| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 36,231 | T→C | 100% | intergenic (‑69/+40) | caiD ← / ← caiC | carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 36,231 | 0 | T | C | 97.5% | 319.9 / ‑2.4 | 100 | intergenic (‑69/+40) | caiD/caiC | carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (47/49); total (50/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
GCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCT > NC_000913/36136‑36327 | gCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGa < 1:199815/100‑1 (MQ=255) gggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTACAAAAAATGCATATTGTTTTAGAGCGTGatt < 2:1524881/100‑1 (MQ=255) ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTATTATAACATCCCTTCAAAAAATGCATATTGTTTTAGAGCTTGatta > 1:797886/1‑100 (MQ=255) ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta < 1:1738844/100‑1 (MQ=255) ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta > 2:1046331/1‑100 (MQ=255) ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta > 1:1700953/1‑100 (MQ=255) tccgatctAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGattatt < 1:1094504/93‑1 (MQ=255) cAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGTGACGACAACAAACAAAAAAAAAATGCATATTGTTTTAGAGCGTGAttatta < 2:2952089/100‑1 (MQ=255) cAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGAttatta < 1:154301/100‑1 (MQ=255) cAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAAAAAAAAAAAAAAAAATGCATATTGTTTTAGAGCGTGAttatta < 2:1018794/100‑1 (MQ=255) gATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGc < 1:2415021/100‑1 (MQ=255) gATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGc > 1:1857657/1‑100 (MQ=255) tGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCGTATTGTTTTAGAGTGTGATTATTAGCTg > 1:1550212/1‑100 (MQ=255) gTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTgg > 2:2350804/1‑100 (MQ=255) tAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGc > 1:1050994/1‑100 (MQ=255) aaTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAgatcgga > 2:1094497/1‑94 (MQ=255) aaTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCa > 1:1611531/1‑100 (MQ=255) aTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAg < 1:617895/100‑1 (MQ=255) gATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAggg > 1:1016350/1‑100 (MQ=255) gATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAggg < 1:1864402/100‑1 (MQ=255) aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt < 1:1343728/100‑1 (MQ=255) aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt < 2:2581393/100‑1 (MQ=255) aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt > 1:200104/1‑100 (MQ=255) aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt < 2:496603/100‑1 (MQ=255) ttCACTCATTCCTTTTCTCCATTTTTGCTTTATCAGGGACGACAACATCCCTGCAAAAAATGCATATGGTTTTAGAGCGTGATTATTAGATGGCAGGGTa > 2:1094069/1‑100 (MQ=255) cACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGt > 1:919134/1‑100 (MQ=255) cACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGt > 1:1104511/1‑100 (MQ=255) cACTCATTCCTTTTCTCCATTTTTGATTTTTCAGGGCCGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTa > 2:1340740/1‑98 (MQ=255) cTCATTCCTTTTATCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTc > 1:1994694/1‑100 (MQ=255) cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAAGATCCCTGCAAAAAATGCATATTGTTTTAGAGAGTGAATATTATCTGGCAGGGTatgtcct > 1:941817/1‑94 (MQ=255) cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCGCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTccc < 2:1945778/100‑1 (MQ=255) cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTccc < 2:1438321/100‑1 (MQ=255) tCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATACTGTTTTAGAGCGTGATTATTAGCTGGCACGGTAGTTCCctgc < 1:2056167/100‑1 (MQ=255) ccTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGAGATTATTAGCTGGCAGGGTAGTTCCctgct > 1:1571063/1‑100 (MQ=255) cTTTTCTCCATTTTTTCTTTTTTATTGAAGAAAAGATGCCTGAAAAAAATGCATATTGTTTTAGACCGTGATTTTTTGCTGGCATGGCAGTTcttt > 2:1588989/1‑93 (MQ=255) cTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgctg > 1:2616491/1‑100 (MQ=255) cTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgctg > 1:763844/1‑100 (MQ=255) ttttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGAACTACCctgccag < 2:2932196/100‑4 (MQ=255) tttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGAACTACCctgccagc < 1:1838513/100‑5 (MQ=255) tttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCCTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGtt > 1:2213821/1‑100 (MQ=255) ttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGTAGGGTAGTTCCCTGCTGttt < 2:1857636/100‑1 (MQ=255) ttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTCTAGAGCGTGATTATTAGCTGGCAGGGAATTACCctgccaggt < 1:2054966/100‑6 (MQ=255) ctgcATTTTTGCTTTTTCAGGGATGACAACATCTCTGCAAAAAATGCATATTGTTTGAGAGCGTGATTATTAGCCGGCAGGTTAGTTCCCTGCTGttgc < 2:232225/96‑3 (MQ=255) ctcCATTTTTGCTTTTTCAGGGACGACAACTTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCa < 2:669559/100‑1 (MQ=255) tcCGTTTTTGCTTTTTCAGGGACGAGAACAGCCCTGCAAAAAATGAGTATTGTTTTAGAGTGGGATTAGTAGCTGGCAGGGTGGTGCCttgaggtgt > 2:2262197/1‑91 (MQ=255) tcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCGAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCAGTTTCat > 2:1623050/1‑100 (MQ=255) tcCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTTat > 2:956928/1‑100 (MQ=255) ttttGCTTTTTCAGGGACGACAACATCCCTTCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttatt < 1:328895/100‑1 (MQ=255) tttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttattt < 1:2939411/100‑1 (MQ=255) tttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttattt > 1:2666274/1‑100 (MQ=255) ttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTc < 1:2222714/100‑1 (MQ=255) ttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTc < 1:1104243/100‑1 (MQ=255) tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa < 2:500545/100‑1 (MQ=255) gCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAg > 1:2357142/1‑100 (MQ=255) acTTTTTCAGGGACGACAACATCCCTGAAAAAAATGAATATTGTTTTAGAGCGTGATTATTAACTGGCAGGGTATCTCATTGGTGTTTTATTTATTTAAg > 2:2874675/2‑100 (MQ=255) cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa > 1:2010359/1‑100 (MQ=255) cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa < 1:1483406/100‑1 (MQ=255) cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa > 1:3028184/1‑100 (MQ=255) cAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATCTATTTCAGAttcttt > 2:2366619/1‑100 (MQ=255) gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct < 1:1034538/100‑1 (MQ=255) gggACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttct < 1:2129256/100‑1 (MQ=255) acgacAACATCCCTGCAAAAAATGCGTATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAat < 2:1550194/100‑1 (MQ=255) acgacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAat < 2:395367/100‑1 (MQ=255) acgacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAat < 1:2275039/100‑1 (MQ=255) acaacaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAattat > 2:525235/1‑100 (MQ=255) acaacaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAattat > 1:845677/1‑100 (MQ=255) cccTGCAAAAAATGCATATTGTTTTAGAGCGTGCTTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTccc > 1:278835/1‑99 (MQ=255) cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCTCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTcccc < 2:1626678/100‑1 (MQ=255) cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTcccc > 2:1382267/1‑100 (MQ=255) cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTcc > 2:751016/1‑98 (MQ=255) cTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGa > 1:1882937/1‑100 (MQ=255) tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTCTTTTCCCCGa > 1:2537116/1‑99 (MQ=255) tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAg > 1:421971/1‑100 (MQ=255) tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTACCCGAg > 1:2537124/1‑100 (MQ=255) gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTTCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc < 2:1467203/100‑1 (MQ=255) gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc > 2:2513010/1‑100 (MQ=255) cAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCa < 2:2031957/100‑1 (MQ=255) aaaaaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCaa < 1:416674/100‑1 (MQ=255) aaaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAAtt < 1:1537002/100‑1 (MQ=255) aaTGCCTATTGTCTTCGAGCGTGATTATTACATGGCAGGGTAGTTCCCTGCTGTCTCATTTATTTCAGATTCTTTCTAATTCTGTCcccctttcaatgac < 2:2537093/100‑11 (MQ=255) aaTGCATATTCTTTTCGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTat < 2:2537085/100‑2 (MQ=255) aTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACg < 1:2495515/100‑1 (MQ=255) tGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGt < 2:249302/100‑1 (MQ=255) tGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGt < 2:2897491/100‑1 (MQ=255) gCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTg > 1:1699213/1‑100 (MQ=255) cATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTgg > 1:937810/1‑100 (MQ=255) cATATTGTTTTAGAGCGTGATTATTAGCTGGCAAGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGttg > 2:1693558/1‑98 (MQ=255) atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc > 1:352755/1‑100 (MQ=255) atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc < 1:1141246/100‑1 (MQ=255) atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCACTGCTGTTTCATTTATTTCAGATTCTTTATAATTATTTTCCCCGAGCAATTACGTgg < 2:1362834/99‑1 (MQ=255) atatTGTTTTAGAGCGTGATCATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc > 2:1853122/1‑100 (MQ=255) atTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAg > 2:1456677/1‑100 (MQ=255) tGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGAt > 2:1973196/1‑100 (MQ=255) agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCtttt > 2:1058111/1‑99 (MQ=255) agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTc < 1:229574/100‑1 (MQ=255) agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTc < 1:226903/100‑1 (MQ=255) agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTc < 1:534066/100‑1 (MQ=255) agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTc < 1:2018081/100‑1 (MQ=255) gagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCt < 1:2318021/100‑1 (MQ=255) gagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTATAATTATTTTCCTCGAGCAATTACGTGGCAGATCtttt > 2:2076531/1‑98 (MQ=255) | GCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCT > NC_000913/36136‑36327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |