| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1269694 | 72 (0.670) | 11 (0.110) | 5/166 | NT | 16.3% | intergenic (‑419/+9) | ldrA/ldrB | toxic polypeptide, small/toxic polypeptide, small |
| ? | NC_000913 | = 1270193 | 46 (0.460) | intergenic (‑383/+45) | ldrB/ldrC | toxic polypeptide, small/toxic polypeptide, small | |||||
GAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGC > NC_000913/1270094‑1270288 | gAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGttt < 1:1824948/100‑1 (MQ=38) gTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcg < 1:1199732‑M2/100‑3 (MQ=255) tGCTTTGGATGATGCTTCCAGCTTGGGTTGCTAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgg > 1:629930‑M2/1‑97 (MQ=255) gCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcggg > 2:19729‑M2/1‑96 (MQ=255) ctctGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggc < 2:1902075‑M2/100‑6 (MQ=255) atgatgCTTGCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgcgc < 1:3008083/96‑1 (MQ=25) gatgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTg > 2:2632021/1‑100 (MQ=38) atgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATAGCCACAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc > 1:848253/1‑100 (MQ=255) tgCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCAAAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc > 1:117514/1‑99 (MQ=16) tgCTTCCAGCTCGGGTTGCAAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc < 2:827315/100‑1 (MQ=18) gCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:3044511/100‑1 (MQ=33) gCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGACCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa > 1:56275/1‑100 (MQ=17) cTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCAt > 2:2149521/1‑100 (MQ=33) cTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGACCGCAGGCTGTTACCACTGCGGCCGGTTTCGGGCGCATATTGCCAt > 1:1431817/1‑100 (MQ=12) ttCCAGCTCGGGTTGCCAATATTTATTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCa < 1:827224/98‑1 (MQ=17) ttCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc > 1:1847016/1‑100 (MQ=33) ttCCAGCTCGGGTTGCCAATATTTACTTGTGGAAAAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATc < 2:2211741/100‑1 (MQ=17) cAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACg > 1:2526773/1‑100 (MQ=32) cAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCATGCGGCCGGTTTCGGGCGCATATTGCCATCACg > 1:3035184/1‑100 (MQ=18) gCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGc < 1:2691341/100‑1 (MQ=32) cTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCa < 1:2903597/100‑1 (MQ=32) tCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACGCCTGAGGACGGTTTCGGGCGCATATTGACATAACGGCAg > 2:2839977/1‑100 (MQ=11) gggTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGcc < 2:2416051/100‑1 (MQ=33) ggTTGCCAATATTTACTTGTGGAAGAGATAAAGACACAAATGGCCGCAGGCTGTTACCCCTGCGGCAGGTTTCGGGCGCATATTGCCATCACGGCAGCCt > 1:2346685/1‑100 (MQ=16) gTTGCCAATATTTACTTGTGGAAGATATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTg < 2:1456029/100‑1 (MQ=17) ttGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGa > 1:2553949/1‑100 (MQ=33) tGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc > 1:2923859/1‑100 (MQ=33) ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgcatattgccgtgatggcaatatgcgcc > 1:1812203‑M2/1‑67 (MQ=255) ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc > 2:2833296/1‑100 (MQ=33) ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc < 1:2962269/100‑1 (MQ=32) ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCAGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:1706673/1‑100 (MQ=18) ccAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTATTACCCCTGCGGCCGGTTTCAGGCGCATATTGCCATCACGGCAGCCTGACGc > 1:603756/1‑100 (MQ=12) cAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGcc < 1:2927401/100‑1 (MQ=33) cAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGcc < 1:145633/100‑1 (MQ=32) aaTATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgccc > 1:556925‑M2/1‑65 (MQ=255) atatTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGTTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCg < 1:543640/100‑1 (MQ=17) tatTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccga > 2:470640‑M2/1‑63 (MQ=255) tatTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccga > 1:572395‑M2/1‑63 (MQ=255) tatTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGACCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCg > 2:439472/1‑99 (MQ=17) atTTTCTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACGCTTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtt > 2:289979/1‑100 (MQ=255) ttACTTGTTGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac > 2:2904980‑M2/1‑60 (MQ=255) ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGTAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac > 1:1041941‑M2/1‑60 (MQ=255) ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGCATGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggcggccgtgatggcaatatgcgcccgaaac > 1:824724‑M2/1‑60 (MQ=255) ttACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaac > 2:889282‑M2/1‑60 (MQ=255) tACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaacc > 1:2803074‑M2/1‑59 (MQ=255) tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGTCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTc < 1:907540/100‑1 (MQ=17) tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaacc > 1:1978610‑M2/1‑59 (MQ=255) tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGttttn < 2:2759845/100‑2 (MQ=18) tACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTc > 2:132202/1‑100 (MQ=33) cTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTcgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccgg > 2:898003‑M2/1‑57 (MQ=255) cTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAc > 1:1312519/1‑100 (MQ=32) cTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCAc > 1:333601/1‑100 (MQ=33) cTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCATTTTCAc > 2:1029136/1‑100 (MQ=18) tgtgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCt > 1:1919509/1‑100 (MQ=33) tgtgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCt > 1:2631741/1‑100 (MQ=33) gtgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCtt > 2:793453/1‑100 (MQ=33) tgGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTa < 2:1846995/100‑1 (MQ=32) ggAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc < 1:409810/100‑1 (MQ=33) ggAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc < 1:2711602/100‑1 (MQ=32) gAAGAGATAAAGACAAAAATGGCCGCATGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACt < 1:725796/100‑1 (MQ=18) gAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc < 1:1298416/99‑1 (MQ=32) gagaTAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTcc > 2:1281819/1‑100 (MQ=31) agaTAAAGACAAAAATGGCCGCAGTCTGTTACCCCTGCGGCCGGTTTCGGCCGCATATTGCCATCACGCCAGCCTGACTCCCGTTTTCACCTTACTTCCg < 2:153771/100‑1 (MQ=11) gaaatcgggcgtcaggctgtcgtgatggcaatatgcgtctgaaacctgccgcaggggtaacagcctgcggccatttttgtctttatcacttccacaagta > 1:1552264‑M2/5‑5 (MQ=255) | GAGTGCTCTGGATGATGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGAGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCTGACAATCGCTGCGGTAATAATTCCCGC > NC_000913/1270094‑1270288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |