New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)13 (0.130) 6/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 130 total aligned reads displayed.

TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAA  >  NC_000913/805737‑805934
                                                                                                   |                                                                                                  
tccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTACCCGAcc                                                                                                    >  1:1632419‑M1/68‑100 (MQ=255)
tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                                                    <  2:2146890/100‑1 (MQ=255)
tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                                                    <  1:131670/100‑1 (MQ=255)
 ccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                                                   >  2:1971300‑M1/67‑100 (MQ=255)
 ccaacaataagtgccggatgctgctaaaatgccttatctggcctacagatacgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                                                   >  1:2843311‑M1/67‑100 (MQ=255)
 aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGAGATGCTTGAGAATATTATACGAACt                                                                                                   >  1:1415629/1‑100 (MQ=38)
   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                                                 >  1:2020787/1‑100 (MQ=255)
   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                                                 >  2:1832605/1‑100 (MQ=255)
    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                <  2:572071/100‑1 (MQ=255)
    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATACTTGCGCATCTTATACGACCTAc                                                                                                 >  1:962461/1‑99 (MQ=255)
     tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                                               >  2:1827761/1‑100 (MQ=255)
      aataagtgccggatgctgcgaaaatgccttatctggcctagagcttcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                                                              >  2:1962926‑M1/62‑100 (MQ=255)
       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                                                             >  2:1516042/1‑100 (MQ=255)
       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                                                             <  1:2204238/100‑1 (MQ=255)
        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTAGGCACTTATTGTTGGATACGATGCTTGCGCATCTTATCCGACCTACGAATc                                                                                            >  2:1008633/1‑100 (MQ=255)
          aaaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGc                                                                                          >  2:804545/1‑100 (MQ=255)
            aaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCAt                                                                                        <  2:1095008/100‑1 (MQ=255)
             aaCCGGCAGATGTAAAAAGCGCCATGTGAATTTAGGTCGCATTCTGCACTTATTGTCGGATGCGATGCTTGTGCATCTTATCCGACCTACGAATCGCagc                                                                                       <  2:804002/100‑3 (MQ=25)
               ccGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                                                     <  1:2544861/100‑1 (MQ=255)
                 gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAAt                                                                                   >  2:308122/1‑100 (MQ=255)
                  tCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                                                  <  1:2900099/100‑1 (MQ=255)
                     gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGTACTTATTGTCGGATGCGATGCTTGCGCAGCTTATCCGACCTACGAATCGCATCGAATCTg                                                                                <  1:2606206/99‑1 (MQ=255)
                     gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGt                                                                               >  2:1112338/1‑100 (MQ=255)
                     gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGt                                                                               >  1:2801421/1‑100 (MQ=255)
                        gTAAAAAGCGCCATGTGAATTTAGGTCGTATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGGCCTACGAATCGCATCGAATCTGTAgg                                                                            <  1:2083771/100‑1 (MQ=255)
                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                                                            >  2:2573284/1‑100 (MQ=255)
                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                                                            <  1:1028152/100‑1 (MQ=255)
                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTACGCATCTTATCCGACCTACAAATCGCATCGAATCTGTAgg                                                                            >  1:2020998/1‑100 (MQ=255)
                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGc                                                                           >  2:1750389/1‑100 (MQ=255)
                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGcc                                                                          >  2:1333/1‑100 (MQ=255)
                               gcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATa                                                                     >  2:1062693/1‑100 (MQ=255)
                                 gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                                                   >  2:836708/1‑100 (MQ=255)
                                   cATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGc                                                                 >  1:2784135/1‑100 (MQ=255)
                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAtcggaaga                                                               >  2:189893/1‑93 (MQ=255)
                                     tgtgAATGTAGGTCGCATTCGACACTTATTGTCGGATGCGATGCTTGCGCCTCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCa                                                                >  2:1260751/1‑99 (MQ=255)
                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGc                                                                 <  2:2202619/97‑1 (MQ=255)
                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtt                                                              <  1:2463968/100‑1 (MQ=255)
                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtt                                                              >  1:2211992/1‑100 (MQ=255)
                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtt                                                              <  1:59753/100‑1 (MQ=255)
                                       tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                                                             >  1:2881675/1‑100 (MQ=255)
                                        gAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGAATCGAATCTGTAGGCCAGATAAGGCAtttt                                                            >  1:1562595/1‑100 (MQ=255)
                                         aaTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTc                                                           <  2:2494988/100‑1 (MQ=255)
                                          aTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCg                                                          <  2:1518592/100‑1 (MQ=255)
                                          aTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCg                                                          >  1:964281/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                                                     >  1:2479797/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAAATAAGGCATTTTCgcagca                                                     >  1:663128/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCACATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                                                     >  1:326975/1‑100 (MQ=255)
                                                gTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                                                     >  1:566229/1‑99 (MQ=255)
                                                gTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCAt                                                    >  1:1690193/1‑100 (MQ=255)
                                                  cGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATcc                                                  <  2:2285048/100‑1 (MQ=255)
                                                   gCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGCCCTACGAATCGCATCGAATCTGTAAGCCAGATAAGGCATTTTCGCAGCATCCg                                                 >  1:1240473/1‑100 (MQ=255)
                                                   gCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATcc                                                  >  1:1847870/1‑99 (MQ=255)
                                                    cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgg                                                <  2:2881643/100‑1 (MQ=255)
                                                     aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                                               <  2:1536579/100‑1 (MQ=255)
                                                       tCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCAc                                             >  1:2433075/1‑100 (MQ=255)
                                                        cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAACATCCGGCACt                                            <  2:261500/100‑1 (MQ=255)
                                                            ttcgtaggtcggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAAGCTCTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAtt                                        >  2:1962926‑M2/40‑100 (MQ=255)
                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg                                    >  2:1166775/1‑100 (MQ=255)
                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg                                    <  2:1063784/100‑1 (MQ=255)
                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg                                    >  1:737608/1‑100 (MQ=255)
                                                                  ggtcgggtaagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga                                  >  1:1632419‑M2/34‑100 (MQ=255)
                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                 <  2:2444533‑M1/100‑1 (MQ=255)
                                                                     cGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGACAATAAGTGCCGgatgc                               <  2:461911/100‑1 (MQ=18)
                                                                     CGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                               >  1:2602335‑M1/1‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  2:2058244‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  2:2707827‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  1:1714310‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  1:918870‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGAAAAGGCATTTTCACAGCATCCGGCACTTATTATCGgat                                 >  1:2633665‑M2/30‑97 (MQ=255)
                                                                      GGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  1:323490‑M1/1‑100 (MQ=255)
                                                                       gataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                             >  1:818293‑M2/29‑100 (MQ=255)
                                                                       gataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                             >  1:1294870‑M2/29‑100 (MQ=255)
                                                                         TGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgatg                           <  1:2182663‑M1/100‑1 (MQ=255)
                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTTGCGgatgcga                             >  2:3047039/1‑96 (MQ=255)
                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgat                            >  2:2807224/1‑97 (MQ=255)
                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCt                         >  1:2488609/1‑100 (MQ=255)
                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCt                         >  2:2802732/1‑100 (MQ=255)
                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCt                         >  1:1141632/1‑100 (MQ=255)
                                                                            gatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCtt                        >  2:2407585/1‑100 (MQ=255)
                                                                             atgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTg                       <  1:2209439/100‑1 (MQ=255)
                                                                               gcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAAACATTTTCGCAGCATCCAGCACTTATTGTCGGATGCGATGCTTgcg                     >  1:953998/1‑100 (MQ=255)
                                                                                cTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCATgcgc                    >  2:128489/1‑100 (MQ=255)
                                                                                 ttGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCa                   <  2:2504273/100‑1 (MQ=255)
                                                                                   gcgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                 >  1:1952491/1‑100 (MQ=255)
                                                                                   gcgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                 <  1:1512983/100‑1 (MQ=255)
                                                                                    cgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                <  1:1933393/100‑1 (MQ=255)
                                                                                     gcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCtt               >  1:3014006/1‑100 (MQ=255)
                                                                                       aTCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTAt             >  2:1372431/1‑100 (MQ=255)
                                                                                       aTCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTAt             >  1:809181/1‑100 (MQ=255)
                                                                                       aTCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTAt             >  1:809018/1‑100 (MQ=255)
                                                                                       aTCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGACGGATGCGATGCTTGCGCATCTTAt             >  2:881606/1‑100 (MQ=255)
                                                                                        tCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc            <  2:2931372/100‑1 (MQ=255)
                                                                                         cTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc           <  1:2253626/100‑1 (MQ=255)
                                                                                           tATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGAGCATCTTATCCGa         >  1:667516/1‑100 (MQ=255)
                                                                                            atccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc        <  1:1055745‑M2/93‑1 (MQ=255)
                                                                                             tccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc       <  2:818289‑M2/94‑1 (MQ=255)
                                                                                              ccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt      >  2:2885246‑M2/6‑100 (MQ=255)
                                                                                               cgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc       <  2:737604‑M2/94‑1 (MQ=255)
                                                                                                 acCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACa   <  1:2444562‑M2/98‑1 (MQ=255)
                                                                                                  cCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACaa  >  1:147412‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                  
TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAA  >  NC_000913/805737‑805934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.