‑409184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.